BLASTX nr result

ID: Coptis21_contig00011059 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011059
         (1738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276436.2| PREDICTED: crt homolog 1-like [Vitis vinifera]    471   e-130
emb|CBI24254.3| unnamed protein product [Vitis vinifera]              469   e-130
ref|XP_003556785.1| PREDICTED: crt homolog 1-like [Glycine max]       467   e-129
ref|XP_002313263.1| predicted protein [Populus trichocarpa] gi|2...   464   e-128
ref|XP_003545164.1| PREDICTED: crt homolog 1-like [Glycine max]       460   e-127

>ref|XP_002276436.2| PREDICTED: crt homolog 1-like [Vitis vinifera]
          Length = 453

 Score =  471 bits (1211), Expect = e-130
 Identities = 246/370 (66%), Positives = 272/370 (73%)
 Frame = +1

Query: 322  WIIESLSQERGNTIVQSDGEDXXXXXXXXXXXXXXXXXXXXXLVAAAATVILGVGNRVLY 501
            W   S  + RG+ +V  + ED                     ++AAA TV+LGVGNRVLY
Sbjct: 76   WSYGSEDRRRGDLVVVEEKEDVGCAGGGCEGDRRMKV-----VIAAAFTVVLGVGNRVLY 130

Query: 502  KLALVPLKHYPFFLAQLATFGYVLVYFSILYFRYHAGIVTDEMLSMPKAPFXXXXXXXXX 681
            KLALVPLKHYPFFLAQLAT GYVLVYFSIL  RY+AGIVTDEMLS+PK P+         
Sbjct: 131  KLALVPLKHYPFFLAQLATVGYVLVYFSILSLRYNAGIVTDEMLSLPKTPYVAVGLLEAL 190

Query: 682  XXXXXXXXXXXXXXTSIPILSQTFLVWQLLLSAIFLGRRYRPNQIFGCLLVAIGVVITVA 861
                           SIPILSQ+FLVWQLLLSAIFLGRRY+ NQ+ GC LVAIGV+ITVA
Sbjct: 191  GAATGMAAGAILSGASIPILSQSFLVWQLLLSAIFLGRRYKVNQLLGCFLVAIGVIITVA 250

Query: 862  SGSSGGLSLKDAGVFWTLLMITSFFLQAGDTVLKEIIFLDAARHLKGGSVDLFVLNSYGS 1041
            SGSS G SLK AG+FW+LLM+ SF  QA DTVLKE IFL AA  LKGGSVDLFV+NSYGS
Sbjct: 251  SGSSAGASLKGAGIFWSLLMMVSFLFQAADTVLKERIFLKAAERLKGGSVDLFVVNSYGS 310

Query: 1042 AFQAFFICLLLPFLSKLWGVPFSQLPSYLKDGAACFLNIGSLSKGCQGAPMLPLLFIIVN 1221
            AFQA FICLLLPFLSKLWGVPFS LP+YLKDGAACFLNIGSLS GC GAP+LPLLF++VN
Sbjct: 311  AFQALFICLLLPFLSKLWGVPFSHLPNYLKDGAACFLNIGSLSSGCDGAPLLPLLFVVVN 370

Query: 1222 MAYNISLLHLLKISSAVVSCLASTFSVPLSVYAFTLPLPYIGVASSLPXXXXXXXXXXXX 1401
            M +NISLLHLLKISSAVVSCLASTFSVP++VY FTLPLPY+GVASSLP            
Sbjct: 371  MGFNISLLHLLKISSAVVSCLASTFSVPIAVYMFTLPLPYLGVASSLPPAFVTGAIILLV 430

Query: 1402 XXXXXXWTPP 1431
                  WTPP
Sbjct: 431  GLMIYAWTPP 440


>emb|CBI24254.3| unnamed protein product [Vitis vinifera]
          Length = 344

 Score =  469 bits (1208), Expect = e-130
 Identities = 239/328 (72%), Positives = 261/328 (79%)
 Frame = +1

Query: 448  LVAAAATVILGVGNRVLYKLALVPLKHYPFFLAQLATFGYVLVYFSILYFRYHAGIVTDE 627
            ++AAA TV+LGVGNRVLYKLALVPLKHYPFFLAQLAT GYVLVYFSIL  RY+AGIVTDE
Sbjct: 4    VIAAAFTVVLGVGNRVLYKLALVPLKHYPFFLAQLATVGYVLVYFSILSLRYNAGIVTDE 63

Query: 628  MLSMPKAPFXXXXXXXXXXXXXXXXXXXXXXXTSIPILSQTFLVWQLLLSAIFLGRRYRP 807
            MLS+PK P+                        SIPILSQ+FLVWQLLLSAIFLGRRY+ 
Sbjct: 64   MLSLPKTPYVAVGLLEALGAATGMAAGAILSGASIPILSQSFLVWQLLLSAIFLGRRYKV 123

Query: 808  NQIFGCLLVAIGVVITVASGSSGGLSLKDAGVFWTLLMITSFFLQAGDTVLKEIIFLDAA 987
            NQ+ GC LVAIGV+ITVASGSS G SLK AG+FW+LLM+ SF  QA DTVLKE IFL AA
Sbjct: 124  NQLLGCFLVAIGVIITVASGSSAGASLKGAGIFWSLLMMVSFLFQAADTVLKERIFLKAA 183

Query: 988  RHLKGGSVDLFVLNSYGSAFQAFFICLLLPFLSKLWGVPFSQLPSYLKDGAACFLNIGSL 1167
              LKGGSVDLFV+NSYGSAFQA FICLLLPFLSKLWGVPFS LP+YLKDGAACFLNIGSL
Sbjct: 184  ERLKGGSVDLFVVNSYGSAFQALFICLLLPFLSKLWGVPFSHLPNYLKDGAACFLNIGSL 243

Query: 1168 SKGCQGAPMLPLLFIIVNMAYNISLLHLLKISSAVVSCLASTFSVPLSVYAFTLPLPYIG 1347
            S GC GAP+LPLLF++VNM +NISLLHLLKISSAVVSCLASTFSVP++VY FTLPLPY+G
Sbjct: 244  SSGCDGAPLLPLLFVVVNMGFNISLLHLLKISSAVVSCLASTFSVPIAVYMFTLPLPYLG 303

Query: 1348 VASSLPXXXXXXXXXXXXXXXXXXWTPP 1431
            VASSLP                  WTPP
Sbjct: 304  VASSLPPAFVTGAIILLVGLMIYAWTPP 331


>ref|XP_003556785.1| PREDICTED: crt homolog 1-like [Glycine max]
          Length = 428

 Score =  467 bits (1201), Expect = e-129
 Identities = 233/333 (69%), Positives = 265/333 (79%)
 Frame = +1

Query: 448  LVAAAATVILGVGNRVLYKLALVPLKHYPFFLAQLATFGYVLVYFSILYFRYHAGIVTDE 627
            ++AAA TV++G GNRVLYKLALVPLK+YPFFLAQLATFGYV+VYFSILY RY AGIVTDE
Sbjct: 92   VLAAAVTVVMGAGNRVLYKLALVPLKNYPFFLAQLATFGYVIVYFSILYIRYRAGIVTDE 151

Query: 628  MLSMPKAPFXXXXXXXXXXXXXXXXXXXXXXXTSIPILSQTFLVWQLLLSAIFLGRRYRP 807
            MLS+PK PF                        SIPILSQ FLVWQ+LLS IFLGRRY+ 
Sbjct: 152  MLSVPKTPFLVVGLLEALGAATGMAAGAMLSGASIPILSQAFLVWQILLSYIFLGRRYKV 211

Query: 808  NQIFGCLLVAIGVVITVASGSSGGLSLKDAGVFWTLLMITSFFLQAGDTVLKEIIFLDAA 987
            NQ+ GC LVAIGV++TVASGS  G SLK+AG+FW+LLMI SF  QA DTVLKE+IFLDA 
Sbjct: 212  NQLVGCFLVAIGVILTVASGSGAGHSLKEAGIFWSLLMIVSFLFQAADTVLKEVIFLDAT 271

Query: 988  RHLKGGSVDLFVLNSYGSAFQAFFICLLLPFLSKLWGVPFSQLPSYLKDGAACFLNIGSL 1167
            R LKGGS+D+FV+NS+GSAFQA FICLLLPFLSKLWGVPF QLP+YLKDGAACFLN+G+L
Sbjct: 272  RKLKGGSLDMFVVNSFGSAFQALFICLLLPFLSKLWGVPFGQLPNYLKDGAACFLNVGTL 331

Query: 1168 SKGCQGAPMLPLLFIIVNMAYNISLLHLLKISSAVVSCLASTFSVPLSVYAFTLPLPYIG 1347
            S+GC GAP+LPLLFIIVNM +NISLLHLLKISSAVVSCLASTFSVP+++Y FTLPLPYIG
Sbjct: 332  SRGCDGAPLLPLLFIIVNMGFNISLLHLLKISSAVVSCLASTFSVPIAIYVFTLPLPYIG 391

Query: 1348 VASSLPXXXXXXXXXXXXXXXXXXWTPPVSTTS 1446
            VASSLP                  WTP  S+++
Sbjct: 392  VASSLPAGFVAGAIILIIGLLIYAWTPSNSSST 424


>ref|XP_002313263.1| predicted protein [Populus trichocarpa] gi|222849671|gb|EEE87218.1|
            predicted protein [Populus trichocarpa]
          Length = 451

 Score =  464 bits (1195), Expect = e-128
 Identities = 233/326 (71%), Positives = 263/326 (80%)
 Frame = +1

Query: 451  VAAAATVILGVGNRVLYKLALVPLKHYPFFLAQLATFGYVLVYFSILYFRYHAGIVTDEM 630
            VAAA TV+LGVGNRVLYKLAL+PLKHYPFFLAQLATFGYV+VYF+IL+ R+ AGIVTDEM
Sbjct: 125  VAAAVTVVLGVGNRVLYKLALLPLKHYPFFLAQLATFGYVIVYFTILHIRHRAGIVTDEM 184

Query: 631  LSMPKAPFXXXXXXXXXXXXXXXXXXXXXXXTSIPILSQTFLVWQLLLSAIFLGRRYRPN 810
            LSMPKAP+                        SIPILSQTFLVWQ+LLS IFLGRRY+ N
Sbjct: 185  LSMPKAPYILVGLLEALGAATGMAAGAILSGASIPILSQTFLVWQILLSTIFLGRRYKVN 244

Query: 811  QIFGCLLVAIGVVITVASGSSGGLSLKDAGVFWTLLMITSFFLQAGDTVLKEIIFLDAAR 990
            Q+ GC LVA+GV+ITVASG S G SL++AG+FW+LLM+ SFFLQA DTVLKE+IF DAA+
Sbjct: 245  QLLGCFLVAVGVIITVASGPSAG-SLREAGIFWSLLMMFSFFLQAADTVLKEVIFSDAAK 303

Query: 991  HLKGGSVDLFVLNSYGSAFQAFFICLLLPFLSKLWGVPFSQLPSYLKDGAACFLNIGSLS 1170
             LKGGSVDLFV+NSYGSAFQA F+CLLLPF+SKLWG+PFSQLP+YLKDGA CFLNIGSLS
Sbjct: 304  QLKGGSVDLFVINSYGSAFQALFVCLLLPFMSKLWGIPFSQLPNYLKDGAVCFLNIGSLS 363

Query: 1171 KGCQGAPMLPLLFIIVNMAYNISLLHLLKISSAVVSCLASTFSVPLSVYAFTLPLPYIGV 1350
             GC GAP+LPLLF+IVNM +NISLLHLLKISSAVVS LASTFSVP++VY FTLPLPY+GV
Sbjct: 364  SGCDGAPLLPLLFVIVNMGFNISLLHLLKISSAVVSSLASTFSVPIAVYVFTLPLPYLGV 423

Query: 1351 ASSLPXXXXXXXXXXXXXXXXXXWTP 1428
            ASSLP                  WTP
Sbjct: 424  ASSLPTGFVAGAIVLVLGLLIYAWTP 449


>ref|XP_003545164.1| PREDICTED: crt homolog 1-like [Glycine max]
          Length = 438

 Score =  460 bits (1184), Expect = e-127
 Identities = 231/326 (70%), Positives = 259/326 (79%), Gaps = 1/326 (0%)
 Frame = +1

Query: 454  AAAATVILGVGNRVLYKLALVPLKHYPFFLAQLATFGYVLVYFSILYFRYHAGIVTDEML 633
            AA ATV+LGVGNRVLYKLALVPLKHYPFFLAQLATFGYV+VYF+ILY R+HAGIVTDEML
Sbjct: 99   AAVATVVLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVIVYFAILYIRHHAGIVTDEML 158

Query: 634  SMPKAPFXXXXXXXXXXXXXXXXXXXXXXXTSIPILSQTFLVWQLLLSAIFLGRRYRPNQ 813
              PKAPF                        SIPILSQTFLVWQ+LLS IFLGRRY+ NQ
Sbjct: 159  DAPKAPFIVVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYKVNQ 218

Query: 814  IFGCLLVAIGVVITVASGSSGGLSLKDAGVFWTLLMITSFFLQAGDTVLKEIIFLDAARH 993
            + GC LV IGVV+TVASG+  G  LK+ G+FW+LLMI SFFLQA DTVLKEIIFLD++R 
Sbjct: 219  LLGCFLVTIGVVVTVASGAGAGNLLKEGGMFWSLLMIVSFFLQAADTVLKEIIFLDSSRK 278

Query: 994  LKGGS-VDLFVLNSYGSAFQAFFICLLLPFLSKLWGVPFSQLPSYLKDGAACFLNIGSLS 1170
            LKGG  +DLFV+NSYGSAFQA F+CLLLPFLSKLWG+PFSQLP+YLKDGAACFLN G+LS
Sbjct: 279  LKGGCCMDLFVVNSYGSAFQALFVCLLLPFLSKLWGIPFSQLPNYLKDGAACFLNFGTLS 338

Query: 1171 KGCQGAPMLPLLFIIVNMAYNISLLHLLKISSAVVSCLASTFSVPLSVYAFTLPLPYIGV 1350
             GC GAP+LPLLFIIVN+ +NI+LLHLLKISSAVVSCLASTFSVP+S+Y FT+PLPY+GV
Sbjct: 339  SGCDGAPLLPLLFIIVNIGFNIALLHLLKISSAVVSCLASTFSVPISIYVFTMPLPYLGV 398

Query: 1351 ASSLPXXXXXXXXXXXXXXXXXXWTP 1428
            ASSLP                  WTP
Sbjct: 399  ASSLPTGFMAGAIILILGLLIYAWTP 424


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