BLASTX nr result
ID: Coptis21_contig00011105
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00011105 (443 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 226 1e-57 ref|XP_002870205.1| hypothetical protein ARALYDRAFT_493299 [Arab... 222 2e-56 ref|NP_193320.6| RNA helicase 1 [Arabidopsis thaliana] gi|334302... 222 3e-56 emb|CAA72041.1| DEAD box-like RNA helicase [Arabidopsis thaliana] 222 3e-56 emb|CAB45993.1| ATP-dependent RNA helicase like protein [Arabido... 222 3e-56 >ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1 [Vitis vinifera] gi|297740757|emb|CBI30939.3| unnamed protein product [Vitis vinifera] Length = 516 Score = 226 bits (577), Expect = 1e-57 Identities = 112/147 (76%), Positives = 124/147 (84%) Frame = -1 Query: 443 GVCYDLEGQGVELQSSVDILVATPGRLMDHINTTKGFTLEHLRYLVVDETDRLLREAYQS 264 G+CYD E +ELQSSVDILVATPGRLMDHINTTKGFTL+HLRYLVVDETDRLLREAYQS Sbjct: 158 GICYDPEDISLELQSSVDILVATPGRLMDHINTTKGFTLKHLRYLVVDETDRLLREAYQS 217 Query: 263 WLPTVLQLTQSDKEDIFSHAKTFPHCMFGSLKTTRKSGVERGFKGKTYPRLVKMVLSATL 84 WLPTVLQLT+S E +F KT FGS+ T R+ GVERGFKG++YPRLVK+VLSATL Sbjct: 218 WLPTVLQLTRSSDESLFPCGKTILPSTFGSMNTIRRCGVERGFKGRSYPRLVKIVLSATL 277 Query: 83 THDPSKLSQLDLHHPLFLTTGSQRYQL 3 T DPSKL+ LDLHHPL LT G +RYQL Sbjct: 278 TQDPSKLALLDLHHPLLLTAGQRRYQL 304 >ref|XP_002870205.1| hypothetical protein ARALYDRAFT_493299 [Arabidopsis lyrata subsp. lyrata] gi|297316041|gb|EFH46464.1| hypothetical protein ARALYDRAFT_493299 [Arabidopsis lyrata subsp. lyrata] Length = 522 Score = 222 bits (566), Expect = 2e-56 Identities = 109/147 (74%), Positives = 119/147 (80%) Frame = -1 Query: 443 GVCYDLEGQGVELQSSVDILVATPGRLMDHINTTKGFTLEHLRYLVVDETDRLLREAYQS 264 G+CYD E +S+VDILVATPGRLMDHIN TKGFTLEHLRYLVVDETDRLLREAYQS Sbjct: 160 GICYDPEDLSQNFESAVDILVATPGRLMDHINNTKGFTLEHLRYLVVDETDRLLREAYQS 219 Query: 263 WLPTVLQLTQSDKEDIFSHAKTFPHCMFGSLKTTRKSGVERGFKGKTYPRLVKMVLSATL 84 WLPTVLQLTQ+ + +F F FGSL+T R+ VERGFKGK YPRLVKMVLSATL Sbjct: 220 WLPTVLQLTQTSDDGLFPSCTPFVPSAFGSLRTVRRQSVERGFKGKPYPRLVKMVLSATL 279 Query: 83 THDPSKLSQLDLHHPLFLTTGSQRYQL 3 T DPSKL QLDLHHPLF+TTG RY+L Sbjct: 280 TQDPSKLIQLDLHHPLFMTTGGSRYRL 306 >ref|NP_193320.6| RNA helicase 1 [Arabidopsis thaliana] gi|334302879|sp|Q7FGZ2.3|RH1_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 1 gi|332658259|gb|AEE83659.1| RNA helicase 1 [Arabidopsis thaliana] Length = 522 Score = 222 bits (565), Expect = 3e-56 Identities = 109/147 (74%), Positives = 120/147 (81%) Frame = -1 Query: 443 GVCYDLEGQGVELQSSVDILVATPGRLMDHINTTKGFTLEHLRYLVVDETDRLLREAYQS 264 G+CYD + L+S+VDILVATPGRLMDHIN TKGFTLEHLRYLVVDETDRLLREAYQS Sbjct: 160 GICYDPDDLSQNLESAVDILVATPGRLMDHINNTKGFTLEHLRYLVVDETDRLLREAYQS 219 Query: 263 WLPTVLQLTQSDKEDIFSHAKTFPHCMFGSLKTTRKSGVERGFKGKTYPRLVKMVLSATL 84 WLPTVLQLTQ+ + +F F FGSL+T R+ VERGFKGK YPRLVKMVLSATL Sbjct: 220 WLPTVLQLTQTSDDSLFPSFTPFVPSAFGSLQTVRRQSVERGFKGKPYPRLVKMVLSATL 279 Query: 83 THDPSKLSQLDLHHPLFLTTGSQRYQL 3 T DPSKL QLDLHHPLF+TTG RY+L Sbjct: 280 TQDPSKLIQLDLHHPLFMTTGGSRYRL 306 >emb|CAA72041.1| DEAD box-like RNA helicase [Arabidopsis thaliana] Length = 450 Score = 222 bits (565), Expect = 3e-56 Identities = 109/147 (74%), Positives = 120/147 (81%) Frame = -1 Query: 443 GVCYDLEGQGVELQSSVDILVATPGRLMDHINTTKGFTLEHLRYLVVDETDRLLREAYQS 264 G+CYD + L+S+VDILVATPGRLMDHIN TKGFTLEHLRYLVVDETDRLLREAYQS Sbjct: 88 GICYDPDDLSQNLESAVDILVATPGRLMDHINNTKGFTLEHLRYLVVDETDRLLREAYQS 147 Query: 263 WLPTVLQLTQSDKEDIFSHAKTFPHCMFGSLKTTRKSGVERGFKGKTYPRLVKMVLSATL 84 WLPTVLQLTQ+ + +F F FGSL+T R+ VERGFKGK YPRLVKMVLSATL Sbjct: 148 WLPTVLQLTQTSDDSLFPSFTPFVPSAFGSLQTVRRQSVERGFKGKPYPRLVKMVLSATL 207 Query: 83 THDPSKLSQLDLHHPLFLTTGSQRYQL 3 T DPSKL QLDLHHPLF+TTG RY+L Sbjct: 208 TQDPSKLIQLDLHHPLFMTTGGSRYRL 234 >emb|CAB45993.1| ATP-dependent RNA helicase like protein [Arabidopsis thaliana] gi|7268333|emb|CAB78627.1| ATP-dependent RNA helicase like protein [Arabidopsis thaliana] Length = 474 Score = 222 bits (565), Expect = 3e-56 Identities = 109/147 (74%), Positives = 120/147 (81%) Frame = -1 Query: 443 GVCYDLEGQGVELQSSVDILVATPGRLMDHINTTKGFTLEHLRYLVVDETDRLLREAYQS 264 G+CYD + L+S+VDILVATPGRLMDHIN TKGFTLEHLRYLVVDETDRLLREAYQS Sbjct: 112 GICYDPDDLSQNLESAVDILVATPGRLMDHINNTKGFTLEHLRYLVVDETDRLLREAYQS 171 Query: 263 WLPTVLQLTQSDKEDIFSHAKTFPHCMFGSLKTTRKSGVERGFKGKTYPRLVKMVLSATL 84 WLPTVLQLTQ+ + +F F FGSL+T R+ VERGFKGK YPRLVKMVLSATL Sbjct: 172 WLPTVLQLTQTSDDSLFPSFTPFVPSAFGSLQTVRRQSVERGFKGKPYPRLVKMVLSATL 231 Query: 83 THDPSKLSQLDLHHPLFLTTGSQRYQL 3 T DPSKL QLDLHHPLF+TTG RY+L Sbjct: 232 TQDPSKLIQLDLHHPLFMTTGGSRYRL 258