BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011105
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   226   1e-57
ref|XP_002870205.1| hypothetical protein ARALYDRAFT_493299 [Arab...   222   2e-56
ref|NP_193320.6| RNA helicase 1 [Arabidopsis thaliana] gi|334302...   222   3e-56
emb|CAA72041.1| DEAD box-like RNA helicase [Arabidopsis thaliana]     222   3e-56
emb|CAB45993.1| ATP-dependent RNA helicase like protein [Arabido...   222   3e-56

>ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1 [Vitis vinifera]
           gi|297740757|emb|CBI30939.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score =  226 bits (577), Expect = 1e-57
 Identities = 112/147 (76%), Positives = 124/147 (84%)
 Frame = -1

Query: 443 GVCYDLEGQGVELQSSVDILVATPGRLMDHINTTKGFTLEHLRYLVVDETDRLLREAYQS 264
           G+CYD E   +ELQSSVDILVATPGRLMDHINTTKGFTL+HLRYLVVDETDRLLREAYQS
Sbjct: 158 GICYDPEDISLELQSSVDILVATPGRLMDHINTTKGFTLKHLRYLVVDETDRLLREAYQS 217

Query: 263 WLPTVLQLTQSDKEDIFSHAKTFPHCMFGSLKTTRKSGVERGFKGKTYPRLVKMVLSATL 84
           WLPTVLQLT+S  E +F   KT     FGS+ T R+ GVERGFKG++YPRLVK+VLSATL
Sbjct: 218 WLPTVLQLTRSSDESLFPCGKTILPSTFGSMNTIRRCGVERGFKGRSYPRLVKIVLSATL 277

Query: 83  THDPSKLSQLDLHHPLFLTTGSQRYQL 3
           T DPSKL+ LDLHHPL LT G +RYQL
Sbjct: 278 TQDPSKLALLDLHHPLLLTAGQRRYQL 304


>ref|XP_002870205.1| hypothetical protein ARALYDRAFT_493299 [Arabidopsis lyrata subsp.
           lyrata] gi|297316041|gb|EFH46464.1| hypothetical protein
           ARALYDRAFT_493299 [Arabidopsis lyrata subsp. lyrata]
          Length = 522

 Score =  222 bits (566), Expect = 2e-56
 Identities = 109/147 (74%), Positives = 119/147 (80%)
 Frame = -1

Query: 443 GVCYDLEGQGVELQSSVDILVATPGRLMDHINTTKGFTLEHLRYLVVDETDRLLREAYQS 264
           G+CYD E      +S+VDILVATPGRLMDHIN TKGFTLEHLRYLVVDETDRLLREAYQS
Sbjct: 160 GICYDPEDLSQNFESAVDILVATPGRLMDHINNTKGFTLEHLRYLVVDETDRLLREAYQS 219

Query: 263 WLPTVLQLTQSDKEDIFSHAKTFPHCMFGSLKTTRKSGVERGFKGKTYPRLVKMVLSATL 84
           WLPTVLQLTQ+  + +F     F    FGSL+T R+  VERGFKGK YPRLVKMVLSATL
Sbjct: 220 WLPTVLQLTQTSDDGLFPSCTPFVPSAFGSLRTVRRQSVERGFKGKPYPRLVKMVLSATL 279

Query: 83  THDPSKLSQLDLHHPLFLTTGSQRYQL 3
           T DPSKL QLDLHHPLF+TTG  RY+L
Sbjct: 280 TQDPSKLIQLDLHHPLFMTTGGSRYRL 306


>ref|NP_193320.6| RNA helicase 1 [Arabidopsis thaliana]
           gi|334302879|sp|Q7FGZ2.3|RH1_ARATH RecName:
           Full=DEAD-box ATP-dependent RNA helicase 1
           gi|332658259|gb|AEE83659.1| RNA helicase 1 [Arabidopsis
           thaliana]
          Length = 522

 Score =  222 bits (565), Expect = 3e-56
 Identities = 109/147 (74%), Positives = 120/147 (81%)
 Frame = -1

Query: 443 GVCYDLEGQGVELQSSVDILVATPGRLMDHINTTKGFTLEHLRYLVVDETDRLLREAYQS 264
           G+CYD +     L+S+VDILVATPGRLMDHIN TKGFTLEHLRYLVVDETDRLLREAYQS
Sbjct: 160 GICYDPDDLSQNLESAVDILVATPGRLMDHINNTKGFTLEHLRYLVVDETDRLLREAYQS 219

Query: 263 WLPTVLQLTQSDKEDIFSHAKTFPHCMFGSLKTTRKSGVERGFKGKTYPRLVKMVLSATL 84
           WLPTVLQLTQ+  + +F     F    FGSL+T R+  VERGFKGK YPRLVKMVLSATL
Sbjct: 220 WLPTVLQLTQTSDDSLFPSFTPFVPSAFGSLQTVRRQSVERGFKGKPYPRLVKMVLSATL 279

Query: 83  THDPSKLSQLDLHHPLFLTTGSQRYQL 3
           T DPSKL QLDLHHPLF+TTG  RY+L
Sbjct: 280 TQDPSKLIQLDLHHPLFMTTGGSRYRL 306


>emb|CAA72041.1| DEAD box-like RNA helicase [Arabidopsis thaliana]
          Length = 450

 Score =  222 bits (565), Expect = 3e-56
 Identities = 109/147 (74%), Positives = 120/147 (81%)
 Frame = -1

Query: 443 GVCYDLEGQGVELQSSVDILVATPGRLMDHINTTKGFTLEHLRYLVVDETDRLLREAYQS 264
           G+CYD +     L+S+VDILVATPGRLMDHIN TKGFTLEHLRYLVVDETDRLLREAYQS
Sbjct: 88  GICYDPDDLSQNLESAVDILVATPGRLMDHINNTKGFTLEHLRYLVVDETDRLLREAYQS 147

Query: 263 WLPTVLQLTQSDKEDIFSHAKTFPHCMFGSLKTTRKSGVERGFKGKTYPRLVKMVLSATL 84
           WLPTVLQLTQ+  + +F     F    FGSL+T R+  VERGFKGK YPRLVKMVLSATL
Sbjct: 148 WLPTVLQLTQTSDDSLFPSFTPFVPSAFGSLQTVRRQSVERGFKGKPYPRLVKMVLSATL 207

Query: 83  THDPSKLSQLDLHHPLFLTTGSQRYQL 3
           T DPSKL QLDLHHPLF+TTG  RY+L
Sbjct: 208 TQDPSKLIQLDLHHPLFMTTGGSRYRL 234


>emb|CAB45993.1| ATP-dependent RNA helicase like protein [Arabidopsis thaliana]
           gi|7268333|emb|CAB78627.1| ATP-dependent RNA helicase
           like protein [Arabidopsis thaliana]
          Length = 474

 Score =  222 bits (565), Expect = 3e-56
 Identities = 109/147 (74%), Positives = 120/147 (81%)
 Frame = -1

Query: 443 GVCYDLEGQGVELQSSVDILVATPGRLMDHINTTKGFTLEHLRYLVVDETDRLLREAYQS 264
           G+CYD +     L+S+VDILVATPGRLMDHIN TKGFTLEHLRYLVVDETDRLLREAYQS
Sbjct: 112 GICYDPDDLSQNLESAVDILVATPGRLMDHINNTKGFTLEHLRYLVVDETDRLLREAYQS 171

Query: 263 WLPTVLQLTQSDKEDIFSHAKTFPHCMFGSLKTTRKSGVERGFKGKTYPRLVKMVLSATL 84
           WLPTVLQLTQ+  + +F     F    FGSL+T R+  VERGFKGK YPRLVKMVLSATL
Sbjct: 172 WLPTVLQLTQTSDDSLFPSFTPFVPSAFGSLQTVRRQSVERGFKGKPYPRLVKMVLSATL 231

Query: 83  THDPSKLSQLDLHHPLFLTTGSQRYQL 3
           T DPSKL QLDLHHPLF+TTG  RY+L
Sbjct: 232 TQDPSKLIQLDLHHPLFMTTGGSRYRL 258