BLASTX nr result

ID: Coptis21_contig00011073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011073
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80269.1| hypothetical protein VITISV_020031 [Vitis vinifera]   135   6e-30
ref|XP_004149114.1| PREDICTED: nucleolar MIF4G domain-containing...   134   2e-29
emb|CBI31217.3| unnamed protein product [Vitis vinifera]              134   2e-29
ref|XP_002269480.1| PREDICTED: nucleolar MIF4G domain-containing...   134   2e-29
ref|XP_002319180.1| predicted protein [Populus trichocarpa] gi|2...   129   4e-28

>emb|CAN80269.1| hypothetical protein VITISV_020031 [Vitis vinifera]
          Length = 700

 Score =  135 bits (340), Expect = 6e-30
 Identities = 64/108 (59%), Positives = 86/108 (79%)
 Frame = +1

Query: 295 YCMWDYYKELDSMELIQSKNLAAFTAEMLVYFSLSLAVLKAVDLTDLKQLTPKRVMHFRM 474
           YC+WD++KELDSMEL++S +LA F AEML  F+LSL+VLK VDL+D  QLTP+R+MHFRM
Sbjct: 574 YCLWDHFKELDSMELLRSMHLAKFIAEMLTSFTLSLSVLKTVDLSDSLQLTPRRIMHFRM 633

Query: 475 LFEAVFKSAFRMHFRMLFTRVGVTPELEPLRNGLQFFMKQYVVNAGHA 618
           LFEA+FK   ++ +  +FTR+ V PELE LRNG+ FF+++YV +   A
Sbjct: 634 LFEAIFKKPDKLVWN-VFTRIAVAPELETLRNGILFFIREYVASTNQA 680


>ref|XP_004149114.1| PREDICTED: nucleolar MIF4G domain-containing protein 1-like
           [Cucumis sativus]
          Length = 688

 Score =  134 bits (336), Expect = 2e-29
 Identities = 62/109 (56%), Positives = 87/109 (79%)
 Frame = +1

Query: 295 YCMWDYYKELDSMELIQSKNLAAFTAEMLVYFSLSLAVLKAVDLTDLKQLTPKRVMHFRM 474
           YC+WD +KELD+M+LI+S NLA F AEM+  F+LSLAVLK+VDL+D++ LT KR+MHFRM
Sbjct: 562 YCLWDQFKELDTMQLIRSMNLAKFVAEMITSFTLSLAVLKSVDLSDIRLLTAKRIMHFRM 621

Query: 475 LFEAVFKSAFRMHFRMLFTRVGVTPELEPLRNGLQFFMKQYVVNAGHAN 621
           LF+A+F+   ++ +  +FTRV V PELEPLR+G+ FF+K+Y++     N
Sbjct: 622 LFDAIFERPDKLIWN-VFTRVAVNPELEPLRSGMLFFIKEYMIKTSKVN 669


>emb|CBI31217.3| unnamed protein product [Vitis vinifera]
          Length = 536

 Score =  134 bits (336), Expect = 2e-29
 Identities = 63/108 (58%), Positives = 86/108 (79%)
 Frame = +1

Query: 295 YCMWDYYKELDSMELIQSKNLAAFTAEMLVYFSLSLAVLKAVDLTDLKQLTPKRVMHFRM 474
           YC+WD++KELDSMEL++S +LA F AEML  F+LSL+VLK VDL+D  QLTP+R+MHFRM
Sbjct: 410 YCLWDHFKELDSMELLRSMHLAKFIAEMLTSFTLSLSVLKTVDLSDSLQLTPRRIMHFRM 469

Query: 475 LFEAVFKSAFRMHFRMLFTRVGVTPELEPLRNGLQFFMKQYVVNAGHA 618
           LFEA+F+   ++ +  +FTR+ V PELE LRNG+ FF+++YV +   A
Sbjct: 470 LFEAIFEKPDKLVWN-VFTRIAVAPELETLRNGILFFIREYVASTNQA 516


>ref|XP_002269480.1| PREDICTED: nucleolar MIF4G domain-containing protein 1 [Vitis
           vinifera]
          Length = 700

 Score =  134 bits (336), Expect = 2e-29
 Identities = 63/108 (58%), Positives = 86/108 (79%)
 Frame = +1

Query: 295 YCMWDYYKELDSMELIQSKNLAAFTAEMLVYFSLSLAVLKAVDLTDLKQLTPKRVMHFRM 474
           YC+WD++KELDSMEL++S +LA F AEML  F+LSL+VLK VDL+D  QLTP+R+MHFRM
Sbjct: 574 YCLWDHFKELDSMELLRSMHLAKFIAEMLTSFTLSLSVLKTVDLSDSLQLTPRRIMHFRM 633

Query: 475 LFEAVFKSAFRMHFRMLFTRVGVTPELEPLRNGLQFFMKQYVVNAGHA 618
           LFEA+F+   ++ +  +FTR+ V PELE LRNG+ FF+++YV +   A
Sbjct: 634 LFEAIFEKPDKLVWN-VFTRIAVAPELETLRNGILFFIREYVASTNQA 680


>ref|XP_002319180.1| predicted protein [Populus trichocarpa] gi|222857556|gb|EEE95103.1|
           predicted protein [Populus trichocarpa]
          Length = 330

 Score =  129 bits (325), Expect = 4e-28
 Identities = 64/115 (55%), Positives = 93/115 (80%)
 Frame = +1

Query: 295 YCMWDYYKELDSMELIQSKNLAAFTAEMLVYFSLSLAVLKAVDLTDLKQLTPKRVMHFRM 474
           +C+WD++KEL+SM+L++S +LA F AEM+  F+LSLAVLK+V+L+D+ QLTPKR+MHFRM
Sbjct: 204 FCIWDHFKELESMQLLRSMHLAKFIAEMVGSFTLSLAVLKSVELSDITQLTPKRIMHFRM 263

Query: 475 LFEAVFKSAFRMHFRMLFTRVGVTPELEPLRNGLQFFMKQYVVNAGHANKSISNK 639
           LFEA+F+    + +  L TRV V+PELE LR+G++FF+++YVV     NK+ +NK
Sbjct: 264 LFEALFEYPDEVIWNSL-TRVAVSPELETLRHGIEFFIREYVVK---TNKAFANK 314


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