BLASTX nr result

ID: Coptis21_contig00011076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011076
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325306.1| BED finger-nbs-lrr resistance protein [Popul...    90   2e-16
ref|XP_002333864.1| nbs-lrr resistance protein [Populus trichoca...    87   2e-15
gb|ABK95672.1| unknown [Populus trichocarpa]                           87   2e-15
ref|XP_002329158.1| BED finger-nbs-lrr resistance protein [Popul...    85   5e-15
ref|XP_002317519.1| nbs-lrr resistance protein [Populus trichoca...    85   5e-15

>ref|XP_002325306.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222862181|gb|EEE99687.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 1570

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 46/82 (56%), Positives = 60/82 (73%)
 Frame = -3

Query: 248 KHVAHGFFMHMPKLTVLDLSGTLIESLPDSVSDLVNLRGLLLNYCKKLVRVPSLSKLQSL 69
           + +A  FF  M  L VLDLS T IE LPDSVSDLV L  LLLN C++L RVPSL KL++L
Sbjct: 616 RFIAGSFFEQMHGLKVLDLSNTAIECLPDSVSDLVGLTSLLLNNCQRLSRVPSLKKLRAL 675

Query: 68  RVLKLTRSAIEELPHGMEMLVN 3
           + L L+R+ ++++PHGM+ L N
Sbjct: 676 KRLDLSRTPLKKIPHGMKCLSN 697


>ref|XP_002333864.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222838740|gb|EEE77105.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 957

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 46/80 (57%), Positives = 59/80 (73%)
 Frame = -3

Query: 242 VAHGFFMHMPKLTVLDLSGTLIESLPDSVSDLVNLRGLLLNYCKKLVRVPSLSKLQSLRV 63
           +A  FF  +  L VLDLS T IE+LPDSVSDLV+L  LLLN C+KL  V SL KL++L+ 
Sbjct: 544 IADSFFKQLHGLKVLDLSWTGIENLPDSVSDLVSLSALLLNDCEKLRHVSSLKKLRALKR 603

Query: 62  LKLTRSAIEELPHGMEMLVN 3
           L L+R+A+E++P GME L N
Sbjct: 604 LNLSRTALEKMPQGMECLTN 623


>gb|ABK95672.1| unknown [Populus trichocarpa]
          Length = 446

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 46/80 (57%), Positives = 59/80 (73%)
 Frame = -3

Query: 242 VAHGFFMHMPKLTVLDLSGTLIESLPDSVSDLVNLRGLLLNYCKKLVRVPSLSKLQSLRV 63
           +A  FF  +  L VLDLS T IE+LPDSVSDLV+L  LLLN C+KL  V SL KL++L+ 
Sbjct: 33  IADSFFKQLHGLKVLDLSWTGIENLPDSVSDLVSLSALLLNDCEKLRHVSSLKKLRALKR 92

Query: 62  LKLTRSAIEELPHGMEMLVN 3
           L L+R+A+E++P GME L N
Sbjct: 93  LNLSRTALEKMPQGMECLTN 112


>ref|XP_002329158.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222869827|gb|EEF06958.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 954

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 45/80 (56%), Positives = 53/80 (66%)
 Frame = -3

Query: 242 VAHGFFMHMPKLTVLDLSGTLIESLPDSVSDLVNLRGLLLNYCKKLVRVPSLSKLQSLRV 63
           +A  FF H+  L VLDLS T I  LP S SDLVNL  L L  C+ L  +PSL+KL+ LR 
Sbjct: 509 IADSFFKHLQGLKVLDLSATAIRELPSSFSDLVNLTALYLRRCENLRYIPSLAKLRELRK 568

Query: 62  LKLTRSAIEELPHGMEMLVN 3
           L L  +A+EELP GMEML N
Sbjct: 569 LDLRYTALEELPQGMEMLSN 588


>ref|XP_002317519.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222860584|gb|EEE98131.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 958

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 45/80 (56%), Positives = 54/80 (67%)
 Frame = -3

Query: 242 VAHGFFMHMPKLTVLDLSGTLIESLPDSVSDLVNLRGLLLNYCKKLVRVPSLSKLQSLRV 63
           +A  FF H+  L VL+LS T I  LP S SDLVNL  L L  C+KL  +PSL+KL+ LR 
Sbjct: 503 IADSFFKHLQGLKVLNLSSTAIPKLPGSFSDLVNLTALYLRRCEKLRHIPSLAKLRELRK 562

Query: 62  LKLTRSAIEELPHGMEMLVN 3
           L L  +A+EELP GMEML N
Sbjct: 563 LDLRYTALEELPQGMEMLSN 582


Top