BLASTX nr result

ID: Coptis21_contig00011061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011061
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29711.3| unnamed protein product [Vitis vinifera]              184   5e-45
ref|XP_002526458.1| conserved hypothetical protein [Ricinus comm...   181   4e-44
ref|XP_002882229.1| hypothetical protein ARALYDRAFT_896211 [Arab...   179   2e-43
ref|XP_002869724.1| hypothetical protein ARALYDRAFT_492419 [Arab...   177   6e-43
ref|NP_194162.1| uncharacterized protein [Arabidopsis thaliana] ...   174   9e-42

>emb|CBI29711.3| unnamed protein product [Vitis vinifera]
          Length = 238

 Score =  184 bits (468), Expect = 5e-45
 Identities = 93/154 (60%), Positives = 111/154 (72%), Gaps = 3/154 (1%)
 Frame = +3

Query: 3   TANLANLLPTGTVSAFQLLIPTFTNNGSCDSAARFMTQMXXXXXXXXXXXXXXTDSFKAQ 182
           TANLANLLPTGT+ AFQLL P FTNNG+CD+  RF                  TDSFK  
Sbjct: 86  TANLANLLPTGTLLAFQLLTPVFTNNGACDAVTRF------------------TDSFKTP 127

Query: 183 DGQVYYGLLTFKGMWLFDYPMMS---TSVPDLSKYRLRVIDGVHAVLSVFVFMAIALRDA 353
           DG+V+YG+ TFKG+WLFDY   S    S+PDLSKY+ R IDGVHAVLSV VF+A+A+RD 
Sbjct: 128 DGRVFYGIATFKGLWLFDYVDESGSAASLPDLSKYKFRFIDGVHAVLSVLVFVAVAMRDK 187

Query: 354 NVLKCFCPQPEQETTQILNVAPVGIGLICSLLFV 455
           NV+ CF PQP +E  ++L++ PVGIGLICSLLFV
Sbjct: 188 NVVSCFYPQPAREVQEVLDIVPVGIGLICSLLFV 221


>ref|XP_002526458.1| conserved hypothetical protein [Ricinus communis]
           gi|223534238|gb|EEF35953.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 230

 Score =  181 bits (460), Expect = 4e-44
 Identities = 94/153 (61%), Positives = 111/153 (72%), Gaps = 2/153 (1%)
 Frame = +3

Query: 3   TANLANLLPTGTVSAFQLLIPTFTNNGSCDSAARFMTQMXXXXXXXXXXXXXXTDSFKAQ 182
           TANLANLLPTGT+ AFQLL P FTNNG+CDS  R MT                TDS K+ 
Sbjct: 61  TANLANLLPTGTLLAFQLLTPIFTNNGACDSVTRPMTLCLLALLAISCFLSSFTDSVKSS 120

Query: 183 DG-QVYYGLLTFKGMWLFDYP-MMSTSVPDLSKYRLRVIDGVHAVLSVFVFMAIALRDAN 356
           DG QVYYG+ TFKG++LFD P  +   + DLSKY++R IDGVH+VLSV VF+A ALRD N
Sbjct: 121 DGKQVYYGIATFKGIFLFDCPDPVGAGLKDLSKYKIRFIDGVHSVLSVLVFIAFALRDKN 180

Query: 357 VLKCFCPQPEQETTQILNVAPVGIGLICSLLFV 455
           V+ CF P P+ ET ++LN+APVGIGLICSLLFV
Sbjct: 181 VVSCFYPMPKHETQEVLNIAPVGIGLICSLLFV 213


>ref|XP_002882229.1| hypothetical protein ARALYDRAFT_896211 [Arabidopsis lyrata subsp.
           lyrata] gi|297328069|gb|EFH58488.1| hypothetical protein
           ARALYDRAFT_896211 [Arabidopsis lyrata subsp. lyrata]
          Length = 219

 Score =  179 bits (454), Expect = 2e-43
 Identities = 84/151 (55%), Positives = 108/151 (71%), Gaps = 1/151 (0%)
 Frame = +3

Query: 6   ANLANLLPTGTVSAFQLLIPTFTNNGSCDSAARFMTQMXXXXXXXXXXXXXXTDSFKAQD 185
           ANL+NLLPTGT+ AFQLL P FT+NG CD A RF+T +              TDS KA+D
Sbjct: 49  ANLSNLLPTGTLLAFQLLTPVFTSNGVCDHATRFLTAVLLFLLAASCFVSSFTDSVKAED 108

Query: 186 GQVYYGLLTFKGMWLFDYPMMS-TSVPDLSKYRLRVIDGVHAVLSVFVFMAIALRDANVL 362
           G +Y+G +TFKGMW+ DYP  S   +PDL+KYR+RV+D +HA LSV VF A+ALRD  + 
Sbjct: 109 GTIYFGFVTFKGMWVVDYPDPSGLGLPDLAKYRMRVVDWIHATLSVLVFGAVALRDKYIT 168

Query: 363 KCFCPQPEQETTQILNVAPVGIGLICSLLFV 455
            CFCP PE ET  +L++ PVG+G++CSLLF+
Sbjct: 169 DCFCPSPEAETKHVLDIVPVGVGVMCSLLFM 199


>ref|XP_002869724.1| hypothetical protein ARALYDRAFT_492419 [Arabidopsis lyrata subsp.
           lyrata] gi|297315560|gb|EFH45983.1| hypothetical protein
           ARALYDRAFT_492419 [Arabidopsis lyrata subsp. lyrata]
          Length = 213

 Score =  177 bits (450), Expect = 6e-43
 Identities = 87/151 (57%), Positives = 106/151 (70%), Gaps = 1/151 (0%)
 Frame = +3

Query: 6   ANLANLLPTGTVSAFQLLIPTFTNNGSCDSAARFMTQMXXXXXXXXXXXXXXTDSFKAQD 185
           ANLANLLPTGT+ AF LLIP FT+NGSCD   R +T                TDS KA+D
Sbjct: 43  ANLANLLPTGTLLAFTLLIPVFTSNGSCDYPTRVLTAGLLTLLSISCFLSSFTDSVKAED 102

Query: 186 GQVYYGLLTFKGMWLFDYPMMS-TSVPDLSKYRLRVIDGVHAVLSVFVFMAIALRDANVL 362
           G VYYG  T KGMW+FDYP      +PDLSKYR+R+ID +HAVLSV VF A+ALRD N +
Sbjct: 103 GNVYYGFATRKGMWIFDYPDPDGLGLPDLSKYRIRIIDWIHAVLSVLVFGAVALRDKNAV 162

Query: 363 KCFCPQPEQETTQILNVAPVGIGLICSLLFV 455
            CF P PEQET ++L++ P+G+G+IC LLF+
Sbjct: 163 SCFYPAPEQETKKVLDIVPMGVGVICGLLFL 193


>ref|NP_194162.1| uncharacterized protein [Arabidopsis thaliana]
           gi|5051773|emb|CAB45066.1| putative protein [Arabidopsis
           thaliana] gi|7269281|emb|CAB79341.1| putative protein
           [Arabidopsis thaliana] gi|28466871|gb|AAO44044.1|
           At4g24310 [Arabidopsis thaliana]
           gi|110736143|dbj|BAF00043.1| hypothetical protein
           [Arabidopsis thaliana] gi|332659488|gb|AEE84888.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 213

 Score =  174 bits (440), Expect = 9e-42
 Identities = 84/151 (55%), Positives = 107/151 (70%), Gaps = 1/151 (0%)
 Frame = +3

Query: 6   ANLANLLPTGTVSAFQLLIPTFTNNGSCDSAARFMTQMXXXXXXXXXXXXXXTDSFKAQD 185
           ANLANLLPTGT+ AF LLIP FT+NGSCD   + +T +              TDS KA+D
Sbjct: 43  ANLANLLPTGTLLAFTLLIPVFTSNGSCDYPTQVLTIVLLTLLSISCFLSSFTDSVKAED 102

Query: 186 GQVYYGLLTFKGMWLFDYPMMS-TSVPDLSKYRLRVIDGVHAVLSVFVFMAIALRDANVL 362
           G VYYG  T KGMW+FDYP      +P+LSKYR+R+ID +HAVLSV VF A+ALRD N +
Sbjct: 103 GNVYYGFATRKGMWVFDYPDPDGLGLPNLSKYRIRIIDWIHAVLSVLVFGAVALRDKNAV 162

Query: 363 KCFCPQPEQETTQILNVAPVGIGLICSLLFV 455
            CF P PEQET ++L++ P+G+G+IC +LF+
Sbjct: 163 SCFYPAPEQETKKVLDIVPMGVGVICGMLFL 193


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