BLASTX nr result
ID: Coptis21_contig00011118
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00011118 (440 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002263321.1| PREDICTED: protoporphyrinogen oxidase, mitoc... 59 3e-07 ref|XP_002298607.1| predicted protein [Populus trichocarpa] gi|2... 59 3e-07 ref|XP_002509548.1| amine oxidase, putative [Ricinus communis] g... 59 4e-07 gb|AFK39366.1| unknown [Lotus japonicus] 56 3e-06 ref|XP_003622202.1| Protoporphyrinogen oxidase [Medicago truncat... 56 3e-06 >ref|XP_002263321.1| PREDICTED: protoporphyrinogen oxidase, mitochondrial [Vitis vinifera] gi|296090240|emb|CBI40059.3| unnamed protein product [Vitis vinifera] Length = 508 Score = 59.3 bits (142), Expect = 3e-07 Identities = 28/37 (75%), Positives = 32/37 (86%) Frame = +3 Query: 3 NHRGGLSVDNALASGCKAADLVISYLNSSSEDKLHLE 113 NH+GGLSV A+ASGCKAADLVISYLNSSS+ K+ E Sbjct: 472 NHKGGLSVGKAIASGCKAADLVISYLNSSSDGKMFKE 508 >ref|XP_002298607.1| predicted protein [Populus trichocarpa] gi|222845865|gb|EEE83412.1| predicted protein [Populus trichocarpa] Length = 482 Score = 59.3 bits (142), Expect = 3e-07 Identities = 27/34 (79%), Positives = 32/34 (94%) Frame = +3 Query: 3 NHRGGLSVDNALASGCKAADLVISYLNSSSEDKL 104 NHRGGLSV A+ASGCKAADLVIS+LNSS++DK+ Sbjct: 442 NHRGGLSVGKAIASGCKAADLVISHLNSSADDKM 475 >ref|XP_002509548.1| amine oxidase, putative [Ricinus communis] gi|223549447|gb|EEF50935.1| amine oxidase, putative [Ricinus communis] Length = 511 Score = 58.9 bits (141), Expect = 4e-07 Identities = 27/34 (79%), Positives = 31/34 (91%) Frame = +3 Query: 3 NHRGGLSVDNALASGCKAADLVISYLNSSSEDKL 104 NH+GGLSV A+ASGCKAADLVISYL SSS+DK+ Sbjct: 471 NHKGGLSVGKAIASGCKAADLVISYLESSSDDKM 504 >gb|AFK39366.1| unknown [Lotus japonicus] Length = 106 Score = 56.2 bits (134), Expect = 3e-06 Identities = 26/31 (83%), Positives = 29/31 (93%) Frame = +3 Query: 3 NHRGGLSVDNALASGCKAADLVISYLNSSSE 95 NHRGGLSV A+ASGCKAADLVISYLN++SE Sbjct: 70 NHRGGLSVGKAIASGCKAADLVISYLNNASE 100 >ref|XP_003622202.1| Protoporphyrinogen oxidase [Medicago truncatula] gi|355497217|gb|AES78420.1| Protoporphyrinogen oxidase [Medicago truncatula] Length = 499 Score = 55.8 bits (133), Expect = 3e-06 Identities = 25/34 (73%), Positives = 31/34 (91%) Frame = +3 Query: 3 NHRGGLSVDNALASGCKAADLVISYLNSSSEDKL 104 NHRGGLSV A+ASGCKAADLVISYLN++S++ + Sbjct: 466 NHRGGLSVGRAIASGCKAADLVISYLNNASDNSV 499