BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011094
         (1114 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314781.1| predicted protein [Populus trichocarpa] gi|2...   352   1e-94
ref|XP_002526000.1| cleavage and polyadenylation specificity fac...   349   6e-94
ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261...   348   2e-93
emb|CBI26829.3| unnamed protein product [Vitis vinifera]              348   2e-93
ref|XP_003578085.1| PREDICTED: cleavage and polyadenylation spec...   333   4e-89

>ref|XP_002314781.1| predicted protein [Populus trichocarpa] gi|222863821|gb|EEF00952.1|
            predicted protein [Populus trichocarpa]
          Length = 639

 Score =  352 bits (903), Expect = 1e-94
 Identities = 169/252 (67%), Positives = 203/252 (80%)
 Frame = +1

Query: 1    YKMLIGWTSQKVKDSYATRNAFDFKHVCSFERSMLNDRGPCVLFATPGMISGGFSLEVFK 180
            YK+LI WTSQKVK++YATRNAFDFKHV +F+RS++N  GPCVLFATPGMISGGFSLEVFK
Sbjct: 278  YKILISWTSQKVKETYATRNAFDFKHVHNFDRSLINAPGPCVLFATPGMISGGFSLEVFK 337

Query: 181  QWAPSEINLITLPGYCVAGTIGHKLMSGKATRIQVDKETQVDVRCKIHQLSFSPHTDSKG 360
            QWAP E+NLITLPGYCVAGT+GHKLMSGK T+I +DK+TQ+DVRC+IHQLSFSPHTDSKG
Sbjct: 338  QWAPCEMNLITLPGYCVAGTVGHKLMSGKPTKINLDKDTQIDVRCQIHQLSFSPHTDSKG 397

Query: 361  IMDLVKFLSPKNVILVHGEKPKMAKLKGKIESELGIKCYDPANNDVVHITSPQYVKIDAT 540
            IMDL KFLSP+NVILVHGEKPKM  LK +I++EL I CY PAN D VHI S  YVK  A+
Sbjct: 398  IMDLTKFLSPRNVILVHGEKPKMVSLKERIQTELRIPCYLPANCDAVHIPSTIYVKAHAS 457

Query: 541  KAFIENCINPNAKSFDSKVEGTSDLSSKGTGSSPVKETYDKRVAEGILVMDKTKRPKAVH 720
              FI +C+NPN +      E  SD   + T  +   +  D+RVAEGIL+M+K K+ + VH
Sbjct: 458  NTFIRSCLNPNFRFLKRSKEDNSDQVLRNTNPTAPLQVNDERVAEGILIMEKGKKARVVH 517

Query: 721  QDELLSVLQVKR 756
            QD+LL +L+ K+
Sbjct: 518  QDDLLLMLRQKK 529


>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
            communis] gi|223534732|gb|EEF36424.1| cleavage and
            polyadenylation specificity factor, putative [Ricinus
            communis]
          Length = 963

 Score =  349 bits (896), Expect = 6e-94
 Identities = 167/252 (66%), Positives = 211/252 (83%)
 Frame = +1

Query: 1    YKMLIGWTSQKVKDSYATRNAFDFKHVCSFERSMLNDRGPCVLFATPGMISGGFSLEVFK 180
            YKMLIGWTSQK+K++Y +RNAFDFK+V +F+RS+L+  GPCVLFATPGMISGGFSLEVFK
Sbjct: 278  YKMLIGWTSQKIKETYTSRNAFDFKNVYTFDRSLLDAPGPCVLFATPGMISGGFSLEVFK 337

Query: 181  QWAPSEINLITLPGYCVAGTIGHKLMSGKATRIQVDKETQVDVRCKIHQLSFSPHTDSKG 360
            +WAP E+NL+TLPGYCVAGTIGHKLMSGK ++I +DK+TQ+DVRC+IHQLSFSPHTD+KG
Sbjct: 338  RWAPCEMNLVTLPGYCVAGTIGHKLMSGKPSKINLDKDTQIDVRCQIHQLSFSPHTDAKG 397

Query: 361  IMDLVKFLSPKNVILVHGEKPKMAKLKGKIESELGIKCYDPANNDVVHITSPQYVKIDAT 540
            IMDLVKFLSPK+VILVHGEKPKMA LK +I+SEL I+CY PAN + + I S  +VK DA+
Sbjct: 398  IMDLVKFLSPKHVILVHGEKPKMASLKERIQSELEIQCYVPANCETLCIPSTLFVKADAS 457

Query: 541  KAFIENCINPNAKSFDSKVEGTSDLSSKGTGSSPVKETYDKRVAEGILVMDKTKRPKAVH 720
            +AFI +C++PN +  +  ++ TSDL    T ++   E  D+RVAEGILV++K K+ + VH
Sbjct: 458  EAFIRSCLSPNFRFLNKSLKDTSDLVLHSTNATSRLEVSDERVAEGILVVEKNKKARVVH 517

Query: 721  QDELLSVLQVKR 756
            QDELL +L  K+
Sbjct: 518  QDELLLMLGAKQ 529


>ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
          Length = 2299

 Score =  348 bits (892), Expect = 2e-93
 Identities = 167/248 (67%), Positives = 208/248 (83%)
 Frame = +1

Query: 1    YKMLIGWTSQKVKDSYATRNAFDFKHVCSFERSMLNDRGPCVLFATPGMISGGFSLEVFK 180
            YKMLI WT+Q+VK++YAT NAFDFK+V SF+RS++N  GPCVLFATPGMISGGFSLEVFK
Sbjct: 1527 YKMLISWTNQRVKETYATHNAFDFKNVRSFDRSLINAPGPCVLFATPGMISGGFSLEVFK 1586

Query: 181  QWAPSEINLITLPGYCVAGTIGHKLMSGKATRIQVDKETQVDVRCKIHQLSFSPHTDSKG 360
             WAPSE+NL+TLPGYC+AGTIGHKL +GK T+I +DK+ Q+ VRC+IHQLSFSPHTD+KG
Sbjct: 1587 LWAPSEMNLVTLPGYCLAGTIGHKLTTGKPTKIDLDKDIQISVRCQIHQLSFSPHTDAKG 1646

Query: 361  IMDLVKFLSPKNVILVHGEKPKMAKLKGKIESELGIKCYDPANNDVVHITSPQYVKIDAT 540
            IMDLVKFLSPK+VILVHGEKPKMA LKGKIES+LGI+CY PANND V I S  ++K D +
Sbjct: 1647 IMDLVKFLSPKHVILVHGEKPKMASLKGKIESDLGIQCYYPANNDTVCIPSTCWLKADTS 1706

Query: 541  KAFIENCINPNAKSFDSKVEGTSDLSSKGTGSSPVKETYDKRVAEGILVMDKTKRPKAVH 720
            K FI + +NPN K   +  E  S+L SK T ++ V + +D+RVAEGIL+++K+K+ K VH
Sbjct: 1707 KTFIRSSLNPNFKFVKTISEDKSNLVSKETEATSVLQVHDERVAEGILIVEKSKKAKVVH 1766

Query: 721  QDELLSVL 744
            Q+ELL ++
Sbjct: 1767 QNELLLMI 1774


>emb|CBI26829.3| unnamed protein product [Vitis vinifera]
          Length = 686

 Score =  348 bits (892), Expect = 2e-93
 Identities = 167/248 (67%), Positives = 208/248 (83%)
 Frame = +1

Query: 1    YKMLIGWTSQKVKDSYATRNAFDFKHVCSFERSMLNDRGPCVLFATPGMISGGFSLEVFK 180
            YKMLI WT+Q+VK++YAT NAFDFK+V SF+RS++N  GPCVLFATPGMISGGFSLEVFK
Sbjct: 333  YKMLISWTNQRVKETYATHNAFDFKNVRSFDRSLINAPGPCVLFATPGMISGGFSLEVFK 392

Query: 181  QWAPSEINLITLPGYCVAGTIGHKLMSGKATRIQVDKETQVDVRCKIHQLSFSPHTDSKG 360
             WAPSE+NL+TLPGYC+AGTIGHKL +GK T+I +DK+ Q+ VRC+IHQLSFSPHTD+KG
Sbjct: 393  LWAPSEMNLVTLPGYCLAGTIGHKLTTGKPTKIDLDKDIQISVRCQIHQLSFSPHTDAKG 452

Query: 361  IMDLVKFLSPKNVILVHGEKPKMAKLKGKIESELGIKCYDPANNDVVHITSPQYVKIDAT 540
            IMDLVKFLSPK+VILVHGEKPKMA LKGKIES+LGI+CY PANND V I S  ++K D +
Sbjct: 453  IMDLVKFLSPKHVILVHGEKPKMASLKGKIESDLGIQCYYPANNDTVCIPSTCWLKADTS 512

Query: 541  KAFIENCINPNAKSFDSKVEGTSDLSSKGTGSSPVKETYDKRVAEGILVMDKTKRPKAVH 720
            K FI + +NPN K   +  E  S+L SK T ++ V + +D+RVAEGIL+++K+K+ K VH
Sbjct: 513  KTFIRSSLNPNFKFVKTISEDKSNLVSKETEATSVLQVHDERVAEGILIVEKSKKAKVVH 572

Query: 721  QDELLSVL 744
            Q+ELL ++
Sbjct: 573  QNELLLMI 580


>ref|XP_003578085.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            3-II-like [Brachypodium distachyon]
          Length = 553

 Score =  333 bits (855), Expect = 4e-89
 Identities = 165/252 (65%), Positives = 194/252 (76%)
 Frame = +1

Query: 1    YKMLIGWTSQKVKDSYATRNAFDFKHVCSFERSMLNDRGPCVLFATPGMISGGFSLEVFK 180
            YKMLIGWTSQK+KDSY  +N FDFKHVC FERS +ND GPCVLFATPGMISGGFSLEVFK
Sbjct: 282  YKMLIGWTSQKIKDSYTVQNPFDFKHVCHFERSFINDPGPCVLFATPGMISGGFSLEVFK 341

Query: 181  QWAPSEINLITLPGYCVAGTIGHKLMSGKATRIQVDKETQVDVRCKIHQLSFSPHTDSKG 360
            +WA S+ NL+TLPGYCVAGTIGHKLMSGK TRI +DK+T VDVRC+IHQLSFSPHTDSKG
Sbjct: 342  RWATSDKNLVTLPGYCVAGTIGHKLMSGKPTRIDIDKDTHVDVRCQIHQLSFSPHTDSKG 401

Query: 361  IMDLVKFLSPKNVILVHGEKPKMAKLKGKIESELGIKCYDPANNDVVHITSPQYVKIDAT 540
            IMDL +FLSP +VILVHGEKP+MA LK +IESELG+ CY PANN+ V I + Q +KI AT
Sbjct: 402  IMDLTEFLSPNHVILVHGEKPQMAFLKDRIESELGMSCYYPANNETVSIPTTQNMKISAT 461

Query: 541  KAFIENCINPNAKSFDSKVEGTSDLSSKGTGSSPVKETYDKRVAEGILVMDKTKRPKAVH 720
            + FI NC    A+    K +  S +   G          D+R+AEGIL+M+K+K PK + 
Sbjct: 462  EKFITNCAALQARDSLQKSDLISSIHLSGVNE-------DERLAEGILLMEKSKAPKILC 514

Query: 721  QDELLSVLQVKR 756
            +DE L +L   R
Sbjct: 515  EDEFLKLLGTDR 526