BLASTX nr result

ID: Coptis21_contig00011075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011075
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325713.1| nbs-lrr resistance protein [Populus trichoca...   108   6e-22
ref|XP_002333022.1| nbs-lrr resistance protein [Populus trichoca...   108   6e-22
ref|XP_002329502.1| BED finger-nbs-lrr resistance protein [Popul...   107   1e-21
emb|CBI20133.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_002317519.1| nbs-lrr resistance protein [Populus trichoca...   107   1e-21

>ref|XP_002325713.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222862588|gb|EEF00095.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 929

 Score =  108 bits (269), Expect = 6e-22
 Identities = 60/115 (52%), Positives = 82/115 (71%), Gaps = 3/115 (2%)
 Frame = +3

Query: 12  EVPHEDDWSEDLERVSFMYSRIKDI--SIIPKCPKLSTLILRSRN-LKHVASGFFMDMPK 182
           E+P E++W+E L RVS M+++IK+I  S  P+CP LSTL+LR  + L+ +A  FF  +  
Sbjct: 387 ELPGEEEWTEHLMRVSLMHNQIKEIPSSHSPRCPSLSTLLLRGNSELQFIADSFFEQLRG 446

Query: 183 LTVLDLSETHIESLPDSVSDLVNLRGLLLIDCRKLVRVPSLSKLQSLRVLKLTNS 347
           L VLDLS T I  LPDSVS+LV+L  LLLIDC+ L  VPSL KL++L+ L L+ +
Sbjct: 447 LKVLDLSYTGITKLPDSVSELVSLTALLLIDCKMLRHVPSLEKLRALKRLDLSGT 501


>ref|XP_002333022.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222834654|gb|EEE73117.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 674

 Score =  108 bits (269), Expect = 6e-22
 Identities = 61/119 (51%), Positives = 84/119 (70%), Gaps = 3/119 (2%)
 Frame = +3

Query: 12  EVPHEDDWSEDLERVSFMYSRIKDI--SIIPKCPKLSTLIL-RSRNLKHVASGFFMDMPK 182
           EVP  ++W+E+L RVS M + IK+I  S  P+CP LS L+L R+  L+ +A+ FF  +  
Sbjct: 431 EVPGAEEWTENLTRVSLMRNHIKEIPSSHSPRCPSLSILLLCRNSELQFIANSFFKQLHG 490

Query: 183 LTVLDLSETHIESLPDSVSDLVNLRGLLLIDCRKLVRVPSLSKLQSLRVLKLTNSAIEE 359
           L VLDLS T I  LPDSVS+LV+L  LLLIDC+ L  VPSL KL++L+ L L+ +A+E+
Sbjct: 491 LKVLDLSYTGITKLPDSVSELVSLTTLLLIDCKMLRHVPSLEKLRALKRLDLSGTALEK 549


>ref|XP_002329502.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222870182|gb|EEF07313.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 979

 Score =  107 bits (267), Expect = 1e-21
 Identities = 60/119 (50%), Positives = 83/119 (69%), Gaps = 3/119 (2%)
 Frame = +3

Query: 12  EVPHEDDWSEDLERVSFMYSRIKDI--SIIPKCPKLSTLIL-RSRNLKHVASGFFMDMPK 182
           E+P  ++W+E+L RVS M + I++I  S  P+CP LSTL+L  +  L+ +A  FF  +  
Sbjct: 499 ELPDAEEWTENLTRVSLMQNHIREIPSSHSPRCPHLSTLLLCHNERLRFIADSFFKQLLG 558

Query: 183 LTVLDLSETHIESLPDSVSDLVNLRGLLLIDCRKLVRVPSLSKLQSLRVLKLTNSAIEE 359
           L VLDLS T+IE+L DSVSDLV+L  LLL  C KL  VPSL KL++LR L L+N+ +E+
Sbjct: 559 LKVLDLSYTNIENLADSVSDLVSLTTLLLKGCEKLRHVPSLQKLRALRKLDLSNTTLEK 617


>emb|CBI20133.3| unnamed protein product [Vitis vinifera]
          Length = 656

 Score =  107 bits (266), Expect = 1e-21
 Identities = 59/118 (50%), Positives = 77/118 (65%), Gaps = 2/118 (1%)
 Frame = +3

Query: 12  EVPHEDDWSEDLERVSFMYSRIKDISIIPKCPKLSTLILRSRNLKHVA--SGFFMDMPKL 185
           E+P E  W E+LERVS M SR+  +  IP CPKLS L+L+S    +++  + FF+ M  L
Sbjct: 242 ELPSEIQWLENLERVSLMGSRLDALKSIPNCPKLSILLLQSLRCLNISFPNAFFVHMSNL 301

Query: 186 TVLDLSETHIESLPDSVSDLVNLRGLLLIDCRKLVRVPSLSKLQSLRVLKLTNSAIEE 359
            VLDLS T I  LPDS+S+LVNLR L L  C  L  VPSL+KL+ LR L ++ S I +
Sbjct: 302 KVLDLSNTRILFLPDSISNLVNLRALFLCRCYTLFHVPSLAKLKELRELDISESGIRK 359


>ref|XP_002317519.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222860584|gb|EEE98131.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 958

 Score =  107 bits (266), Expect = 1e-21
 Identities = 62/119 (52%), Positives = 77/119 (64%), Gaps = 3/119 (2%)
 Frame = +3

Query: 12  EVPHEDDWSEDLERVSFMYSRIKDI--SIIPKCPKLSTLILRSR-NLKHVASGFFMDMPK 182
           E+P +D+W EDL RVS M +R+K+I  S  P CPKLSTL L S   L+ +A  FF  +  
Sbjct: 454 ELPGKDEWKEDLVRVSLMENRLKEIPSSCSPMCPKLSTLFLNSNIELEMIADSFFKHLQG 513

Query: 183 LTVLDLSETHIESLPDSVSDLVNLRGLLLIDCRKLVRVPSLSKLQSLRVLKLTNSAIEE 359
           L VL+LS T I  LP S SDLVNL  L L  C KL  +PSL+KL+ LR L L  +A+EE
Sbjct: 514 LKVLNLSSTAIPKLPGSFSDLVNLTALYLRRCEKLRHIPSLAKLRELRKLDLRYTALEE 572


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