BLASTX nr result

ID: Coptis21_contig00011118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011118
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263321.1| PREDICTED: protoporphyrinogen oxidase, mitoc...    59   3e-07
ref|XP_002298607.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_002509548.1| amine oxidase, putative [Ricinus communis] g...    59   4e-07
gb|AFK39366.1| unknown [Lotus japonicus]                               56   3e-06
ref|XP_003622202.1| Protoporphyrinogen oxidase [Medicago truncat...    56   3e-06

>ref|XP_002263321.1| PREDICTED: protoporphyrinogen oxidase, mitochondrial [Vitis
           vinifera] gi|296090240|emb|CBI40059.3| unnamed protein
           product [Vitis vinifera]
          Length = 508

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = +3

Query: 3   NHRGGLSVDNALASGCKAADLVISYLNSSSEDKLHLE 113
           NH+GGLSV  A+ASGCKAADLVISYLNSSS+ K+  E
Sbjct: 472 NHKGGLSVGKAIASGCKAADLVISYLNSSSDGKMFKE 508


>ref|XP_002298607.1| predicted protein [Populus trichocarpa] gi|222845865|gb|EEE83412.1|
           predicted protein [Populus trichocarpa]
          Length = 482

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/34 (79%), Positives = 32/34 (94%)
 Frame = +3

Query: 3   NHRGGLSVDNALASGCKAADLVISYLNSSSEDKL 104
           NHRGGLSV  A+ASGCKAADLVIS+LNSS++DK+
Sbjct: 442 NHRGGLSVGKAIASGCKAADLVISHLNSSADDKM 475


>ref|XP_002509548.1| amine oxidase, putative [Ricinus communis]
           gi|223549447|gb|EEF50935.1| amine oxidase, putative
           [Ricinus communis]
          Length = 511

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/34 (79%), Positives = 31/34 (91%)
 Frame = +3

Query: 3   NHRGGLSVDNALASGCKAADLVISYLNSSSEDKL 104
           NH+GGLSV  A+ASGCKAADLVISYL SSS+DK+
Sbjct: 471 NHKGGLSVGKAIASGCKAADLVISYLESSSDDKM 504


>gb|AFK39366.1| unknown [Lotus japonicus]
          Length = 106

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = +3

Query: 3   NHRGGLSVDNALASGCKAADLVISYLNSSSE 95
           NHRGGLSV  A+ASGCKAADLVISYLN++SE
Sbjct: 70  NHRGGLSVGKAIASGCKAADLVISYLNNASE 100


>ref|XP_003622202.1| Protoporphyrinogen oxidase [Medicago truncatula]
           gi|355497217|gb|AES78420.1| Protoporphyrinogen oxidase
           [Medicago truncatula]
          Length = 499

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/34 (73%), Positives = 31/34 (91%)
 Frame = +3

Query: 3   NHRGGLSVDNALASGCKAADLVISYLNSSSEDKL 104
           NHRGGLSV  A+ASGCKAADLVISYLN++S++ +
Sbjct: 466 NHRGGLSVGRAIASGCKAADLVISYLNNASDNSV 499


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