BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011067
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_007353796.1| cytochrome b6 (chloroplast) [Chrysanthemum x...   159   3e-37
ref|YP_005089444.1| petB gene product (chloroplast) [Silene noct...   159   3e-37
ref|YP_004465217.1| cytochrome b6 [Jacobaea vulgaris] gi|4528490...   159   3e-37
ref|YP_004221951.1| cytochrome b6 [Erodium carvifolium] gi|31692...   159   3e-37
ref|YP_006503821.1| cytochrome b6 (chloroplast) [Datura stramoni...   159   3e-37

>ref|YP_007353796.1| cytochrome b6 (chloroplast) [Chrysanthemum x morifolium]
           gi|375298866|gb|AFA45305.1| cytochrome b6 (chloroplast)
           [Chrysanthemum x morifolium]
          Length = 215

 Score =  159 bits (401), Expect = 3e-37
 Identities = 76/82 (92%), Positives = 79/82 (96%)
 Frame = +1

Query: 43  HRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPRDKIGY 222
           HRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPRD+IGY
Sbjct: 86  HRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPRDQIGY 145

Query: 223 WAVKIVTGVPDVIPVIGSAITK 288
           WAVKIVTGVPD IPVIGS + +
Sbjct: 146 WAVKIVTGVPDAIPVIGSPLVE 167


>ref|YP_005089444.1| petB gene product (chloroplast) [Silene noctiflora]
           gi|329755633|gb|AEC04195.1| cytochrome b6 (chloroplast)
           [Silene noctiflora]
          Length = 215

 Score =  159 bits (401), Expect = 3e-37
 Identities = 75/82 (91%), Positives = 79/82 (96%)
 Frame = +1

Query: 43  HRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPRDKIGY 222
           HRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPRD+IGY
Sbjct: 86  HRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPRDQIGY 145

Query: 223 WAVKIVTGVPDVIPVIGSAITK 288
           WAVKIVTGVPD IPV+GS + +
Sbjct: 146 WAVKIVTGVPDAIPVVGSTLVE 167


>ref|YP_004465217.1| cytochrome b6 [Jacobaea vulgaris] gi|452849081|ref|YP_007474759.1|
           cytochrome b6 (chloroplast) [Chrysanthemum indicum]
           gi|308156112|gb|ADO15440.1| cytochrome b6 [Jacobaea
           vulgaris] gi|372863236|gb|AEX99308.1| cytochrome b6
           (chloroplast) [Chrysanthemum indicum]
           gi|372863475|gb|AEX99544.1| cytochrome b6 (chloroplast)
           [Chrysanthemum indicum]
          Length = 215

 Score =  159 bits (401), Expect = 3e-37
 Identities = 76/82 (92%), Positives = 79/82 (96%)
 Frame = +1

Query: 43  HRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPRDKIGY 222
           HRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPRD+IGY
Sbjct: 86  HRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPRDQIGY 145

Query: 223 WAVKIVTGVPDVIPVIGSAITK 288
           WAVKIVTGVPD IPVIGS + +
Sbjct: 146 WAVKIVTGVPDAIPVIGSPLVE 167


>ref|YP_004221951.1| cytochrome b6 [Erodium carvifolium] gi|316926323|gb|ADU58176.1|
           cytochrome b6 [Erodium carvifolium]
          Length = 215

 Score =  159 bits (401), Expect = 3e-37
 Identities = 76/82 (92%), Positives = 79/82 (96%)
 Frame = +1

Query: 43  HRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPRDKIGY 222
           HRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPRD+IGY
Sbjct: 86  HRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPRDQIGY 145

Query: 223 WAVKIVTGVPDVIPVIGSAITK 288
           WAVKIVTGVPD IPVIGS + +
Sbjct: 146 WAVKIVTGVPDAIPVIGSPLVE 167


>ref|YP_006503821.1| cytochrome b6 (chloroplast) [Datura stramonium]
           gi|404474555|ref|YP_006666060.1| cytochrome b6
           (chloroplast) [Capsicum annuum]
           gi|290489382|gb|ADD31075.1| cytochrome b6 protein
           [Antirrhinum majus] gi|350996456|gb|AEQ36968.1|
           cytochrome b6 (chloroplast) [Datura stramonium]
           gi|350996542|gb|AEQ37053.1| cytochrome b6 [Datura
           stramonium] gi|401065962|gb|AFP90806.1| cytochrome b6
           (chloroplast) [Capsicum annuum]
          Length = 215

 Score =  159 bits (401), Expect = 3e-37
 Identities = 76/82 (92%), Positives = 79/82 (96%)
 Frame = +1

Query: 43  HRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPRDKIGY 222
           HRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPRD+IGY
Sbjct: 86  HRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPRDQIGY 145

Query: 223 WAVKIVTGVPDVIPVIGSAITK 288
           WAVKIVTGVPD IPVIGS + +
Sbjct: 146 WAVKIVTGVPDAIPVIGSPLVE 167