BLASTX nr result

ID: Coptis21_contig00011084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011084
         (1761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312385.1| predicted protein [Populus trichocarpa] gi|2...    65   2e-11
ref|XP_004135105.1| PREDICTED: serine/threonine-protein phosphat...    63   6e-11
ref|XP_002529138.1| serine/threonine protein phosphatase 2a regu...    63   6e-11
ref|XP_002973833.1| hypothetical protein SELMODRAFT_232183 [Sela...    64   1e-10
ref|XP_002314877.1| predicted protein [Populus trichocarpa] gi|1...    62   2e-10

>ref|XP_002312385.1| predicted protein [Populus trichocarpa] gi|222852205|gb|EEE89752.1|
           predicted protein [Populus trichocarpa]
          Length = 586

 Score = 65.5 bits (158), Expect(2) = 2e-11
 Identities = 39/75 (52%), Positives = 49/75 (65%)
 Frame = -2

Query: 467 KEGIKEELIPFLELESRIAENDGSIDNEELLAMARALKCFAQLVKGSDVAHALLPPLQTL 288
           +E  ++ELIPFL      +EN+   D+E LLAMA  L  F   V G D AH LLPPL+TL
Sbjct: 42  EERTRKELIPFL------SENNDD-DDEVLLAMAEELGVFIPFVGGVDYAHVLLPPLETL 94

Query: 287 CTVEQPWVREIAVEA 243
           CTVE+  VR+ AVE+
Sbjct: 95  CTVEETCVRDKAVES 109



 Score = 31.2 bits (69), Expect(2) = 2e-11
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = -1

Query: 240 QIGQ*MKNSDLL*WFVPLVKVRLNKVYWIRF*SLLCGL 127
           +IG  M+ +DL+ WF+PLVK RL    W       CGL
Sbjct: 112 RIGSQMRETDLVEWFIPLVK-RLAAGEWFTARVSACGL 148


>ref|XP_004135105.1| PREDICTED: serine/threonine-protein phosphatase 2A 65 kDa
           regulatory subunit A beta isoform-like [Cucumis sativus]
           gi|449493464|ref|XP_004159301.1| PREDICTED:
           serine/threonine-protein phosphatase 2A 65 kDa
           regulatory subunit A beta isoform-like [Cucumis sativus]
          Length = 587

 Score = 62.8 bits (151), Expect(2) = 6e-11
 Identities = 38/75 (50%), Positives = 49/75 (65%)
 Frame = -2

Query: 467 KEGIKEELIPFLELESRIAENDGSIDNEELLAMARALKCFAQLVKGSDVAHALLPPLQTL 288
           +E  ++ELIPFL      +EN+   D+E LLAMA  L  F   V G + AH LLPPL+TL
Sbjct: 42  EERTRKELIPFL------SENNDD-DDEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETL 94

Query: 287 CTVEQPWVREIAVEA 243
           CTVE+  VR+ AVE+
Sbjct: 95  CTVEETCVRDKAVES 109



 Score = 32.3 bits (72), Expect(2) = 6e-11
 Identities = 18/38 (47%), Positives = 22/38 (57%)
 Frame = -1

Query: 240 QIGQ*MKNSDLL*WFVPLVKVRLNKVYWIRF*SLLCGL 127
           +IG  M+ SDL+ WF+PLVK RL    W       CGL
Sbjct: 112 RIGSQMRESDLVDWFIPLVK-RLAAGEWFTARVSACGL 148


>ref|XP_002529138.1| serine/threonine protein phosphatase 2a regulatory subunit A,
           putative [Ricinus communis] gi|223531417|gb|EEF33251.1|
           serine/threonine protein phosphatase 2a regulatory
           subunit A, putative [Ricinus communis]
          Length = 587

 Score = 62.8 bits (151), Expect(2) = 6e-11
 Identities = 38/75 (50%), Positives = 49/75 (65%)
 Frame = -2

Query: 467 KEGIKEELIPFLELESRIAENDGSIDNEELLAMARALKCFAQLVKGSDVAHALLPPLQTL 288
           +E  ++ELIPFL      +EN+   D+E LLAMA  L  F   V G + AH LLPPL+TL
Sbjct: 42  EERTRKELIPFL------SENNDD-DDEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETL 94

Query: 287 CTVEQPWVREIAVEA 243
           CTVE+  VR+ AVE+
Sbjct: 95  CTVEETCVRDKAVES 109



 Score = 32.3 bits (72), Expect(2) = 6e-11
 Identities = 18/38 (47%), Positives = 22/38 (57%)
 Frame = -1

Query: 240 QIGQ*MKNSDLL*WFVPLVKVRLNKVYWIRF*SLLCGL 127
           +IG  M+ SDL+ WF+PLVK RL    W       CGL
Sbjct: 112 RIGSQMRESDLVDWFIPLVK-RLAAGEWFTARVSACGL 148


>ref|XP_002973833.1| hypothetical protein SELMODRAFT_232183 [Selaginella moellendorffii]
           gi|302803608|ref|XP_002983557.1| hypothetical protein
           SELMODRAFT_268734 [Selaginella moellendorffii]
           gi|300148800|gb|EFJ15458.1| hypothetical protein
           SELMODRAFT_268734 [Selaginella moellendorffii]
           gi|300158165|gb|EFJ24788.1| hypothetical protein
           SELMODRAFT_232183 [Selaginella moellendorffii]
          Length = 580

 Score = 64.3 bits (155), Expect(2) = 1e-10
 Identities = 40/93 (43%), Positives = 55/93 (59%)
 Frame = -2

Query: 521 HQAISDSRFSEKLPTGIVKEGIKEELIPFLELESRIAENDGSIDNEELLAMARALKCFAQ 342
           H  ++  R    +   + +E  ++ELIPFL      +EN+   D+E LLAMA  L  F  
Sbjct: 22  HLRLNSIRRLSTIARALGEERTRKELIPFL------SENNDD-DDEVLLAMAEELGAFIP 74

Query: 341 LVKGSDVAHALLPPLQTLCTVEQPWVREIAVEA 243
            V G D A+ LLPPL+TLCTV++  VRE AVE+
Sbjct: 75  YVGGVDYAYVLLPPLETLCTVDETIVREKAVES 107



 Score = 30.0 bits (66), Expect(2) = 1e-10
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = -1

Query: 240 QIGQ*MKNSDLL*WFVPLVKVRLNKVYW 157
           +IG  MK  DL+ WF+PLVK RL    W
Sbjct: 110 RIGSQMKEKDLVDWFIPLVK-RLGADEW 136


>ref|XP_002314877.1| predicted protein [Populus trichocarpa] gi|118484366|gb|ABK94060.1|
           unknown [Populus trichocarpa]
           gi|222863917|gb|EEF01048.1| predicted protein [Populus
           trichocarpa]
          Length = 587

 Score = 62.4 bits (150), Expect(2) = 2e-10
 Identities = 37/75 (49%), Positives = 49/75 (65%)
 Frame = -2

Query: 467 KEGIKEELIPFLELESRIAENDGSIDNEELLAMARALKCFAQLVKGSDVAHALLPPLQTL 288
           +E  ++ELIPFL      +EN+   D+E LLA+A  L  F   V G + AH LLPPL+TL
Sbjct: 42  EERTRKELIPFL------SENNDD-DDEVLLALAEELGVFIPYVGGVEYAHVLLPPLETL 94

Query: 287 CTVEQPWVREIAVEA 243
           CTVE+  VR+ AVE+
Sbjct: 95  CTVEETCVRDKAVES 109



 Score = 31.2 bits (69), Expect(2) = 2e-10
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = -1

Query: 240 QIGQ*MKNSDLL*WFVPLVKVRLNKVYWIRF*SLLCGL 127
           +IG  M+ +DL+ WF+PLVK RL    W       CGL
Sbjct: 112 RIGSQMRETDLVDWFIPLVK-RLAAGEWFTSRVSACGL 148


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