BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011069
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-contain...    67   5e-11
emb|CBI34941.3| unnamed protein product [Vitis vinifera]               67   5e-11
ref|XP_004158345.1| PREDICTED: methyl-CpG-binding domain-contain...    70   3e-10
ref|XP_004141185.1| PREDICTED: methyl-CpG-binding domain-contain...    70   3e-10
ref|XP_002324013.1| methyl binding domain protein [Populus trich...    56   5e-06

>ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
           [Vitis vinifera]
          Length = 2164

 Score = 67.4 bits (163), Expect(2) = 5e-11
 Identities = 34/70 (48%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
 Frame = +3

Query: 270 VRKCLSGKPKESFKAPAELPSKGRKGPC-VCGREEARGGVIVCDGCERWFHLTCAGMRSR 446
           V +   G+   +  A A LP +G    C VCG  E    V+VCDGCER FHL C GM  R
Sbjct: 46  VVRSFHGELSPAAGAAAGLPGEGWGSVCAVCGAPEVGAQVLVCDGCERGFHLVCVGMPGR 105

Query: 447 QAVVLEDWVC 476
           QA +LE+WVC
Sbjct: 106 QAGMLEEWVC 115



 Score = 25.4 bits (54), Expect(2) = 5e-11
 Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
 Frame = +2

Query: 461 GRLGVWDLCGKWV----GSKRWRLGRVTQFFDTYCLYFSINLASPPVSD*SLGKDIPE 622
           G L  W +CG+ V    GSKRW LG   +  D       IN ASPP      G+++P+
Sbjct: 108 GMLEEW-VCGECVRSGVGSKRWPLGSKRRLLD-------IN-ASPPSE--GEGEELPD 154


>emb|CBI34941.3| unnamed protein product [Vitis vinifera]
          Length = 1907

 Score = 67.4 bits (163), Expect(2) = 5e-11
 Identities = 34/70 (48%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
 Frame = +3

Query: 270 VRKCLSGKPKESFKAPAELPSKGRKGPC-VCGREEARGGVIVCDGCERWFHLTCAGMRSR 446
           V +   G+   +  A A LP +G    C VCG  E    V+VCDGCER FHL C GM  R
Sbjct: 46  VVRSFHGELSPAAGAAAGLPGEGWGSVCAVCGAPEVGAQVLVCDGCERGFHLVCVGMPGR 105

Query: 447 QAVVLEDWVC 476
           QA +LE+WVC
Sbjct: 106 QAGMLEEWVC 115



 Score = 25.4 bits (54), Expect(2) = 5e-11
 Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
 Frame = +2

Query: 461 GRLGVWDLCGKWV----GSKRWRLGRVTQFFDTYCLYFSINLASPPVSD*SLGKDIPE 622
           G L  W +CG+ V    GSKRW LG   +  D       IN ASPP      G+++P+
Sbjct: 108 GMLEEW-VCGECVRSGVGSKRWPLGSKRRLLD-------IN-ASPPSE--GEGEELPD 154


>ref|XP_004158345.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
           [Cucumis sativus]
          Length = 1028

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 33/62 (53%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
 Frame = +3

Query: 294 PKESFKAPAELPSKGRKGPC-VCGREEARGGVIVCDGCERWFHLTCAGMRSRQAVVLEDW 470
           P  S   PA +P   R   C +CG+ E RG V+VCDGCER FHL C GMR   A+  EDW
Sbjct: 174 PPPSDGDPAHVPRGVRGSVCGLCGQPEVRGHVVVCDGCERGFHLACTGMRGGHALNFEDW 233

Query: 471 VC 476
           VC
Sbjct: 234 VC 235


>ref|XP_004141185.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
           [Cucumis sativus]
          Length = 2131

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 33/62 (53%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
 Frame = +3

Query: 294 PKESFKAPAELPSKGRKGPC-VCGREEARGGVIVCDGCERWFHLTCAGMRSRQAVVLEDW 470
           P  S   PA +P   R   C +CG+ E RG V+VCDGCER FHL C GMR   A+  EDW
Sbjct: 63  PPPSDGDPAHVPRGVRGSVCGLCGQPEVRGHVVVCDGCERGFHLACTGMRGGHALNFEDW 122

Query: 471 VC 476
           VC
Sbjct: 123 VC 124


>ref|XP_002324013.1| methyl binding domain protein [Populus trichocarpa]
           gi|222867015|gb|EEF04146.1| methyl binding domain
           protein [Populus trichocarpa]
          Length = 90

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 24/40 (60%), Positives = 29/40 (72%)
 Frame = +3

Query: 357 CGREEARGGVIVCDGCERWFHLTCAGMRSRQAVVLEDWVC 476
           CG+ E RG V+VCDGCER FHL CAG   RQA+   +W+C
Sbjct: 15  CGKPEVRGQVVVCDGCERGFHLGCAG---RQAINSAEWLC 51