BLASTX nr result

ID: Coptis21_contig00011072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011072
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149114.1| PREDICTED: nucleolar MIF4G domain-containing...   162   2e-38
emb|CAN80269.1| hypothetical protein VITISV_020031 [Vitis vinifera]   161   6e-38
emb|CBI31217.3| unnamed protein product [Vitis vinifera]              159   2e-37
ref|XP_002269480.1| PREDICTED: nucleolar MIF4G domain-containing...   159   2e-37
ref|XP_002319180.1| predicted protein [Populus trichocarpa] gi|2...   154   9e-36

>ref|XP_004149114.1| PREDICTED: nucleolar MIF4G domain-containing protein 1-like
           [Cucumis sativus]
          Length = 688

 Score =  162 bits (411), Expect = 2e-38
 Identities = 72/102 (70%), Positives = 89/102 (87%)
 Frame = +2

Query: 2   CSHDKNHKFTLQYCLWDYYKELDSMELIQSKNLATFTAEMLASFSLSLAVLKAVDLTDLK 181
           C H+KNHKFTLQYCLWD +KELD+M+LI+S NLA F AEM+ SF+LSLAVLK+VDL+D++
Sbjct: 550 CEHEKNHKFTLQYCLWDQFKELDTMQLIRSMNLAKFVAEMITSFTLSLAVLKSVDLSDIR 609

Query: 182 HLTPKRVMHFRMLFEAIFKNPDATVWNIFTRIGVTPELEPLR 307
            LT KR+MHFRMLF+AIF+ PD  +WN+FTR+ V PELEPLR
Sbjct: 610 LLTAKRIMHFRMLFDAIFERPDKLIWNVFTRVAVNPELEPLR 651


>emb|CAN80269.1| hypothetical protein VITISV_020031 [Vitis vinifera]
          Length = 700

 Score =  161 bits (407), Expect = 6e-38
 Identities = 75/102 (73%), Positives = 86/102 (84%)
 Frame = +2

Query: 2   CSHDKNHKFTLQYCLWDYYKELDSMELIQSKNLATFTAEMLASFSLSLAVLKAVDLTDLK 181
           C HDKN KFTLQYCLWD++KELDSMEL++S +LA F AEML SF+LSL+VLK VDL+D  
Sbjct: 562 CEHDKNQKFTLQYCLWDHFKELDSMELLRSMHLAKFIAEMLTSFTLSLSVLKTVDLSDSL 621

Query: 182 HLTPKRVMHFRMLFEAIFKNPDATVWNIFTRIGVTPELEPLR 307
            LTP+R+MHFRMLFEAIFK PD  VWN+FTRI V PELE LR
Sbjct: 622 QLTPRRIMHFRMLFEAIFKKPDKLVWNVFTRIAVAPELETLR 663


>emb|CBI31217.3| unnamed protein product [Vitis vinifera]
          Length = 536

 Score =  159 bits (403), Expect = 2e-37
 Identities = 74/102 (72%), Positives = 86/102 (84%)
 Frame = +2

Query: 2   CSHDKNHKFTLQYCLWDYYKELDSMELIQSKNLATFTAEMLASFSLSLAVLKAVDLTDLK 181
           C HDKN KFTLQYCLWD++KELDSMEL++S +LA F AEML SF+LSL+VLK VDL+D  
Sbjct: 398 CEHDKNQKFTLQYCLWDHFKELDSMELLRSMHLAKFIAEMLTSFTLSLSVLKTVDLSDSL 457

Query: 182 HLTPKRVMHFRMLFEAIFKNPDATVWNIFTRIGVTPELEPLR 307
            LTP+R+MHFRMLFEAIF+ PD  VWN+FTRI V PELE LR
Sbjct: 458 QLTPRRIMHFRMLFEAIFEKPDKLVWNVFTRIAVAPELETLR 499


>ref|XP_002269480.1| PREDICTED: nucleolar MIF4G domain-containing protein 1 [Vitis
           vinifera]
          Length = 700

 Score =  159 bits (403), Expect = 2e-37
 Identities = 74/102 (72%), Positives = 86/102 (84%)
 Frame = +2

Query: 2   CSHDKNHKFTLQYCLWDYYKELDSMELIQSKNLATFTAEMLASFSLSLAVLKAVDLTDLK 181
           C HDKN KFTLQYCLWD++KELDSMEL++S +LA F AEML SF+LSL+VLK VDL+D  
Sbjct: 562 CEHDKNQKFTLQYCLWDHFKELDSMELLRSMHLAKFIAEMLTSFTLSLSVLKTVDLSDSL 621

Query: 182 HLTPKRVMHFRMLFEAIFKNPDATVWNIFTRIGVTPELEPLR 307
            LTP+R+MHFRMLFEAIF+ PD  VWN+FTRI V PELE LR
Sbjct: 622 QLTPRRIMHFRMLFEAIFEKPDKLVWNVFTRIAVAPELETLR 663


>ref|XP_002319180.1| predicted protein [Populus trichocarpa] gi|222857556|gb|EEE95103.1|
           predicted protein [Populus trichocarpa]
          Length = 330

 Score =  154 bits (388), Expect = 9e-36
 Identities = 67/102 (65%), Positives = 88/102 (86%)
 Frame = +2

Query: 2   CSHDKNHKFTLQYCLWDYYKELDSMELIQSKNLATFTAEMLASFSLSLAVLKAVDLTDLK 181
           C HDKNHKFTLQ+C+WD++KEL+SM+L++S +LA F AEM+ SF+LSLAVLK+V+L+D+ 
Sbjct: 192 CEHDKNHKFTLQFCIWDHFKELESMQLLRSMHLAKFIAEMVGSFTLSLAVLKSVELSDIT 251

Query: 182 HLTPKRVMHFRMLFEAIFKNPDATVWNIFTRIGVTPELEPLR 307
            LTPKR+MHFRMLFEA+F+ PD  +WN  TR+ V+PELE LR
Sbjct: 252 QLTPKRIMHFRMLFEALFEYPDEVIWNSLTRVAVSPELETLR 293


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