BLASTX nr result

ID: Coptis21_contig00011048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011048
         (724 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR14728.1| ubiquitin conjugating enzyme [Gossypium hirsutum]      291   1e-76
ref|XP_002280882.1| PREDICTED: probable ubiquitin-conjugating en...   290   2e-76
ref|XP_002306892.1| predicted protein [Populus trichocarpa] gi|1...   287   2e-75
ref|XP_004146492.1| PREDICTED: probable ubiquitin-conjugating en...   285   5e-75
ref|XP_002302012.1| predicted protein [Populus trichocarpa] gi|1...   283   2e-74

>gb|ABR14728.1| ubiquitin conjugating enzyme [Gossypium hirsutum]
          Length = 161

 Score =  291 bits (744), Expect = 1e-76
 Identities = 134/154 (87%), Positives = 136/154 (88%)
 Frame = +1

Query: 4   SRKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGASGTLYTNETYQLQV 183
           SRKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRW+IEVNGA GT+Y NETYQLQV
Sbjct: 8   SRKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWIIEVNGAPGTIYANETYQLQV 67

Query: 184 DFPEHYPMEAPQVIFIPPAPLHPHIYSNGHICLDILYDSWSPAMTVXXXXXXXXXXXXXX 363
           DFPEHYPMEAPQVIFIPPAPLHPHIYSNGHICLDILYDSWSPAMTV              
Sbjct: 68  DFPEHYPMEAPQVIFIPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSSA 127

Query: 364 TAKQRPADNDRYVKNCRNGRSPKETRWWFHDDKV 465
           T KQRP DNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 128 TLKQRPTDNDRYVKNCRNGRSPKETRWWFHDDKV 161


>ref|XP_002280882.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 18 [Vitis
           vinifera] gi|147844523|emb|CAN82081.1| hypothetical
           protein VITISV_011314 [Vitis vinifera]
           gi|302142559|emb|CBI19762.3| unnamed protein product
           [Vitis vinifera]
          Length = 161

 Score =  290 bits (742), Expect = 2e-76
 Identities = 133/155 (85%), Positives = 137/155 (88%)
 Frame = +1

Query: 1   PSRKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGASGTLYTNETYQLQ 180
           PSRK LSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGA GTLY NE+YQLQ
Sbjct: 7   PSRKVLSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYANESYQLQ 66

Query: 181 VDFPEHYPMEAPQVIFIPPAPLHPHIYSNGHICLDILYDSWSPAMTVXXXXXXXXXXXXX 360
           VDFPE+YPMEAPQV+F+PPAPLHPHIYSNGHICLDILYDSWSPAMTV             
Sbjct: 67  VDFPENYPMEAPQVVFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSS 126

Query: 361 XTAKQRPADNDRYVKNCRNGRSPKETRWWFHDDKV 465
            T KQRPADNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 127 STVKQRPADNDRYVKNCRNGRSPKETRWWFHDDKV 161


>ref|XP_002306892.1| predicted protein [Populus trichocarpa] gi|118487824|gb|ABK95735.1|
           unknown [Populus trichocarpa]
           gi|222856341|gb|EEE93888.1| predicted protein [Populus
           trichocarpa]
          Length = 161

 Score =  287 bits (734), Expect = 2e-75
 Identities = 132/154 (85%), Positives = 136/154 (88%)
 Frame = +1

Query: 4   SRKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGASGTLYTNETYQLQV 183
           SRKALSKIACNRLQKEL EWQ+NPP+GFKHKVTDNLQRWVIEVNGA+GTLY NETYQLQV
Sbjct: 8   SRKALSKIACNRLQKELAEWQLNPPSGFKHKVTDNLQRWVIEVNGAAGTLYANETYQLQV 67

Query: 184 DFPEHYPMEAPQVIFIPPAPLHPHIYSNGHICLDILYDSWSPAMTVXXXXXXXXXXXXXX 363
           DFPEHYPMEAPQVIF PPAPLHPHIYSNGHICLDILYDSWSPAMTV              
Sbjct: 68  DFPEHYPMEAPQVIFAPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSSS 127

Query: 364 TAKQRPADNDRYVKNCRNGRSPKETRWWFHDDKV 465
           T KQRPADNDRYVKNCR+GRSPKETRWWFHDDKV
Sbjct: 128 TVKQRPADNDRYVKNCRSGRSPKETRWWFHDDKV 161


>ref|XP_004146492.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 16-like
           [Cucumis sativus]
          Length = 161

 Score =  285 bits (730), Expect = 5e-75
 Identities = 133/152 (87%), Positives = 134/152 (88%)
 Frame = +1

Query: 10  KALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGASGTLYTNETYQLQVDF 189
           KALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGA GTLY NETYQLQVDF
Sbjct: 10  KALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYANETYQLQVDF 69

Query: 190 PEHYPMEAPQVIFIPPAPLHPHIYSNGHICLDILYDSWSPAMTVXXXXXXXXXXXXXXTA 369
           PEHYPMEAPQVIF+ PAPLHPHIYSNGHICLDILYDSWSPAMTV              TA
Sbjct: 70  PEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICINIFSMLSSSTA 129

Query: 370 KQRPADNDRYVKNCRNGRSPKETRWWFHDDKV 465
           KQRP DNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 130 KQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 161


>ref|XP_002302012.1| predicted protein [Populus trichocarpa] gi|118484075|gb|ABK93923.1|
           unknown [Populus trichocarpa]
           gi|222843738|gb|EEE81285.1| predicted protein [Populus
           trichocarpa]
          Length = 161

 Score =  283 bits (725), Expect = 2e-74
 Identities = 130/154 (84%), Positives = 135/154 (87%)
 Frame = +1

Query: 4   SRKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGASGTLYTNETYQLQV 183
           SRKALSKIACNRLQKEL EWQ++PP+GFKHKVTDNLQRWVIE NGA+GTLY NETYQLQV
Sbjct: 8   SRKALSKIACNRLQKELTEWQLSPPSGFKHKVTDNLQRWVIEANGAAGTLYANETYQLQV 67

Query: 184 DFPEHYPMEAPQVIFIPPAPLHPHIYSNGHICLDILYDSWSPAMTVXXXXXXXXXXXXXX 363
           DFPEHYPMEAPQVIF PPAPLHPHIYSNGHICLDILYDSWSPAMTV              
Sbjct: 68  DFPEHYPMEAPQVIFAPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSSA 127

Query: 364 TAKQRPADNDRYVKNCRNGRSPKETRWWFHDDKV 465
           T KQRPADNDRYVKNCR+GRSPKETRWWFHDDKV
Sbjct: 128 TVKQRPADNDRYVKNCRSGRSPKETRWWFHDDKV 161


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