BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011104
         (203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-18
ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    85   1e-17
ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    84   1e-16
ref|XP_002870205.1| hypothetical protein ARALYDRAFT_493299 [Arab...    79   2e-15
ref|NP_193320.6| RNA helicase 1 [Arabidopsis thaliana] gi|334302...    79   3e-15

>ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|222848405|gb|EEE85952.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score = 86.3 bits (212), Expect(2) = 3e-18
 Identities = 41/52 (78%), Positives = 46/52 (88%)
 Frame = +2

Query: 47  RLVKMLLSATLTHDPSKLSQLDLHHPFFLTTGSQRYQ*PEKLKSYKLICESK 202
           RL KM+LSATLT DPSKL+QL+LHHP FLTTG +RYQ PEKL+SYKLIC SK
Sbjct: 270 RLAKMVLSATLTQDPSKLAQLNLHHPLFLTTGQRRYQLPEKLESYKLICVSK 321



 Score = 30.0 bits (66), Expect(2) = 3e-18
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = +1

Query: 1   GSLKTTRKSGVERGFK 48
           GSLKT R+ GVERGFK
Sbjct: 249 GSLKTIRRCGVERGFK 264


>ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus] gi|449490565|ref|XP_004158642.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus]
          Length = 517

 Score = 84.7 bits (208), Expect(2) = 1e-17
 Identities = 39/52 (75%), Positives = 45/52 (86%)
 Frame = +2

Query: 47  RLVKMLLSATLTHDPSKLSQLDLHHPFFLTTGSQRYQ*PEKLKSYKLICESK 202
           RL KM+LSATLT DP KL+QLDLHHP FLTTG +RY+ PEKL+SY +ICESK
Sbjct: 267 RLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKRRYKLPEKLESYMMICESK 318



 Score = 29.6 bits (65), Expect(2) = 1e-17
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = +1

Query: 1   GSLKTTRKSGVERGFK 48
           GSLKT R+ GVERGFK
Sbjct: 246 GSLKTIRRFGVERGFK 261


>ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1 [Vitis vinifera]
           gi|297740757|emb|CBI30939.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score = 84.0 bits (206), Expect(2) = 1e-16
 Identities = 40/52 (76%), Positives = 45/52 (86%)
 Frame = +2

Query: 47  RLVKMLLSATLTHDPSKLSQLDLHHPFFLTTGSQRYQ*PEKLKSYKLICESK 202
           RLVK++LSATLT DPSKL+ LDLHHP  LT G +RYQ PEKLKS+KLICESK
Sbjct: 267 RLVKIVLSATLTQDPSKLALLDLHHPLLLTAGQRRYQLPEKLKSFKLICESK 318



 Score = 27.3 bits (59), Expect(2) = 1e-16
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +1

Query: 1   GSLKTTRKSGVERGFK 48
           GS+ T R+ GVERGFK
Sbjct: 246 GSMNTIRRCGVERGFK 261


>ref|XP_002870205.1| hypothetical protein ARALYDRAFT_493299 [Arabidopsis lyrata subsp.
           lyrata] gi|297316041|gb|EFH46464.1| hypothetical protein
           ARALYDRAFT_493299 [Arabidopsis lyrata subsp. lyrata]
          Length = 522

 Score = 79.3 bits (194), Expect(2) = 2e-15
 Identities = 37/51 (72%), Positives = 43/51 (84%)
 Frame = +2

Query: 47  RLVKMLLSATLTHDPSKLSQLDLHHPFFLTTGSQRYQ*PEKLKSYKLICES 199
           RLVKM+LSATLT DPSKL QLDLHHP F+TTG  RY+ PEKL+  +LICE+
Sbjct: 269 RLVKMVLSATLTQDPSKLIQLDLHHPLFMTTGGSRYRLPEKLECLRLICET 319



 Score = 27.3 bits (59), Expect(2) = 2e-15
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +1

Query: 1   GSLKTTRKSGVERGFK 48
           GSL+T R+  VERGFK
Sbjct: 248 GSLRTVRRQSVERGFK 263


>ref|NP_193320.6| RNA helicase 1 [Arabidopsis thaliana]
           gi|334302879|sp|Q7FGZ2.3|RH1_ARATH RecName:
           Full=DEAD-box ATP-dependent RNA helicase 1
           gi|332658259|gb|AEE83659.1| RNA helicase 1 [Arabidopsis
           thaliana]
          Length = 522

 Score = 79.3 bits (194), Expect(2) = 3e-15
 Identities = 37/51 (72%), Positives = 43/51 (84%)
 Frame = +2

Query: 47  RLVKMLLSATLTHDPSKLSQLDLHHPFFLTTGSQRYQ*PEKLKSYKLICES 199
           RLVKM+LSATLT DPSKL QLDLHHP F+TTG  RY+ PEKL+  +LICE+
Sbjct: 269 RLVKMVLSATLTQDPSKLIQLDLHHPLFMTTGGSRYRLPEKLECLRLICET 319



 Score = 26.9 bits (58), Expect(2) = 3e-15
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +1

Query: 1   GSLKTTRKSGVERGFK 48
           GSL+T R+  VERGFK
Sbjct: 248 GSLQTVRRQSVERGFK 263