BLASTX nr result

ID: Coptis21_contig00011078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011078
         (1215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316350.1| predicted protein [Populus trichocarpa] gi|2...   297   4e-78
gb|ABK96158.1| unknown [Populus trichocarpa]                          293   5e-77
ref|XP_002529718.1| conserved hypothetical protein [Ricinus comm...   293   8e-77
ref|XP_002277030.1| PREDICTED: uncharacterized protein LOC100266...   290   4e-76
ref|XP_002312028.1| predicted protein [Populus trichocarpa] gi|2...   288   3e-75

>ref|XP_002316350.1| predicted protein [Populus trichocarpa] gi|222865390|gb|EEF02521.1|
           predicted protein [Populus trichocarpa]
          Length = 242

 Score =  297 bits (760), Expect = 4e-78
 Identities = 153/238 (64%), Positives = 168/238 (70%), Gaps = 1/238 (0%)
 Frame = +3

Query: 183 AALFQLLRSQKKQLSPIFN-QTGFHTSRIGTWEQASPVKYNMTPAMCPGAQRRWASRATE 359
           AAL  LLRSQ KQLS I N  +G+H  R GTW      K N   A     Q+RWASRAT 
Sbjct: 5   AALLHLLRSQSKQLSTIRNFHSGYHPCRFGTWPHDQCAKLNFNHASLTATQKRWASRATT 64

Query: 360 TEDDGKISIXXXXXXXXXXXXKDSGVVYYGPISSTIXXXXXXXXXXXXXXXXXGPVITFM 539
           T+DD KISI            K++GVVYYGPI+STI                 GPV+TFM
Sbjct: 65  TKDDNKISIGPRRGKEAGEDEKETGVVYYGPITSTIKKVKMLSLSTCCLSVSLGPVVTFM 124

Query: 540 TSQDMNVILKGAVASSVIFLSATTTGALHWFVSPYVHKLTWQPGSDSFEVQMMSWLGTYI 719
           TSQD NVILKGAVASSVIF SA+TT ALHWFVSPY+HKL WQPGSDSFEV+MMSWL TYI
Sbjct: 125 TSQDTNVILKGAVASSVIFFSASTTAALHWFVSPYIHKLRWQPGSDSFEVEMMSWLATYI 184

Query: 720 SKTIKFSDIRPAVTNRPYVTFQANGEFYFVDTEHCHNKALLARLTAQTPAHESAFKNL 893
            KTIKF+DIR   TNRP+VTF+ANG FYFVD+EHCHNKALL RLT Q  AHESAFKNL
Sbjct: 185 PKTIKFADIRLPETNRPFVTFKANGNFYFVDSEHCHNKALLNRLTPQKSAHESAFKNL 242


>gb|ABK96158.1| unknown [Populus trichocarpa]
          Length = 242

 Score =  293 bits (751), Expect = 5e-77
 Identities = 152/238 (63%), Positives = 167/238 (70%), Gaps = 1/238 (0%)
 Frame = +3

Query: 183 AALFQLLRSQKKQLSPIFN-QTGFHTSRIGTWEQASPVKYNMTPAMCPGAQRRWASRATE 359
           AAL  LLRSQ KQLS I N  +G+H  R GTW      K N   A     Q+RWASRAT 
Sbjct: 5   AALLHLLRSQSKQLSTIRNFHSGYHPCRFGTWPHDQCAKLNFNHASLTATQKRWASRATT 64

Query: 360 TEDDGKISIXXXXXXXXXXXXKDSGVVYYGPISSTIXXXXXXXXXXXXXXXXXGPVITFM 539
           T+DD KISI            K++GVVYY PI+STI                 GPV+TFM
Sbjct: 65  TKDDNKISIGPRRGKEAGEDEKETGVVYYCPITSTIKKVKMLSLSTCCLSVSLGPVVTFM 124

Query: 540 TSQDMNVILKGAVASSVIFLSATTTGALHWFVSPYVHKLTWQPGSDSFEVQMMSWLGTYI 719
           TSQD NVILKGAVASSVIF SA+TT ALHWFVSPY+HKL WQPGSDSFEV+MMSWL TYI
Sbjct: 125 TSQDTNVILKGAVASSVIFFSASTTAALHWFVSPYIHKLRWQPGSDSFEVEMMSWLATYI 184

Query: 720 SKTIKFSDIRPAVTNRPYVTFQANGEFYFVDTEHCHNKALLARLTAQTPAHESAFKNL 893
            KTIKF+DIR   TNRP+VTF+ANG FYFVD+EHCHNKALL RLT Q  AHESAFKNL
Sbjct: 185 PKTIKFADIRLPETNRPFVTFKANGNFYFVDSEHCHNKALLNRLTPQKSAHESAFKNL 242


>ref|XP_002529718.1| conserved hypothetical protein [Ricinus communis]
           gi|223530820|gb|EEF32684.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 242

 Score =  293 bits (749), Expect = 8e-77
 Identities = 152/242 (62%), Positives = 172/242 (71%), Gaps = 2/242 (0%)
 Frame = +3

Query: 174 MTRAALFQLLRSQKKQLS-PIFNQTGFHTSRIGTWEQASPVKYNMTPAM-CPGAQRRWAS 347
           M R AL  LLRSQ + LS P   Q+G+   R GTW  A   K N   A+    +Q+RWAS
Sbjct: 1   MARTALLHLLRSQTRNLSSPSTVQSGYRVCRFGTWSHAHTAKTNYNSAIQIAASQKRWAS 60

Query: 348 RATETEDDGKISIXXXXXXXXXXXXKDSGVVYYGPISSTIXXXXXXXXXXXXXXXXXGPV 527
           +A  TEDD +ISI            K++GVVYYGPISSTI                 GPV
Sbjct: 61  QARTTEDDNRISIGPRRGKEAGEDEKETGVVYYGPISSTIKKVKLLSLSTCCLSVSLGPV 120

Query: 528 ITFMTSQDMNVILKGAVASSVIFLSATTTGALHWFVSPYVHKLTWQPGSDSFEVQMMSWL 707
           ITFMTS DMNVILKGAVASSVIFLSA+TT ALHWFV+PY+HKL WQPGSDSFEV+MMSW+
Sbjct: 121 ITFMTSPDMNVILKGAVASSVIFLSASTTAALHWFVTPYIHKLRWQPGSDSFEVEMMSWM 180

Query: 708 GTYISKTIKFSDIRPAVTNRPYVTFQANGEFYFVDTEHCHNKALLARLTAQTPAHESAFK 887
            TYI KTIKF+DIRPA TNRP+VTF+A+G FYFVDTEHCHNKALLARLT Q   +ESAFK
Sbjct: 181 ATYIPKTIKFADIRPAETNRPFVTFKADGNFYFVDTEHCHNKALLARLTPQKSQNESAFK 240

Query: 888 NL 893
           NL
Sbjct: 241 NL 242


>ref|XP_002277030.1| PREDICTED: uncharacterized protein LOC100266780 [Vitis vinifera]
           gi|296086053|emb|CBI31494.3| unnamed protein product
           [Vitis vinifera]
          Length = 241

 Score =  290 bits (743), Expect = 4e-76
 Identities = 147/241 (60%), Positives = 170/241 (70%), Gaps = 1/241 (0%)
 Frame = +3

Query: 174 MTRAALFQLLRSQKKQLSPIFNQTGFHTSRIGTWEQASPVKYNMTPAM-CPGAQRRWASR 350
           M R AL  LLRSQ +++S     +G+H  R G W  A   K N+  A+    +QRRWAS+
Sbjct: 1   MGRVALLHLLRSQSRRISSTNALSGYHPHRFGIWPHAPSAKPNINSAIQLAASQRRWASK 60

Query: 351 ATETEDDGKISIXXXXXXXXXXXXKDSGVVYYGPISSTIXXXXXXXXXXXXXXXXXGPVI 530
           A   EDD KISI            KDSG+VY+GPISST+                 GPVI
Sbjct: 61  ARTAEDDSKISIGPRRGGEMEEDEKDSGIVYHGPISSTVKKVKLLSLSTCCLSVSLGPVI 120

Query: 531 TFMTSQDMNVILKGAVASSVIFLSATTTGALHWFVSPYVHKLTWQPGSDSFEVQMMSWLG 710
           TFMTS +MNVILKGAVASSVIFLSA+TT ALHWFVSPYVHKL WQPGSD+FEV+MMSWL 
Sbjct: 121 TFMTSPEMNVILKGAVASSVIFLSASTTAALHWFVSPYVHKLRWQPGSDTFEVEMMSWLA 180

Query: 711 TYISKTIKFSDIRPAVTNRPYVTFQANGEFYFVDTEHCHNKALLARLTAQTPAHESAFKN 890
           TY+ KT+KF+DIRP  TNRP+VTF+ANG FYFVD EHCHNKALLA+LT +  AHESAFKN
Sbjct: 181 TYLPKTLKFADIRPPETNRPFVTFKANGNFYFVDAEHCHNKALLAKLTPRKAAHESAFKN 240

Query: 891 L 893
           L
Sbjct: 241 L 241


>ref|XP_002312028.1| predicted protein [Populus trichocarpa] gi|222851848|gb|EEE89395.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score =  288 bits (736), Expect = 3e-75
 Identities = 149/239 (62%), Positives = 166/239 (69%), Gaps = 2/239 (0%)
 Frame = +3

Query: 183 AALFQLLRSQKKQLSPIFN-QTGFHTSRIGTWEQASPVKYNMT-PAMCPGAQRRWASRAT 356
           AAL  LLRSQ KQ S   N  +G+H  + GTW  +   K N     +    Q+RWAS+A 
Sbjct: 5   AALLHLLRSQTKQFSASRNFHSGYHPCQFGTWSHSLCAKSNFNHDTLLAATQKRWASQAK 64

Query: 357 ETEDDGKISIXXXXXXXXXXXXKDSGVVYYGPISSTIXXXXXXXXXXXXXXXXXGPVITF 536
            TEDD KISI            K++GVVYYGPISST+                 GPVITF
Sbjct: 65  TTEDDNKISIGPRGGKEVGQDEKETGVVYYGPISSTVKKVKLLSLSTCCLSVSLGPVITF 124

Query: 537 MTSQDMNVILKGAVASSVIFLSATTTGALHWFVSPYVHKLTWQPGSDSFEVQMMSWLGTY 716
           MTSQD NVILKGAVASSVIF SA+TT ALHWFVSPY+HKL WQPGSDSFEV+MMSWLG Y
Sbjct: 125 MTSQDSNVILKGAVASSVIFFSASTTAALHWFVSPYIHKLRWQPGSDSFEVEMMSWLGIY 184

Query: 717 ISKTIKFSDIRPAVTNRPYVTFQANGEFYFVDTEHCHNKALLARLTAQTPAHESAFKNL 893
           I KTIKF+DIRP  TNRP+VTF+ANG FYFVD EHCHNKALL RLT +  AHESAFKNL
Sbjct: 185 IPKTIKFADIRPPETNRPFVTFKANGNFYFVDAEHCHNKALLNRLTPKKSAHESAFKNL 243


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