BLASTX nr result
ID: Coptis21_contig00011107
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00011107 (527 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFX72883.1| MADS-box protein AGL12 [Aquilegia coerulea] 52 4e-11 dbj|BAB70740.2| putative MADS-domain transcription factor MpMADS... 42 7e-07 >gb|AFX72883.1| MADS-box protein AGL12 [Aquilegia coerulea] Length = 234 Score = 52.4 bits (124), Expect(2) = 4e-11 Identities = 26/47 (55%), Positives = 31/47 (65%) Frame = +1 Query: 1 LLQRXXXXXXXXXXXXXXLNELDLLEKHLETWIHNIRSTKMEMMSQE 141 LLQ+ ++ELDLLEKHLE WIHNIRSTK+E+M QE Sbjct: 137 LLQKGLRYTFGGGSGNMTVDELDLLEKHLEIWIHNIRSTKIEIMFQE 183 Score = 40.0 bits (92), Expect(2) = 4e-11 Identities = 17/30 (56%), Positives = 20/30 (66%) Frame = +3 Query: 198 IGEQFAVFNVPPNITEIPYQLTIPNGLFNF 287 I EQ V N+PP + YQLTIPN +FNF Sbjct: 205 IEEQCGVLNIPPTVAGCSYQLTIPNEIFNF 234 >dbj|BAB70740.2| putative MADS-domain transcription factor MpMADS5 [Magnolia praecocissima] Length = 204 Score = 42.4 bits (98), Expect(2) = 7e-07 Identities = 21/47 (44%), Positives = 28/47 (59%) Frame = +1 Query: 1 LLQRXXXXXXXXXXXXXXLNELDLLEKHLETWIHNIRSTKMEMMSQE 141 LLQ+ ++EL LE+HLE WI++IRSTKM +M QE Sbjct: 103 LLQKGLRNSIGGGMGNMTMDELHALERHLELWIYHIRSTKMRIMIQE 149 Score = 35.8 bits (81), Expect(2) = 7e-07 Identities = 16/28 (57%), Positives = 20/28 (71%) Frame = +3 Query: 198 IGEQFAVFNVPPNITEIPYQLTIPNGLF 281 I EQ +F++PP I IPY LTIPN +F Sbjct: 171 IEEQNVIFDMPPMIGGIPYPLTIPNEIF 198