BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011046
         (621 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32533.3| unnamed protein product [Vitis vinifera]              179   5e-43
ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containi...   179   5e-43
ref|XP_002306075.1| predicted protein [Populus trichocarpa] gi|2...   170   2e-40
ref|XP_002519113.1| pentatricopeptide repeat-containing protein,...   167   1e-39
ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containi...   155   4e-36

>emb|CBI32533.3| unnamed protein product [Vitis vinifera]
          Length = 299

 Score =  179 bits (453), Expect = 5e-43
 Identities = 84/155 (54%), Positives = 117/155 (75%)
 Frame = +1

Query: 4   IFRQMEMDRIEATCLTFEHLIRGYCEAGDVESAMLLYKNMCRTKEFRPEVFTVEEVIRAM 183
           +FR+ME+  I++TC+T+EHLI GYCE GDV+SA+LLYK+MCR K FR E  TV+ +I  +
Sbjct: 144 LFREMELSGIQSTCVTYEHLINGYCEIGDVDSAVLLYKDMCR-KGFRAEARTVDGMILLL 202

Query: 184 CGKNKIFDALKFFRDAVKRHGLCLSGRSYEFLIRGLCEEGKMEDALKLQTEMVGKGFEPS 363
           C   ++ +ALK  R A+        G+SYE LI+G CEEGKME+A KLQ+EMVGKGF+P+
Sbjct: 203 CNNRRVHEALKLLRVAMGNVEFAPRGKSYETLIKGFCEEGKMEEASKLQSEMVGKGFKPT 262

Query: 364 VEVYNCFISGYSRQGNEELSRNLRKEMVDFGLKQE 468
           +E+Y+ FI GY +QGN+E++  LRKEM +  ++QE
Sbjct: 263 LEIYSAFIDGYMKQGNKEIAETLRKEMFETQMQQE 297


>ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Vitis vinifera]
          Length = 492

 Score =  179 bits (453), Expect = 5e-43
 Identities = 84/155 (54%), Positives = 117/155 (75%)
 Frame = +1

Query: 4   IFRQMEMDRIEATCLTFEHLIRGYCEAGDVESAMLLYKNMCRTKEFRPEVFTVEEVIRAM 183
           +FR+ME+  I++TC+T+EHLI GYCE GDV+SA+LLYK+MCR K FR E  TV+ +I  +
Sbjct: 337 LFREMELSGIQSTCVTYEHLINGYCEIGDVDSAVLLYKDMCR-KGFRAEARTVDGMILLL 395

Query: 184 CGKNKIFDALKFFRDAVKRHGLCLSGRSYEFLIRGLCEEGKMEDALKLQTEMVGKGFEPS 363
           C   ++ +ALK  R A+        G+SYE LI+G CEEGKME+A KLQ+EMVGKGF+P+
Sbjct: 396 CNNRRVHEALKLLRVAMGNVEFAPRGKSYETLIKGFCEEGKMEEASKLQSEMVGKGFKPT 455

Query: 364 VEVYNCFISGYSRQGNEELSRNLRKEMVDFGLKQE 468
           +E+Y+ FI GY +QGN+E++  LRKEM +  ++QE
Sbjct: 456 LEIYSAFIDGYMKQGNKEIAETLRKEMFETQMQQE 490


>ref|XP_002306075.1| predicted protein [Populus trichocarpa] gi|222849039|gb|EEE86586.1|
           predicted protein [Populus trichocarpa]
          Length = 498

 Score =  170 bits (431), Expect = 2e-40
 Identities = 82/164 (50%), Positives = 119/164 (72%)
 Frame = +1

Query: 4   IFRQMEMDRIEATCLTFEHLIRGYCEAGDVESAMLLYKNMCRTKEFRPEVFTVEEVIRAM 183
           +FR+M +  IE++C+TFEHLI GYC  GDV SA+L+YK+M R ++FR E  T+E +I  +
Sbjct: 339 LFREMGLSGIESSCVTFEHLIEGYCRIGDVNSAILVYKDM-RRRDFRLEALTMEVLIGGL 397

Query: 184 CGKNKIFDALKFFRDAVKRHGLCLSGRSYEFLIRGLCEEGKMEDALKLQTEMVGKGFEPS 363
           C + ++F+ALK  R A++      +G+SYE LI GLCE+GKME+ALKLQ+EMVGKGF+P+
Sbjct: 398 CEQKRVFEALKIMRSAMRDVSFHPNGKSYELLINGLCEDGKMEEALKLQSEMVGKGFDPN 457

Query: 364 VEVYNCFISGYSRQGNEELSRNLRKEMVDFGLKQEGDEQDELTN 495
             +Y  FI GY + GNEE++  LRKEM    + Q+  ++D +T+
Sbjct: 458 SAIYGAFIEGYVKLGNEEMAAMLRKEM---SVAQKQQQEDNVTD 498


>ref|XP_002519113.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541776|gb|EEF43324.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 486

 Score =  167 bits (424), Expect = 1e-39
 Identities = 80/153 (52%), Positives = 112/153 (73%)
 Frame = +1

Query: 10  RQMEMDRIEATCLTFEHLIRGYCEAGDVESAMLLYKNMCRTKEFRPEVFTVEEVIRAMCG 189
           R+ME++ +EA C+TFEHLI GYC  GDV+SA+L++K+M R K FR E   ++ +I  +C 
Sbjct: 333 REMELNGVEANCVTFEHLINGYCSVGDVDSAILVFKHMVR-KGFRAEGSVMDVLIGGLCE 391

Query: 190 KNKIFDALKFFRDAVKRHGLCLSGRSYEFLIRGLCEEGKMEDALKLQTEMVGKGFEPSVE 369
           K ++ +AL+  R A++  G  LSG+SYE LI+GLC++GKM++ALKLQ EMVG GFEP+ E
Sbjct: 392 KRRVSEALEIMRIAMRNDGFRLSGKSYELLIKGLCKDGKMDEALKLQAEMVGGGFEPNFE 451

Query: 370 VYNCFISGYSRQGNEELSRNLRKEMVDFGLKQE 468
           +Y  FI GY + GNEE++  LRKEM     +QE
Sbjct: 452 IYGAFIDGYMKLGNEEMAAMLRKEMSGIQKRQE 484


>ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Glycine max]
          Length = 487

 Score =  155 bits (393), Expect = 4e-36
 Identities = 72/147 (48%), Positives = 108/147 (73%)
 Frame = +1

Query: 7   FRQMEMDRIEATCLTFEHLIRGYCEAGDVESAMLLYKNMCRTKEFRPEVFTVEEVIRAMC 186
           FR+M +  +  T  T+EHL++GYC  GDV+SA+L+YK+M R+ + RP+  T++ +IR +C
Sbjct: 336 FREMAVAGVGTTASTYEHLVKGYCNIGDVDSAVLVYKDMARS-DLRPDASTLDVMIRLLC 394

Query: 187 GKNKIFDALKFFRDAVKRHGLCLSGRSYEFLIRGLCEEGKMEDALKLQTEMVGKGFEPSV 366
            K ++ ++L+F R AV +  L    +SYE LI+GLC +G+ME+ALK+Q EMVGKGF+P+ 
Sbjct: 395 DKGRVRESLEFVRCAVGKFDLIPMEKSYEALIKGLCFDGRMEEALKVQAEMVGKGFQPNS 454

Query: 367 EVYNCFISGYSRQGNEELSRNLRKEMV 447
           E+Y  F+ GY R GNEE++  LRKEM+
Sbjct: 455 EIYGAFVDGYVRHGNEEMAEALRKEML 481