BLASTX nr result

ID: Coptis21_contig00011107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011107
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFX72883.1| MADS-box protein AGL12 [Aquilegia coerulea]             52   4e-11
dbj|BAB70740.2| putative MADS-domain transcription factor MpMADS...    42   7e-07

>gb|AFX72883.1| MADS-box protein AGL12 [Aquilegia coerulea]
          Length = 234

 Score = 52.4 bits (124), Expect(2) = 4e-11
 Identities = 26/47 (55%), Positives = 31/47 (65%)
 Frame = +1

Query: 1   LLQRXXXXXXXXXXXXXXLNELDLLEKHLETWIHNIRSTKMEMMSQE 141
           LLQ+              ++ELDLLEKHLE WIHNIRSTK+E+M QE
Sbjct: 137 LLQKGLRYTFGGGSGNMTVDELDLLEKHLEIWIHNIRSTKIEIMFQE 183



 Score = 40.0 bits (92), Expect(2) = 4e-11
 Identities = 17/30 (56%), Positives = 20/30 (66%)
 Frame = +3

Query: 198 IGEQFAVFNVPPNITEIPYQLTIPNGLFNF 287
           I EQ  V N+PP +    YQLTIPN +FNF
Sbjct: 205 IEEQCGVLNIPPTVAGCSYQLTIPNEIFNF 234


>dbj|BAB70740.2| putative MADS-domain transcription factor MpMADS5 [Magnolia
           praecocissima]
          Length = 204

 Score = 42.4 bits (98), Expect(2) = 7e-07
 Identities = 21/47 (44%), Positives = 28/47 (59%)
 Frame = +1

Query: 1   LLQRXXXXXXXXXXXXXXLNELDLLEKHLETWIHNIRSTKMEMMSQE 141
           LLQ+              ++EL  LE+HLE WI++IRSTKM +M QE
Sbjct: 103 LLQKGLRNSIGGGMGNMTMDELHALERHLELWIYHIRSTKMRIMIQE 149



 Score = 35.8 bits (81), Expect(2) = 7e-07
 Identities = 16/28 (57%), Positives = 20/28 (71%)
 Frame = +3

Query: 198 IGEQFAVFNVPPNITEIPYQLTIPNGLF 281
           I EQ  +F++PP I  IPY LTIPN +F
Sbjct: 171 IEEQNVIFDMPPMIGGIPYPLTIPNEIF 198


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