BLASTX nr result
ID: Coptis21_contig00011097
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00011097 (1053 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI18267.3| unnamed protein product [Vitis vinifera] 188 2e-45 ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helica... 188 2e-45 ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helica... 187 5e-45 ref|XP_002514451.1| ATP-dependent RNA helicase, putative [Ricinu... 183 7e-44 ref|XP_004162736.1| PREDICTED: probable ATP-dependent RNA helica... 179 8e-43 >emb|CBI18267.3| unnamed protein product [Vitis vinifera] Length = 1162 Score = 188 bits (477), Expect = 2e-45 Identities = 95/117 (81%), Positives = 104/117 (88%), Gaps = 3/117 (2%) Frame = +1 Query: 1 GRFVFGRESKKVRETSENGGNNSFMKDGSNPKSLLQTLLMRAGHSPPKYKTKHLKTNEFR 180 GRFVFGRESKK RE ++ N F KDG+NPKSLLQTLLMRAGHSPPKYKTKHLKTNEFR Sbjct: 1010 GRFVFGRESKKPREPCDS---NRFTKDGTNPKSLLQTLLMRAGHSPPKYKTKHLKTNEFR 1066 Query: 181 ALVEFKGMQFVGKPKKNKQLAERDAAVEALAWLTHTSDTNR---GEDDTPLDVTDNM 342 ALVEFKGMQFVGKPKKNKQLAERDAA+EALAWLTHTSD ++ GED++P DVT+NM Sbjct: 1067 ALVEFKGMQFVGKPKKNKQLAERDAAIEALAWLTHTSDNSQGEYGEDESPPDVTNNM 1123 >ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Vitis vinifera] Length = 1136 Score = 188 bits (477), Expect = 2e-45 Identities = 95/117 (81%), Positives = 104/117 (88%), Gaps = 3/117 (2%) Frame = +1 Query: 1 GRFVFGRESKKVRETSENGGNNSFMKDGSNPKSLLQTLLMRAGHSPPKYKTKHLKTNEFR 180 GRFVFGRESKK RE ++ N F KDG+NPKSLLQTLLMRAGHSPPKYKTKHLKTNEFR Sbjct: 1010 GRFVFGRESKKPREPCDS---NRFTKDGTNPKSLLQTLLMRAGHSPPKYKTKHLKTNEFR 1066 Query: 181 ALVEFKGMQFVGKPKKNKQLAERDAAVEALAWLTHTSDTNR---GEDDTPLDVTDNM 342 ALVEFKGMQFVGKPKKNKQLAERDAA+EALAWLTHTSD ++ GED++P DVT+NM Sbjct: 1067 ALVEFKGMQFVGKPKKNKQLAERDAAIEALAWLTHTSDNSQGEYGEDESPPDVTNNM 1123 >ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine max] Length = 1161 Score = 187 bits (474), Expect = 5e-45 Identities = 93/115 (80%), Positives = 103/115 (89%), Gaps = 1/115 (0%) Frame = +1 Query: 1 GRFVFGRESKKVRETSENGGNNSFMKDGSNPKSLLQTLLMRAGHSPPKYKTKHLKTNEFR 180 GRFVFGRES+K + +++ N F KDG+NPKSLLQTLLMRAGHSPPKYKTKHLKTNEFR Sbjct: 1035 GRFVFGRESRKPKASNDE---NKFTKDGTNPKSLLQTLLMRAGHSPPKYKTKHLKTNEFR 1091 Query: 181 ALVEFKGMQFVGKPKKNKQLAERDAAVEALAWLTHTSDTNRGEDD-TPLDVTDNM 342 ALVEFKGMQFVGKPK+NKQLAERDAA+EALAWLTHTSD N+ EDD +P DVTDNM Sbjct: 1092 ALVEFKGMQFVGKPKRNKQLAERDAAIEALAWLTHTSDNNQHEDDKSPPDVTDNM 1146 >ref|XP_002514451.1| ATP-dependent RNA helicase, putative [Ricinus communis] gi|223546447|gb|EEF47947.1| ATP-dependent RNA helicase, putative [Ricinus communis] Length = 1129 Score = 183 bits (464), Expect = 7e-44 Identities = 93/115 (80%), Positives = 104/115 (90%), Gaps = 1/115 (0%) Frame = +1 Query: 1 GRFVFGRESKKVRETSENGGNNSFMKDGSNPKSLLQTLLMRAGHSPPKYKTKHLKTNEFR 180 GRFVFGRESKK +E+SE+ F KDG+NPKSLLQTLLMRAGHSPPKYKTKHLKTNEFR Sbjct: 1004 GRFVFGRESKKPKESSES----RFTKDGTNPKSLLQTLLMRAGHSPPKYKTKHLKTNEFR 1059 Query: 181 ALVEFKGMQFVGKPKKNKQLAERDAAVEALAWLTHTSDTNRGEDD-TPLDVTDNM 342 ALVEFKGMQFVGKPKKNKQLAERDAA+EALAWLTHTSD+++ E++ + DVTDNM Sbjct: 1060 ALVEFKGMQFVGKPKKNKQLAERDAAIEALAWLTHTSDSSQEENEKSQPDVTDNM 1114 >ref|XP_004162736.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis sativus] Length = 1144 Score = 179 bits (455), Expect = 8e-43 Identities = 91/116 (78%), Positives = 100/116 (86%), Gaps = 2/116 (1%) Frame = +1 Query: 1 GRFVFGRESKKVRETSENGGNNSFMKDGSNPKSLLQTLLMRAGHSPPKYKTKHLKTNEFR 180 GRFVFGR SKK +S++ F KDG+NPKSLLQTLLMRAGHSPPKYKTKHLKTNEFR Sbjct: 1020 GRFVFGRNSKKQALSSKD----RFTKDGTNPKSLLQTLLMRAGHSPPKYKTKHLKTNEFR 1075 Query: 181 ALVEFKGMQFVGKPKKNKQLAERDAAVEALAWLTHTSDTN--RGEDDTPLDVTDNM 342 ALVEFKGMQFVGKPKKNKQLAERDAA+E+LAWLT TSD N +DD+P+DVTDNM Sbjct: 1076 ALVEFKGMQFVGKPKKNKQLAERDAAIESLAWLTQTSDNNDANSDDDSPVDVTDNM 1131