BLASTX nr result

ID: Coptis21_contig00011093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011093
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525183.1| DNA replication licensing factor MCM8, putat...   194   5e-48
ref|XP_003632628.1| PREDICTED: LOW QUALITY PROTEIN: DNA replicat...   194   8e-48
ref|XP_003553539.1| PREDICTED: DNA replication licensing factor ...   194   8e-48
emb|CBI32613.3| unnamed protein product [Vitis vinifera]              194   8e-48
ref|XP_003625578.1| DNA replication licensing factor MCM6 [Medic...   193   1e-47

>ref|XP_002525183.1| DNA replication licensing factor MCM8, putative [Ricinus communis]
           gi|223535480|gb|EEF37149.1| DNA replication licensing
           factor MCM8, putative [Ricinus communis]
          Length = 757

 Score =  194 bits (494), Expect = 5e-48
 Identities = 102/122 (83%), Positives = 105/122 (86%)
 Frame = -2

Query: 370 HSMDQNKXXXXXXXXXXXXXXPGLGKSQLLQAAASVSPRGIYICGNATTNAGLTVAVVKD 191
           HSMDQNK              PGLGKSQLLQAAA+VSPRGIY+CGNATTNAGLTVAVVKD
Sbjct: 382 HSMDQNKVPVRGDIHVIIVGDPGLGKSQLLQAAAAVSPRGIYVCGNATTNAGLTVAVVKD 441

Query: 190 PMTGDYAFEAGAMVLADRGLCCIDEFDKMSAEHQALLEAMEQQCVSVAKAGLVASLSART 11
            MT DYAFEAGAMVLAD GLCCIDEFDKMSAEHQALLEAMEQQCVSVAKAGL+ASLSART
Sbjct: 442 SMTSDYAFEAGAMVLADGGLCCIDEFDKMSAEHQALLEAMEQQCVSVAKAGLLASLSART 501

Query: 10  SV 5
           SV
Sbjct: 502 SV 503


>ref|XP_003632628.1| PREDICTED: LOW QUALITY PROTEIN: DNA replication licensing factor
           MCM8-like [Vitis vinifera]
          Length = 754

 Score =  194 bits (492), Expect = 8e-48
 Identities = 100/122 (81%), Positives = 106/122 (86%)
 Frame = -2

Query: 370 HSMDQNKXXXXXXXXXXXXXXPGLGKSQLLQAAASVSPRGIYICGNATTNAGLTVAVVKD 191
           +S D+NK              PGLGKSQLLQAAA++SPRGIY+CGNATTNAGLTVAVVKD
Sbjct: 375 YSTDKNKVPVRGDIHIIVVGDPGLGKSQLLQAAAAISPRGIYVCGNATTNAGLTVAVVKD 434

Query: 190 PMTGDYAFEAGAMVLADRGLCCIDEFDKMSAEHQALLEAMEQQCVSVAKAGLVASLSART 11
           PMT DYAFEAGAMVLADRGLCCIDEFDKMSAEHQ+LLEAMEQQCVSVAKAGLVASLSART
Sbjct: 435 PMTSDYAFEAGAMVLADRGLCCIDEFDKMSAEHQSLLEAMEQQCVSVAKAGLVASLSART 494

Query: 10  SV 5
           SV
Sbjct: 495 SV 496


>ref|XP_003553539.1| PREDICTED: DNA replication licensing factor MCM8-like [Glycine max]
          Length = 742

 Score =  194 bits (492), Expect = 8e-48
 Identities = 100/122 (81%), Positives = 104/122 (85%)
 Frame = -2

Query: 370 HSMDQNKXXXXXXXXXXXXXXPGLGKSQLLQAAASVSPRGIYICGNATTNAGLTVAVVKD 191
           HSMDQNK              PGLGKSQLLQAAA+VSPRGIY+CGNATT AGLTVAVVKD
Sbjct: 364 HSMDQNKVPVRGDIHVIIVGDPGLGKSQLLQAAAAVSPRGIYVCGNATTRAGLTVAVVKD 423

Query: 190 PMTGDYAFEAGAMVLADRGLCCIDEFDKMSAEHQALLEAMEQQCVSVAKAGLVASLSART 11
           PMT DYAFEAGAMVLAD GLCCIDEFDKMS EHQALLEAMEQQCVS+AKAGLVASLS+RT
Sbjct: 424 PMTSDYAFEAGAMVLADSGLCCIDEFDKMSTEHQALLEAMEQQCVSIAKAGLVASLSSRT 483

Query: 10  SV 5
           SV
Sbjct: 484 SV 485


>emb|CBI32613.3| unnamed protein product [Vitis vinifera]
          Length = 553

 Score =  194 bits (492), Expect = 8e-48
 Identities = 100/122 (81%), Positives = 106/122 (86%)
 Frame = -2

Query: 370 HSMDQNKXXXXXXXXXXXXXXPGLGKSQLLQAAASVSPRGIYICGNATTNAGLTVAVVKD 191
           +S D+NK              PGLGKSQLLQAAA++SPRGIY+CGNATTNAGLTVAVVKD
Sbjct: 152 YSTDKNKVPVRGDIHIIVVGDPGLGKSQLLQAAAAISPRGIYVCGNATTNAGLTVAVVKD 211

Query: 190 PMTGDYAFEAGAMVLADRGLCCIDEFDKMSAEHQALLEAMEQQCVSVAKAGLVASLSART 11
           PMT DYAFEAGAMVLADRGLCCIDEFDKMSAEHQ+LLEAMEQQCVSVAKAGLVASLSART
Sbjct: 212 PMTSDYAFEAGAMVLADRGLCCIDEFDKMSAEHQSLLEAMEQQCVSVAKAGLVASLSART 271

Query: 10  SV 5
           SV
Sbjct: 272 SV 273


>ref|XP_003625578.1| DNA replication licensing factor MCM6 [Medicago truncatula]
           gi|355500593|gb|AES81796.1| DNA replication licensing
           factor MCM6 [Medicago truncatula]
          Length = 884

 Score =  193 bits (490), Expect = 1e-47
 Identities = 99/122 (81%), Positives = 105/122 (86%)
 Frame = -2

Query: 370 HSMDQNKXXXXXXXXXXXXXXPGLGKSQLLQAAASVSPRGIYICGNATTNAGLTVAVVKD 191
           HSMDQNK              PGLGKSQLLQAAA+VSPRGIY+CGNATT AGLTVAVVKD
Sbjct: 460 HSMDQNKVPVRGDIHVIVVGDPGLGKSQLLQAAAAVSPRGIYVCGNATTKAGLTVAVVKD 519

Query: 190 PMTGDYAFEAGAMVLADRGLCCIDEFDKMSAEHQALLEAMEQQCVSVAKAGLVASLSART 11
           PMT DYAFEAGAMVLAD GLCCIDEFDKM++EHQALLEAMEQQCVS+AKAGLVASLS+RT
Sbjct: 520 PMTNDYAFEAGAMVLADSGLCCIDEFDKMTSEHQALLEAMEQQCVSIAKAGLVASLSSRT 579

Query: 10  SV 5
           SV
Sbjct: 580 SV 581


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