BLASTX nr result

ID: Coptis21_contig00011057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011057
         (1216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633697.1| PREDICTED: uncharacterized protein LOC100263...   521   e-145
emb|CBI22317.3| unnamed protein product [Vitis vinifera]              521   e-145
ref|XP_002268541.2| PREDICTED: ribosome production factor 1-like...   516   e-144
gb|AGG38111.1| maternal effect embryo arrest 49-1 protein [Dimoc...   513   e-143
ref|XP_002302686.1| predicted protein [Populus trichocarpa] gi|2...   507   e-141

>ref|XP_003633697.1| PREDICTED: uncharacterized protein LOC100263155 [Vitis vinifera]
          Length = 801

 Score =  521 bits (1341), Expect = e-145
 Identities = 260/326 (79%), Positives = 275/326 (84%), Gaps = 5/326 (1%)
 Frame = -3

Query: 1202 KREILPSLIKNKQKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXALELGEEPPVKAIPRTI 1023
            K++ILPS+IKNK KR                            ALELGEEPPVKAIPRTI
Sbjct: 476  KKQILPSMIKNKDKRSAVHAKLKHQKKIEKRKKAKAREAAEKRALELGEEPPVKAIPRTI 535

Query: 1022 ENTREVDETVCMPDDQELFAGNDADEFSSILKRESAPKILITTCRFNSSRGPAFISELLS 843
            ENTRE DETVC PDD+ELFAGNDADEFSSIL R+S PKILITTCRFNS+RGPAFISELLS
Sbjct: 536  ENTREFDETVCKPDDEELFAGNDADEFSSILNRKSDPKILITTCRFNSTRGPAFISELLS 595

Query: 842  VIPNAHYYKRGTYDLKKIVEYANNKNFTSIIVVHTNRREPDALLVMSLPDGPTAHFKLSN 663
            VIPNAHYYKRGTYDLKKIVEYA  K+FTS+IVVHTNRREPDALL++ LPDGPTAHFKLS 
Sbjct: 596  VIPNAHYYKRGTYDLKKIVEYAKIKDFTSLIVVHTNRREPDALLIIGLPDGPTAHFKLSK 655

Query: 662  LVLRKDIKNHGNPTSHKPELVLNNFTTRLGHRIGRMIQSLFPQDPNFRGRRVVTFHNQRD 483
            LVL KD+KNHGNPTSH PELVLNNFTTRLGHRIGRMIQSLFPQ PNFRGRRVVTFHNQRD
Sbjct: 656  LVLHKDVKNHGNPTSHIPELVLNNFTTRLGHRIGRMIQSLFPQAPNFRGRRVVTFHNQRD 715

Query: 482  FIFFRHHRYVFDSKES-----KGTKAKDAKGENTLQGNVVARLQECGPRFTLKLTSLQHG 318
            FIFFRHHRY+F+SKES     KG K KDAKGE + QG VVARLQECGPRFTLKL +LQHG
Sbjct: 716  FIFFRHHRYIFESKESKQGDTKGNKDKDAKGEKSSQGKVVARLQECGPRFTLKLINLQHG 775

Query: 317  TFDTKGGEYEWVHKPEMDTSRRRFFL 240
            TFDTKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 776  TFDTKGGEYEWVHKPEMDTSRRRFFL 801


>emb|CBI22317.3| unnamed protein product [Vitis vinifera]
          Length = 346

 Score =  521 bits (1341), Expect = e-145
 Identities = 260/326 (79%), Positives = 275/326 (84%), Gaps = 5/326 (1%)
 Frame = -3

Query: 1202 KREILPSLIKNKQKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXALELGEEPPVKAIPRTI 1023
            K++ILPS+IKNK KR                            ALELGEEPPVKAIPRTI
Sbjct: 21   KKQILPSMIKNKDKRSAVHAKLKHQKKIEKRKKAKAREAAEKRALELGEEPPVKAIPRTI 80

Query: 1022 ENTREVDETVCMPDDQELFAGNDADEFSSILKRESAPKILITTCRFNSSRGPAFISELLS 843
            ENTRE DETVC PDD+ELFAGNDADEFSSIL R+S PKILITTCRFNS+RGPAFISELLS
Sbjct: 81   ENTREFDETVCKPDDEELFAGNDADEFSSILNRKSDPKILITTCRFNSTRGPAFISELLS 140

Query: 842  VIPNAHYYKRGTYDLKKIVEYANNKNFTSIIVVHTNRREPDALLVMSLPDGPTAHFKLSN 663
            VIPNAHYYKRGTYDLKKIVEYA  K+FTS+IVVHTNRREPDALL++ LPDGPTAHFKLS 
Sbjct: 141  VIPNAHYYKRGTYDLKKIVEYAKIKDFTSLIVVHTNRREPDALLIIGLPDGPTAHFKLSK 200

Query: 662  LVLRKDIKNHGNPTSHKPELVLNNFTTRLGHRIGRMIQSLFPQDPNFRGRRVVTFHNQRD 483
            LVL KD+KNHGNPTSH PELVLNNFTTRLGHRIGRMIQSLFPQ PNFRGRRVVTFHNQRD
Sbjct: 201  LVLHKDVKNHGNPTSHIPELVLNNFTTRLGHRIGRMIQSLFPQAPNFRGRRVVTFHNQRD 260

Query: 482  FIFFRHHRYVFDSKES-----KGTKAKDAKGENTLQGNVVARLQECGPRFTLKLTSLQHG 318
            FIFFRHHRY+F+SKES     KG K KDAKGE + QG VVARLQECGPRFTLKL +LQHG
Sbjct: 261  FIFFRHHRYIFESKESKQGDTKGNKDKDAKGEKSSQGKVVARLQECGPRFTLKLINLQHG 320

Query: 317  TFDTKGGEYEWVHKPEMDTSRRRFFL 240
            TFDTKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 321  TFDTKGGEYEWVHKPEMDTSRRRFFL 346


>ref|XP_002268541.2| PREDICTED: ribosome production factor 1-like [Vitis vinifera]
          Length = 346

 Score =  516 bits (1329), Expect = e-144
 Identities = 257/326 (78%), Positives = 273/326 (83%), Gaps = 5/326 (1%)
 Frame = -3

Query: 1202 KREILPSLIKNKQKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXALELGEEPPVKAIPRTI 1023
            K++ILPS+IKNK+KR                            ALELGEEPP K IP TI
Sbjct: 21   KKQILPSMIKNKEKRSAVHAKLKHQKKIEKRKKAKAREAAEKRALELGEEPPAKKIPHTI 80

Query: 1022 ENTREVDETVCMPDDQELFAGNDADEFSSILKRESAPKILITTCRFNSSRGPAFISELLS 843
            ENTRE DETVC PDD+ELFAGNDADEFSSIL R+S PKILITTCRFNS+RGPAFISELLS
Sbjct: 81   ENTREFDETVCKPDDEELFAGNDADEFSSILNRKSDPKILITTCRFNSTRGPAFISELLS 140

Query: 842  VIPNAHYYKRGTYDLKKIVEYANNKNFTSIIVVHTNRREPDALLVMSLPDGPTAHFKLSN 663
            VIPNAHYYKRGTYDLKKIVEYA  K+FTS+IVVHTNRREPDALL++ LPDGPTAHFKLS 
Sbjct: 141  VIPNAHYYKRGTYDLKKIVEYAKKKDFTSLIVVHTNRREPDALLIIGLPDGPTAHFKLSK 200

Query: 662  LVLRKDIKNHGNPTSHKPELVLNNFTTRLGHRIGRMIQSLFPQDPNFRGRRVVTFHNQRD 483
            LVLRKD+KNHGNPTSH PELVLNNFTTRLGHRIGRMIQSLFPQ PNF GRRVVTFHNQRD
Sbjct: 201  LVLRKDVKNHGNPTSHIPELVLNNFTTRLGHRIGRMIQSLFPQAPNFGGRRVVTFHNQRD 260

Query: 482  FIFFRHHRYVFDSKE-----SKGTKAKDAKGENTLQGNVVARLQECGPRFTLKLTSLQHG 318
            FIFFRHHRY+F+SKE     SKG K KDAKGE + +G VVARLQECGPRFTLKL SLQHG
Sbjct: 261  FIFFRHHRYIFESKESKQGDSKGNKDKDAKGEKSSRGKVVARLQECGPRFTLKLISLQHG 320

Query: 317  TFDTKGGEYEWVHKPEMDTSRRRFFL 240
            TFDTKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 321  TFDTKGGEYEWVHKPEMDTSRRRFFL 346


>gb|AGG38111.1| maternal effect embryo arrest 49-1 protein [Dimocarpus longan]
          Length = 354

 Score =  513 bits (1320), Expect = e-143
 Identities = 251/330 (76%), Positives = 273/330 (82%), Gaps = 5/330 (1%)
 Frame = -3

Query: 1214 SVNKKREILPSLIKNKQKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXALELGEEPPVKAI 1035
            S  KKREI+PS+IKNK+KR                            ALELGEEPP + +
Sbjct: 25   SNKKKREIMPSMIKNKEKRSSVHAKLKHQKKLEKRKKLKARDAAEKRALELGEEPPARMV 84

Query: 1034 PRTIENTREVDETVCMPDDQELFAGNDADEFSSILKRESAPKILITTCRFNSSRGPAFIS 855
            PRTIENTRE DETVC PDD ELFAGNDADEF+S+LK+E  PKIL+TTCRFNSSRGP FI 
Sbjct: 85   PRTIENTREPDETVCRPDDDELFAGNDADEFNSVLKQERTPKILMTTCRFNSSRGPVFIK 144

Query: 854  ELLSVIPNAHYYKRGTYDLKKIVEYANNKNFTSIIVVHTNRREPDALLVMSLPDGPTAHF 675
            ELL+VIPNAHYYKRGTYDLKKIV+YAN K+FTSIIVVHTNRREPDALL++ LP+GPTAHF
Sbjct: 145  ELLTVIPNAHYYKRGTYDLKKIVDYANKKDFTSIIVVHTNRREPDALLMIGLPNGPTAHF 204

Query: 674  KLSNLVLRKDIKNHGNPTSHKPELVLNNFTTRLGHRIGRMIQSLFPQDPNFRGRRVVTFH 495
            KLS LVLRKDIKNHGNPTSHKPEL+LNNFTTRLGHRIGR+IQSLFPQDP FRGRRVVTFH
Sbjct: 205  KLSKLVLRKDIKNHGNPTSHKPELILNNFTTRLGHRIGRLIQSLFPQDPEFRGRRVVTFH 264

Query: 494  NQRDFIFFRHHRYVFDSKE-----SKGTKAKDAKGENTLQGNVVARLQECGPRFTLKLTS 330
            NQRDFIFFRHHRY+F++KE     SKG K KDAKGE   Q   +ARLQECGPRFTLKL S
Sbjct: 265  NQRDFIFFRHHRYIFETKESKVRDSKGKKVKDAKGEKITQEKTIARLQECGPRFTLKLIS 324

Query: 329  LQHGTFDTKGGEYEWVHKPEMDTSRRRFFL 240
            LQHGTFDTKGGE+EWVHKPEMDTSRRRFFL
Sbjct: 325  LQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 354


>ref|XP_002302686.1| predicted protein [Populus trichocarpa] gi|222844412|gb|EEE81959.1|
            predicted protein [Populus trichocarpa]
          Length = 361

 Score =  507 bits (1305), Expect = e-141
 Identities = 252/327 (77%), Positives = 270/327 (82%), Gaps = 5/327 (1%)
 Frame = -3

Query: 1205 KKREILPSLIKNKQKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXALELGEEPPVKAIPRT 1026
            K REILPS+IKNK+KR                            ALELGEEPP + IPRT
Sbjct: 35   KTREILPSMIKNKEKRSAVHAKLKHEKKVEKRKKLKARDAEEKRALELGEEPPPRKIPRT 94

Query: 1025 IENTREVDETVCMPDDQELFAGNDADEFSSILKRESAPKILITTCRFNSSRGPAFISELL 846
            IENTRE DETVC PDD+ELFAGNDADEFSSILKRE  PKILITT RFNS+RGPAFISELL
Sbjct: 95   IENTRENDETVCKPDDEELFAGNDADEFSSILKRERTPKILITTSRFNSTRGPAFISELL 154

Query: 845  SVIPNAHYYKRGTYDLKKIVEYANNKNFTSIIVVHTNRREPDALLVMSLPDGPTAHFKLS 666
             VIPNAHYYKRGTYDLKKIVEYA  ++FTS+IVVHTNRREPDALL++ LPDGPTAHFKLS
Sbjct: 155  QVIPNAHYYKRGTYDLKKIVEYAKKQDFTSLIVVHTNRREPDALLIIGLPDGPTAHFKLS 214

Query: 665  NLVLRKDIKNHGNPTSHKPELVLNNFTTRLGHRIGRMIQSLFPQDPNFRGRRVVTFHNQR 486
             LVLRKDIKNHGNPTSH+PELVL NFTTRLGHR GR+IQSLFPQ+PNFRGRRVVTFHNQR
Sbjct: 215  RLVLRKDIKNHGNPTSHEPELVLTNFTTRLGHRAGRIIQSLFPQEPNFRGRRVVTFHNQR 274

Query: 485  DFIFFRHHRYVFDSKE-----SKGTKAKDAKGENTLQGNVVARLQECGPRFTLKLTSLQH 321
            D+IFFRHHRY+F++KE     SKG K KD KGE   Q  V+ARLQECGPRFTLKL SLQH
Sbjct: 275  DYIFFRHHRYIFETKESKQSDSKGKKGKDGKGEKISQQKVIARLQECGPRFTLKLRSLQH 334

Query: 320  GTFDTKGGEYEWVHKPEMDTSRRRFFL 240
            GTFDTKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 335  GTFDTKGGEYEWVHKPEMDTSRRRFFL 361


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