BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011097
         (1053 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18267.3| unnamed protein product [Vitis vinifera]              188   2e-45
ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helica...   188   2e-45
ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helica...   187   5e-45
ref|XP_002514451.1| ATP-dependent RNA helicase, putative [Ricinu...   183   7e-44
ref|XP_004162736.1| PREDICTED: probable ATP-dependent RNA helica...   179   8e-43

>emb|CBI18267.3| unnamed protein product [Vitis vinifera]
          Length = 1162

 Score =  188 bits (477), Expect = 2e-45
 Identities = 95/117 (81%), Positives = 104/117 (88%), Gaps = 3/117 (2%)
 Frame = +1

Query: 1    GRFVFGRESKKVRETSENGGNNSFMKDGSNPKSLLQTLLMRAGHSPPKYKTKHLKTNEFR 180
            GRFVFGRESKK RE  ++   N F KDG+NPKSLLQTLLMRAGHSPPKYKTKHLKTNEFR
Sbjct: 1010 GRFVFGRESKKPREPCDS---NRFTKDGTNPKSLLQTLLMRAGHSPPKYKTKHLKTNEFR 1066

Query: 181  ALVEFKGMQFVGKPKKNKQLAERDAAVEALAWLTHTSDTNR---GEDDTPLDVTDNM 342
            ALVEFKGMQFVGKPKKNKQLAERDAA+EALAWLTHTSD ++   GED++P DVT+NM
Sbjct: 1067 ALVEFKGMQFVGKPKKNKQLAERDAAIEALAWLTHTSDNSQGEYGEDESPPDVTNNM 1123


>ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Vitis vinifera]
          Length = 1136

 Score =  188 bits (477), Expect = 2e-45
 Identities = 95/117 (81%), Positives = 104/117 (88%), Gaps = 3/117 (2%)
 Frame = +1

Query: 1    GRFVFGRESKKVRETSENGGNNSFMKDGSNPKSLLQTLLMRAGHSPPKYKTKHLKTNEFR 180
            GRFVFGRESKK RE  ++   N F KDG+NPKSLLQTLLMRAGHSPPKYKTKHLKTNEFR
Sbjct: 1010 GRFVFGRESKKPREPCDS---NRFTKDGTNPKSLLQTLLMRAGHSPPKYKTKHLKTNEFR 1066

Query: 181  ALVEFKGMQFVGKPKKNKQLAERDAAVEALAWLTHTSDTNR---GEDDTPLDVTDNM 342
            ALVEFKGMQFVGKPKKNKQLAERDAA+EALAWLTHTSD ++   GED++P DVT+NM
Sbjct: 1067 ALVEFKGMQFVGKPKKNKQLAERDAAIEALAWLTHTSDNSQGEYGEDESPPDVTNNM 1123


>ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
            max]
          Length = 1161

 Score =  187 bits (474), Expect = 5e-45
 Identities = 93/115 (80%), Positives = 103/115 (89%), Gaps = 1/115 (0%)
 Frame = +1

Query: 1    GRFVFGRESKKVRETSENGGNNSFMKDGSNPKSLLQTLLMRAGHSPPKYKTKHLKTNEFR 180
            GRFVFGRES+K + +++    N F KDG+NPKSLLQTLLMRAGHSPPKYKTKHLKTNEFR
Sbjct: 1035 GRFVFGRESRKPKASNDE---NKFTKDGTNPKSLLQTLLMRAGHSPPKYKTKHLKTNEFR 1091

Query: 181  ALVEFKGMQFVGKPKKNKQLAERDAAVEALAWLTHTSDTNRGEDD-TPLDVTDNM 342
            ALVEFKGMQFVGKPK+NKQLAERDAA+EALAWLTHTSD N+ EDD +P DVTDNM
Sbjct: 1092 ALVEFKGMQFVGKPKRNKQLAERDAAIEALAWLTHTSDNNQHEDDKSPPDVTDNM 1146


>ref|XP_002514451.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223546447|gb|EEF47947.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1129

 Score =  183 bits (464), Expect = 7e-44
 Identities = 93/115 (80%), Positives = 104/115 (90%), Gaps = 1/115 (0%)
 Frame = +1

Query: 1    GRFVFGRESKKVRETSENGGNNSFMKDGSNPKSLLQTLLMRAGHSPPKYKTKHLKTNEFR 180
            GRFVFGRESKK +E+SE+     F KDG+NPKSLLQTLLMRAGHSPPKYKTKHLKTNEFR
Sbjct: 1004 GRFVFGRESKKPKESSES----RFTKDGTNPKSLLQTLLMRAGHSPPKYKTKHLKTNEFR 1059

Query: 181  ALVEFKGMQFVGKPKKNKQLAERDAAVEALAWLTHTSDTNRGEDD-TPLDVTDNM 342
            ALVEFKGMQFVGKPKKNKQLAERDAA+EALAWLTHTSD+++ E++ +  DVTDNM
Sbjct: 1060 ALVEFKGMQFVGKPKKNKQLAERDAAIEALAWLTHTSDSSQEENEKSQPDVTDNM 1114


>ref|XP_004162736.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
            sativus]
          Length = 1144

 Score =  179 bits (455), Expect = 8e-43
 Identities = 91/116 (78%), Positives = 100/116 (86%), Gaps = 2/116 (1%)
 Frame = +1

Query: 1    GRFVFGRESKKVRETSENGGNNSFMKDGSNPKSLLQTLLMRAGHSPPKYKTKHLKTNEFR 180
            GRFVFGR SKK   +S++     F KDG+NPKSLLQTLLMRAGHSPPKYKTKHLKTNEFR
Sbjct: 1020 GRFVFGRNSKKQALSSKD----RFTKDGTNPKSLLQTLLMRAGHSPPKYKTKHLKTNEFR 1075

Query: 181  ALVEFKGMQFVGKPKKNKQLAERDAAVEALAWLTHTSDTN--RGEDDTPLDVTDNM 342
            ALVEFKGMQFVGKPKKNKQLAERDAA+E+LAWLT TSD N    +DD+P+DVTDNM
Sbjct: 1076 ALVEFKGMQFVGKPKKNKQLAERDAAIESLAWLTQTSDNNDANSDDDSPVDVTDNM 1131