BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011108
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275839.1| PREDICTED: gamma-tubulin complex component 3...    68   9e-10
ref|XP_004161669.1| PREDICTED: LOW QUALITY PROTEIN: gamma-tubuli...    65   8e-09
ref|XP_004144694.1| PREDICTED: gamma-tubulin complex component 3...    65   8e-09
ref|XP_002532346.1| gamma-tubulin complex component, putative [R...    61   8e-08
emb|CBI29999.3| unnamed protein product [Vitis vinifera]               60   1e-07

>ref|XP_002275839.1| PREDICTED: gamma-tubulin complex component 3 homolog [Vitis
           vinifera]
          Length = 854

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 49/131 (37%), Positives = 72/131 (54%), Gaps = 4/131 (3%)
 Frame = -1

Query: 424 LSSNTEMPLETFTEAEANSEKTLKHSMRILTSRMKTPSTSVDESSMTEPIK--LLNEGKS 251
           LS N + P      +  +++K+L++++RIL+S M TPS + D +++ E IK  L  +GKS
Sbjct: 19  LSQNPQNP-----SSSIDTQKSLRYAIRILSSLM-TPSIAPDSAAIAESIKRQLATQGKS 72

Query: 250 SCRLTFVDSYVIVSSKNGIDSVRNKWGLLE--XXXXXXXXXXXXXSDYRGSSGFASAFNC 77
           S  L F D Y   +SKNG  S+ NKW +L                SD R SSGF+++   
Sbjct: 73  SQALAFADLYTKFASKNGPGSIENKWAVLYLLKVISEDRKNQKSRSDSRVSSGFSASVG- 131

Query: 76  ELPVLFDGKCG 44
            LP LFD + G
Sbjct: 132 -LPALFDAESG 141


>ref|XP_004161669.1| PREDICTED: LOW QUALITY PROTEIN: gamma-tubulin complex component
           3-like [Cucumis sativus]
          Length = 846

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
 Frame = -1

Query: 403 PLETFTEAEANSEKTLKHSMRILTSRMKTPSTSVDESSMTEPIK--LLNEGKSSCRLTFV 230
           P    +   ++ +K+L++++RILTSRM TPS + D +++ E IK  L  EGKSS  LTF 
Sbjct: 25  PTSNSSPTSSDFQKSLRYAIRILTSRM-TPSIAPDAAAIAESIKRRLATEGKSSQALTFA 83

Query: 229 DSYVIVSSKNGIDSVRNKWGLL 164
           D Y   +SK G  SV NKW +L
Sbjct: 84  DLYTKFASKTGPGSVNNKWAVL 105


>ref|XP_004144694.1| PREDICTED: gamma-tubulin complex component 3-like [Cucumis sativus]
          Length = 846

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
 Frame = -1

Query: 403 PLETFTEAEANSEKTLKHSMRILTSRMKTPSTSVDESSMTEPIK--LLNEGKSSCRLTFV 230
           P    +   ++ +K+L++++RILTSRM TPS + D +++ E IK  L  EGKSS  LTF 
Sbjct: 25  PTSNSSPTSSDFQKSLRYAIRILTSRM-TPSIAPDAAAIAESIKRRLATEGKSSQALTFA 83

Query: 229 DSYVIVSSKNGIDSVRNKWGLL 164
           D Y   +SK G  SV NKW +L
Sbjct: 84  DLYTKFASKTGPGSVNNKWAVL 105


>ref|XP_002532346.1| gamma-tubulin complex component, putative [Ricinus communis]
           gi|223527963|gb|EEF30048.1| gamma-tubulin complex
           component, putative [Ricinus communis]
          Length = 855

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
 Frame = -1

Query: 424 LSSNTEMPLETFTEAEANSEKTLKHSMRILTSRMKTPSTSVDESSMTEPIK--LLNEGKS 251
           LS N             + +  L++++RIL+SR+ TPS S D +++ E IK  L  +GKS
Sbjct: 21  LSQNPNFKTPNSNPNSTDFQNALRYAVRILSSRL-TPSISPDSAAIAESIKRRLATQGKS 79

Query: 250 SCRLTFVDSYVIVSSKNGIDSVRNKWGLL 164
           S  LTF D Y   +SKNG  SV NKW +L
Sbjct: 80  SQALTFADLYNKFASKNGPGSVNNKWAVL 108


>emb|CBI29999.3| unnamed protein product [Vitis vinifera]
          Length = 777

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
 Frame = -1

Query: 424 LSSNTEMPLETFTEAEANSEKTLKHSMRILTSRMKTPSTSVDESSMTEPIK--LLNEGKS 251
           LS N + P      +  +++K+L++++RIL+S M TPS + D +++ E IK  L  +GKS
Sbjct: 19  LSQNPQNP-----SSSIDTQKSLRYAIRILSSLM-TPSIAPDSAAIAESIKRQLATQGKS 72

Query: 250 SCRLTFVDSYVIVSSKNGIDSVRNKWGLL 164
           S  L F D Y   +SKNG  S+ NKW +L
Sbjct: 73  SQALAFADLYTKFASKNGPGSIENKWAVL 101