BLASTX nr result

ID: Coptis21_contig00011043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011043
         (671 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95443.1| unknown [Populus trichocarpa]                          175   8e-42
ref|XP_002262807.1| PREDICTED: uncharacterized protein LOC100265...   172   5e-41
dbj|BAB09328.1| unnamed protein product [Arabidopsis thaliana]        169   3e-40
ref|XP_002863762.1| hypothetical protein ARALYDRAFT_494776 [Arab...   169   3e-40
ref|NP_568607.1| B-cell receptor-associated 31-like protein [Ara...   169   3e-40

>gb|ABK95443.1| unknown [Populus trichocarpa]
          Length = 219

 Score =  175 bits (443), Expect = 8e-42
 Identities = 93/143 (65%), Positives = 113/143 (79%)
 Frame = -2

Query: 598 MIQLLFSVIGFEIGLIMILMFKTPLRKLVIMSLDNVKRGRGPVVVKTIGGTVCIVLMSSV 419
           MIQLLF+VI  E+ +I++ +FKTPLRKL+IMSLD VKRGRGPV+VKT+ GTV +VLMSSV
Sbjct: 1   MIQLLFTVIFSEMAMILLFVFKTPLRKLLIMSLDRVKRGRGPVMVKTVAGTVFVVLMSSV 60

Query: 418 YSLIKIQKRXXXXXXXXXXSTDQVLFSKNLLEASLMGFSLFLALMIDRQHHYIRELRMLR 239
           YS++KIQKR           TDQVL +K+LLEA+LMG  LFL LMIDR HHYIRELRM R
Sbjct: 61  YSMVKIQKR-WIDDGGAVNPTDQVLLAKHLLEATLMGSILFLGLMIDRLHHYIRELRMRR 119

Query: 238 KNMEDVKKENRAVED*ELTPQKS 170
           K MEDVKK+NR+ ED ++   K+
Sbjct: 120 KTMEDVKKQNRSFEDGKVEETKA 142


>ref|XP_002262807.1| PREDICTED: uncharacterized protein LOC100265893 [Vitis vinifera]
           gi|302144107|emb|CBI23212.3| unnamed protein product
           [Vitis vinifera]
          Length = 221

 Score =  172 bits (436), Expect = 5e-41
 Identities = 89/135 (65%), Positives = 109/135 (80%)
 Frame = -2

Query: 598 MIQLLFSVIGFEIGLIMILMFKTPLRKLVIMSLDNVKRGRGPVVVKTIGGTVCIVLMSSV 419
           MIQLLF+VI  E+ +IM+L+FKTPLRKLVIM LD VKRGRGP++VKT+  TV +VL+SSV
Sbjct: 1   MIQLLFTVIFAEMAMIMVLLFKTPLRKLVIMGLDRVKRGRGPIMVKTVAATVLVVLISSV 60

Query: 418 YSLIKIQKRXXXXXXXXXXSTDQVLFSKNLLEASLMGFSLFLALMIDRQHHYIRELRMLR 239
           YS++KI+KR           TDQVL +K+LLE SLMGF+LFLALMIDR HHYIRELR+ R
Sbjct: 61  YSMMKIRKR--GIDDDVVNPTDQVLMAKHLLETSLMGFTLFLALMIDRLHHYIRELRLRR 118

Query: 238 KNMEDVKKENRAVED 194
           K+ME +KK+NR  ED
Sbjct: 119 KSMEAIKKQNRGFED 133


>dbj|BAB09328.1| unnamed protein product [Arabidopsis thaliana]
          Length = 252

 Score =  169 bits (429), Expect = 3e-40
 Identities = 89/139 (64%), Positives = 109/139 (78%)
 Frame = -2

Query: 598 MIQLLFSVIGFEIGLIMILMFKTPLRKLVIMSLDNVKRGRGPVVVKTIGGTVCIVLMSSV 419
           MI LL++VI  E+ LI++L+FKTPLRKL+I++ D +KRGRGPVVVKTIG TV +VL+SS+
Sbjct: 1   MIHLLYTVIFAEMALILLLLFKTPLRKLIILTFDRIKRGRGPVVVKTIGTTVFVVLLSSI 60

Query: 418 YSLIKIQKRXXXXXXXXXXSTDQVLFSKNLLEASLMGFSLFLALMIDRQHHYIRELRMLR 239
           YSL+ IQ+R           TDQVL SK+LLEASLMGF LFL+LMIDR HHYIRELR+LR
Sbjct: 61  YSLVNIQRR--SEDGAVLNPTDQVLASKHLLEASLMGFVLFLSLMIDRLHHYIRELRLLR 118

Query: 238 KNMEDVKKENRAVED*ELT 182
           K ME  KK+NR  ED + T
Sbjct: 119 KTMETAKKQNRGFEDGKTT 137


>ref|XP_002863762.1| hypothetical protein ARALYDRAFT_494776 [Arabidopsis lyrata subsp.
           lyrata] gi|297309597|gb|EFH40021.1| hypothetical protein
           ARALYDRAFT_494776 [Arabidopsis lyrata subsp. lyrata]
          Length = 218

 Score =  169 bits (429), Expect = 3e-40
 Identities = 90/135 (66%), Positives = 107/135 (79%)
 Frame = -2

Query: 598 MIQLLFSVIGFEIGLIMILMFKTPLRKLVIMSLDNVKRGRGPVVVKTIGGTVCIVLMSSV 419
           MI LL++VI  E+ LI++L+FKTPLRKL+I++ D +KRGRGPVVVKTIG TV IVL+SS+
Sbjct: 1   MIHLLYTVIFAEMALILLLLFKTPLRKLIILTFDRIKRGRGPVVVKTIGITVFIVLLSSI 60

Query: 418 YSLIKIQKRXXXXXXXXXXSTDQVLFSKNLLEASLMGFSLFLALMIDRQHHYIRELRMLR 239
           YSL+KIQ+R           TDQVL SK LLEASLMGF LFL+LMIDR HHYIRELR+LR
Sbjct: 61  YSLVKIQRR--SEDGAVLNPTDQVLASKYLLEASLMGFVLFLSLMIDRLHHYIRELRLLR 118

Query: 238 KNMEDVKKENRAVED 194
           K ME  KK+NR  ED
Sbjct: 119 KTMETAKKQNRGFED 133


>ref|NP_568607.1| B-cell receptor-associated 31-like protein [Arabidopsis thaliana]
           gi|15450826|gb|AAK96684.1| Unknown protein [Arabidopsis
           thaliana] gi|88196723|gb|ABD43004.1| At5g42570
           [Arabidopsis thaliana] gi|332007447|gb|AED94830.1|
           B-cell receptor-associated 31-like protein [Arabidopsis
           thaliana]
          Length = 218

 Score =  169 bits (429), Expect = 3e-40
 Identities = 89/139 (64%), Positives = 109/139 (78%)
 Frame = -2

Query: 598 MIQLLFSVIGFEIGLIMILMFKTPLRKLVIMSLDNVKRGRGPVVVKTIGGTVCIVLMSSV 419
           MI LL++VI  E+ LI++L+FKTPLRKL+I++ D +KRGRGPVVVKTIG TV +VL+SS+
Sbjct: 1   MIHLLYTVIFAEMALILLLLFKTPLRKLIILTFDRIKRGRGPVVVKTIGTTVFVVLLSSI 60

Query: 418 YSLIKIQKRXXXXXXXXXXSTDQVLFSKNLLEASLMGFSLFLALMIDRQHHYIRELRMLR 239
           YSL+ IQ+R           TDQVL SK+LLEASLMGF LFL+LMIDR HHYIRELR+LR
Sbjct: 61  YSLVNIQRR--SEDGAVLNPTDQVLASKHLLEASLMGFVLFLSLMIDRLHHYIRELRLLR 118

Query: 238 KNMEDVKKENRAVED*ELT 182
           K ME  KK+NR  ED + T
Sbjct: 119 KTMETAKKQNRGFEDGKTT 137


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