BLASTX nr result

ID: Coptis21_contig00011056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011056
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140518.1| PREDICTED: poly(rC)-binding protein 2-like [...    77   1e-12
gb|ADN34230.1| hypothetical protein [Cucumis melo subsp. melo]         77   1e-12
ref|XP_002272998.2| PREDICTED: KH domain-containing protein At4g...    77   2e-12
emb|CBI16638.3| unnamed protein product [Vitis vinifera]               77   2e-12
emb|CAN66855.1| hypothetical protein VITISV_039970 [Vitis vinifera]    77   2e-12

>ref|XP_004140518.1| PREDICTED: poly(rC)-binding protein 2-like [Cucumis sativus]
           gi|449529952|ref|XP_004171961.1| PREDICTED:
           poly(rC)-binding protein 2-like [Cucumis sativus]
          Length = 276

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 43/91 (47%), Positives = 59/91 (64%)
 Frame = -1

Query: 278 LSLPTHTLTGRNQQEQVTAKRTLSGAFNAEEQTDSQSLK*RTIPHDVLFRLVVPSRHIGR 99
           +S P HT+TG+ ++E            +  + +D  + K +   HDVLFR+VVPS+ IG+
Sbjct: 30  VSEPGHTVTGKRRREDDLI-------VSNSDASDISAPKRQAKAHDVLFRIVVPSKQIGK 82

Query: 98  VIVKEGTRIQKIREDTRANIKIADAVTREEE 6
           VI K G RIQK+RE+T+A IKIADAV R EE
Sbjct: 83  VIGKVGCRIQKVREETKATIKIADAVARYEE 113


>gb|ADN34230.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 331

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 43/91 (47%), Positives = 59/91 (64%)
 Frame = -1

Query: 278 LSLPTHTLTGRNQQEQVTAKRTLSGAFNAEEQTDSQSLK*RTIPHDVLFRLVVPSRHIGR 99
           +S P HT+TG+ ++E            +  + +D  + K +   HDVLFR+VVPS+ IG+
Sbjct: 30  VSEPGHTVTGKRRREDDLI-------VSNSDASDVSAPKRQAKAHDVLFRIVVPSKQIGK 82

Query: 98  VIVKEGTRIQKIREDTRANIKIADAVTREEE 6
           VI K G RIQK+RE+T+A IKIADAV R EE
Sbjct: 83  VIGKVGCRIQKVREETKATIKIADAVARYEE 113


>ref|XP_002272998.2| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
           vinifera]
          Length = 343

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 47/90 (52%), Positives = 55/90 (61%)
 Frame = -1

Query: 275 SLPTHTLTGRNQQEQVTAKRTLSGAFNAEEQTDSQSLK*RTIPHDVLFRLVVPSRHIGRV 96
           S PT     R+    V A  T       E   D +S K R    DVLFR+VVPSR IG+V
Sbjct: 21  SEPTSMKRPRDDDGGVIASAT------GEVADDHRSPKRRAKNQDVLFRIVVPSRQIGKV 74

Query: 95  IVKEGTRIQKIREDTRANIKIADAVTREEE 6
           I KEG+RIQKIRE+T+A IKIADA+ R EE
Sbjct: 75  IGKEGSRIQKIREETKATIKIADAIARHEE 104


>emb|CBI16638.3| unnamed protein product [Vitis vinifera]
          Length = 346

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 47/90 (52%), Positives = 55/90 (61%)
 Frame = -1

Query: 275 SLPTHTLTGRNQQEQVTAKRTLSGAFNAEEQTDSQSLK*RTIPHDVLFRLVVPSRHIGRV 96
           S PT     R+    V A  T       E   D +S K R    DVLFR+VVPSR IG+V
Sbjct: 21  SEPTSMKRPRDDDGGVIASAT------GEVADDHRSPKRRAKNQDVLFRIVVPSRQIGKV 74

Query: 95  IVKEGTRIQKIREDTRANIKIADAVTREEE 6
           I KEG+RIQKIRE+T+A IKIADA+ R EE
Sbjct: 75  IGKEGSRIQKIREETKATIKIADAIARHEE 104


>emb|CAN66855.1| hypothetical protein VITISV_039970 [Vitis vinifera]
          Length = 153

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 47/90 (52%), Positives = 55/90 (61%)
 Frame = -1

Query: 275 SLPTHTLTGRNQQEQVTAKRTLSGAFNAEEQTDSQSLK*RTIPHDVLFRLVVPSRHIGRV 96
           S PT     R+    V A  T       E   D +S K R    DVLFR+VVPSR IG+V
Sbjct: 21  SEPTSMKRPRDDDGGVIASAT------GEVADDHRSPKRRAKNQDVLFRIVVPSRQIGKV 74

Query: 95  IVKEGTRIQKIREDTRANIKIADAVTREEE 6
           I KEG+RIQKIRE+T+A IKIADA+ R EE
Sbjct: 75  IGKEGSRIQKIREETKATIKIADAIARHEE 104