BLASTX nr result
ID: Coptis21_contig00011059
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00011059 (1738 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002276436.2| PREDICTED: crt homolog 1-like [Vitis vinifera] 471 e-130 emb|CBI24254.3| unnamed protein product [Vitis vinifera] 469 e-130 ref|XP_003556785.1| PREDICTED: crt homolog 1-like [Glycine max] 467 e-129 ref|XP_002313263.1| predicted protein [Populus trichocarpa] gi|2... 464 e-128 ref|XP_003545164.1| PREDICTED: crt homolog 1-like [Glycine max] 460 e-127 >ref|XP_002276436.2| PREDICTED: crt homolog 1-like [Vitis vinifera] Length = 453 Score = 471 bits (1211), Expect = e-130 Identities = 246/370 (66%), Positives = 272/370 (73%) Frame = +1 Query: 322 WIIESLSQERGNTIVQSDGEDXXXXXXXXXXXXXXXXXXXXXLVAAAATVILGVGNRVLY 501 W S + RG+ +V + ED ++AAA TV+LGVGNRVLY Sbjct: 76 WSYGSEDRRRGDLVVVEEKEDVGCAGGGCEGDRRMKV-----VIAAAFTVVLGVGNRVLY 130 Query: 502 KLALVPLKHYPFFLAQLATFGYVLVYFSILYFRYHAGIVTDEMLSMPKAPFXXXXXXXXX 681 KLALVPLKHYPFFLAQLAT GYVLVYFSIL RY+AGIVTDEMLS+PK P+ Sbjct: 131 KLALVPLKHYPFFLAQLATVGYVLVYFSILSLRYNAGIVTDEMLSLPKTPYVAVGLLEAL 190 Query: 682 XXXXXXXXXXXXXXTSIPILSQTFLVWQLLLSAIFLGRRYRPNQIFGCLLVAIGVVITVA 861 SIPILSQ+FLVWQLLLSAIFLGRRY+ NQ+ GC LVAIGV+ITVA Sbjct: 191 GAATGMAAGAILSGASIPILSQSFLVWQLLLSAIFLGRRYKVNQLLGCFLVAIGVIITVA 250 Query: 862 SGSSGGLSLKDAGVFWTLLMITSFFLQAGDTVLKEIIFLDAARHLKGGSVDLFVLNSYGS 1041 SGSS G SLK AG+FW+LLM+ SF QA DTVLKE IFL AA LKGGSVDLFV+NSYGS Sbjct: 251 SGSSAGASLKGAGIFWSLLMMVSFLFQAADTVLKERIFLKAAERLKGGSVDLFVVNSYGS 310 Query: 1042 AFQAFFICLLLPFLSKLWGVPFSQLPSYLKDGAACFLNIGSLSKGCQGAPMLPLLFIIVN 1221 AFQA FICLLLPFLSKLWGVPFS LP+YLKDGAACFLNIGSLS GC GAP+LPLLF++VN Sbjct: 311 AFQALFICLLLPFLSKLWGVPFSHLPNYLKDGAACFLNIGSLSSGCDGAPLLPLLFVVVN 370 Query: 1222 MAYNISLLHLLKISSAVVSCLASTFSVPLSVYAFTLPLPYIGVASSLPXXXXXXXXXXXX 1401 M +NISLLHLLKISSAVVSCLASTFSVP++VY FTLPLPY+GVASSLP Sbjct: 371 MGFNISLLHLLKISSAVVSCLASTFSVPIAVYMFTLPLPYLGVASSLPPAFVTGAIILLV 430 Query: 1402 XXXXXXWTPP 1431 WTPP Sbjct: 431 GLMIYAWTPP 440 >emb|CBI24254.3| unnamed protein product [Vitis vinifera] Length = 344 Score = 469 bits (1208), Expect = e-130 Identities = 239/328 (72%), Positives = 261/328 (79%) Frame = +1 Query: 448 LVAAAATVILGVGNRVLYKLALVPLKHYPFFLAQLATFGYVLVYFSILYFRYHAGIVTDE 627 ++AAA TV+LGVGNRVLYKLALVPLKHYPFFLAQLAT GYVLVYFSIL RY+AGIVTDE Sbjct: 4 VIAAAFTVVLGVGNRVLYKLALVPLKHYPFFLAQLATVGYVLVYFSILSLRYNAGIVTDE 63 Query: 628 MLSMPKAPFXXXXXXXXXXXXXXXXXXXXXXXTSIPILSQTFLVWQLLLSAIFLGRRYRP 807 MLS+PK P+ SIPILSQ+FLVWQLLLSAIFLGRRY+ Sbjct: 64 MLSLPKTPYVAVGLLEALGAATGMAAGAILSGASIPILSQSFLVWQLLLSAIFLGRRYKV 123 Query: 808 NQIFGCLLVAIGVVITVASGSSGGLSLKDAGVFWTLLMITSFFLQAGDTVLKEIIFLDAA 987 NQ+ GC LVAIGV+ITVASGSS G SLK AG+FW+LLM+ SF QA DTVLKE IFL AA Sbjct: 124 NQLLGCFLVAIGVIITVASGSSAGASLKGAGIFWSLLMMVSFLFQAADTVLKERIFLKAA 183 Query: 988 RHLKGGSVDLFVLNSYGSAFQAFFICLLLPFLSKLWGVPFSQLPSYLKDGAACFLNIGSL 1167 LKGGSVDLFV+NSYGSAFQA FICLLLPFLSKLWGVPFS LP+YLKDGAACFLNIGSL Sbjct: 184 ERLKGGSVDLFVVNSYGSAFQALFICLLLPFLSKLWGVPFSHLPNYLKDGAACFLNIGSL 243 Query: 1168 SKGCQGAPMLPLLFIIVNMAYNISLLHLLKISSAVVSCLASTFSVPLSVYAFTLPLPYIG 1347 S GC GAP+LPLLF++VNM +NISLLHLLKISSAVVSCLASTFSVP++VY FTLPLPY+G Sbjct: 244 SSGCDGAPLLPLLFVVVNMGFNISLLHLLKISSAVVSCLASTFSVPIAVYMFTLPLPYLG 303 Query: 1348 VASSLPXXXXXXXXXXXXXXXXXXWTPP 1431 VASSLP WTPP Sbjct: 304 VASSLPPAFVTGAIILLVGLMIYAWTPP 331 >ref|XP_003556785.1| PREDICTED: crt homolog 1-like [Glycine max] Length = 428 Score = 467 bits (1201), Expect = e-129 Identities = 233/333 (69%), Positives = 265/333 (79%) Frame = +1 Query: 448 LVAAAATVILGVGNRVLYKLALVPLKHYPFFLAQLATFGYVLVYFSILYFRYHAGIVTDE 627 ++AAA TV++G GNRVLYKLALVPLK+YPFFLAQLATFGYV+VYFSILY RY AGIVTDE Sbjct: 92 VLAAAVTVVMGAGNRVLYKLALVPLKNYPFFLAQLATFGYVIVYFSILYIRYRAGIVTDE 151 Query: 628 MLSMPKAPFXXXXXXXXXXXXXXXXXXXXXXXTSIPILSQTFLVWQLLLSAIFLGRRYRP 807 MLS+PK PF SIPILSQ FLVWQ+LLS IFLGRRY+ Sbjct: 152 MLSVPKTPFLVVGLLEALGAATGMAAGAMLSGASIPILSQAFLVWQILLSYIFLGRRYKV 211 Query: 808 NQIFGCLLVAIGVVITVASGSSGGLSLKDAGVFWTLLMITSFFLQAGDTVLKEIIFLDAA 987 NQ+ GC LVAIGV++TVASGS G SLK+AG+FW+LLMI SF QA DTVLKE+IFLDA Sbjct: 212 NQLVGCFLVAIGVILTVASGSGAGHSLKEAGIFWSLLMIVSFLFQAADTVLKEVIFLDAT 271 Query: 988 RHLKGGSVDLFVLNSYGSAFQAFFICLLLPFLSKLWGVPFSQLPSYLKDGAACFLNIGSL 1167 R LKGGS+D+FV+NS+GSAFQA FICLLLPFLSKLWGVPF QLP+YLKDGAACFLN+G+L Sbjct: 272 RKLKGGSLDMFVVNSFGSAFQALFICLLLPFLSKLWGVPFGQLPNYLKDGAACFLNVGTL 331 Query: 1168 SKGCQGAPMLPLLFIIVNMAYNISLLHLLKISSAVVSCLASTFSVPLSVYAFTLPLPYIG 1347 S+GC GAP+LPLLFIIVNM +NISLLHLLKISSAVVSCLASTFSVP+++Y FTLPLPYIG Sbjct: 332 SRGCDGAPLLPLLFIIVNMGFNISLLHLLKISSAVVSCLASTFSVPIAIYVFTLPLPYIG 391 Query: 1348 VASSLPXXXXXXXXXXXXXXXXXXWTPPVSTTS 1446 VASSLP WTP S+++ Sbjct: 392 VASSLPAGFVAGAIILIIGLLIYAWTPSNSSST 424 >ref|XP_002313263.1| predicted protein [Populus trichocarpa] gi|222849671|gb|EEE87218.1| predicted protein [Populus trichocarpa] Length = 451 Score = 464 bits (1195), Expect = e-128 Identities = 233/326 (71%), Positives = 263/326 (80%) Frame = +1 Query: 451 VAAAATVILGVGNRVLYKLALVPLKHYPFFLAQLATFGYVLVYFSILYFRYHAGIVTDEM 630 VAAA TV+LGVGNRVLYKLAL+PLKHYPFFLAQLATFGYV+VYF+IL+ R+ AGIVTDEM Sbjct: 125 VAAAVTVVLGVGNRVLYKLALLPLKHYPFFLAQLATFGYVIVYFTILHIRHRAGIVTDEM 184 Query: 631 LSMPKAPFXXXXXXXXXXXXXXXXXXXXXXXTSIPILSQTFLVWQLLLSAIFLGRRYRPN 810 LSMPKAP+ SIPILSQTFLVWQ+LLS IFLGRRY+ N Sbjct: 185 LSMPKAPYILVGLLEALGAATGMAAGAILSGASIPILSQTFLVWQILLSTIFLGRRYKVN 244 Query: 811 QIFGCLLVAIGVVITVASGSSGGLSLKDAGVFWTLLMITSFFLQAGDTVLKEIIFLDAAR 990 Q+ GC LVA+GV+ITVASG S G SL++AG+FW+LLM+ SFFLQA DTVLKE+IF DAA+ Sbjct: 245 QLLGCFLVAVGVIITVASGPSAG-SLREAGIFWSLLMMFSFFLQAADTVLKEVIFSDAAK 303 Query: 991 HLKGGSVDLFVLNSYGSAFQAFFICLLLPFLSKLWGVPFSQLPSYLKDGAACFLNIGSLS 1170 LKGGSVDLFV+NSYGSAFQA F+CLLLPF+SKLWG+PFSQLP+YLKDGA CFLNIGSLS Sbjct: 304 QLKGGSVDLFVINSYGSAFQALFVCLLLPFMSKLWGIPFSQLPNYLKDGAVCFLNIGSLS 363 Query: 1171 KGCQGAPMLPLLFIIVNMAYNISLLHLLKISSAVVSCLASTFSVPLSVYAFTLPLPYIGV 1350 GC GAP+LPLLF+IVNM +NISLLHLLKISSAVVS LASTFSVP++VY FTLPLPY+GV Sbjct: 364 SGCDGAPLLPLLFVIVNMGFNISLLHLLKISSAVVSSLASTFSVPIAVYVFTLPLPYLGV 423 Query: 1351 ASSLPXXXXXXXXXXXXXXXXXXWTP 1428 ASSLP WTP Sbjct: 424 ASSLPTGFVAGAIVLVLGLLIYAWTP 449 >ref|XP_003545164.1| PREDICTED: crt homolog 1-like [Glycine max] Length = 438 Score = 460 bits (1184), Expect = e-127 Identities = 231/326 (70%), Positives = 259/326 (79%), Gaps = 1/326 (0%) Frame = +1 Query: 454 AAAATVILGVGNRVLYKLALVPLKHYPFFLAQLATFGYVLVYFSILYFRYHAGIVTDEML 633 AA ATV+LGVGNRVLYKLALVPLKHYPFFLAQLATFGYV+VYF+ILY R+HAGIVTDEML Sbjct: 99 AAVATVVLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVIVYFAILYIRHHAGIVTDEML 158 Query: 634 SMPKAPFXXXXXXXXXXXXXXXXXXXXXXXTSIPILSQTFLVWQLLLSAIFLGRRYRPNQ 813 PKAPF SIPILSQTFLVWQ+LLS IFLGRRY+ NQ Sbjct: 159 DAPKAPFIVVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYKVNQ 218 Query: 814 IFGCLLVAIGVVITVASGSSGGLSLKDAGVFWTLLMITSFFLQAGDTVLKEIIFLDAARH 993 + GC LV IGVV+TVASG+ G LK+ G+FW+LLMI SFFLQA DTVLKEIIFLD++R Sbjct: 219 LLGCFLVTIGVVVTVASGAGAGNLLKEGGMFWSLLMIVSFFLQAADTVLKEIIFLDSSRK 278 Query: 994 LKGGS-VDLFVLNSYGSAFQAFFICLLLPFLSKLWGVPFSQLPSYLKDGAACFLNIGSLS 1170 LKGG +DLFV+NSYGSAFQA F+CLLLPFLSKLWG+PFSQLP+YLKDGAACFLN G+LS Sbjct: 279 LKGGCCMDLFVVNSYGSAFQALFVCLLLPFLSKLWGIPFSQLPNYLKDGAACFLNFGTLS 338 Query: 1171 KGCQGAPMLPLLFIIVNMAYNISLLHLLKISSAVVSCLASTFSVPLSVYAFTLPLPYIGV 1350 GC GAP+LPLLFIIVN+ +NI+LLHLLKISSAVVSCLASTFSVP+S+Y FT+PLPY+GV Sbjct: 339 SGCDGAPLLPLLFIIVNIGFNIALLHLLKISSAVVSCLASTFSVPISIYVFTMPLPYLGV 398 Query: 1351 ASSLPXXXXXXXXXXXXXXXXXXWTP 1428 ASSLP WTP Sbjct: 399 ASSLPTGFMAGAIILILGLLIYAWTP 424