BLASTX nr result

ID: Coptis21_contig00011034 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011034
         (677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518207.1| transporter, putative [Ricinus communis] gi|...   155   7e-36
ref|XP_002315595.1| predicted protein [Populus trichocarpa] gi|2...   149   6e-34
ref|XP_002282484.1| PREDICTED: uncharacterized protein LOC100249...   148   8e-34
emb|CAN69681.1| hypothetical protein VITISV_003774 [Vitis vinifera]   148   1e-33
ref|XP_003598209.1| hypothetical protein MTR_3g008470 [Medicago ...   147   2e-33

>ref|XP_002518207.1| transporter, putative [Ricinus communis]
           gi|223542803|gb|EEF44340.1| transporter, putative
           [Ricinus communis]
          Length = 552

 Score =  155 bits (392), Expect = 7e-36
 Identities = 83/138 (60%), Positives = 97/138 (70%)
 Frame = -2

Query: 415 SCHHQNPRLSSPSQNTTNKPIINPKTNLLTPIILTPNQVPLXXXXXXXXXXKSRHFSQKG 236
           S H+QNP       NT NK +  P T+L   I  +P               + R F Q G
Sbjct: 41  SFHNQNP-------NTINK-LAKPGTHLYGVITQSP-VFSKKDNNTCRGYEEKRGFVQVG 91

Query: 235 SQQMLLLCGFGYWVQGFRCFPWLALNFHMANNLSLHPSILQLVQNSANLPMVAKPLYGVL 56
           SQQM +L GFGYWVQGFRCFPWLALNFHMA++L+LHPS+LQLVQ+S NLPMVAKPLYG+L
Sbjct: 92  SQQMAVLSGFGYWVQGFRCFPWLALNFHMAHHLNLHPSLLQLVQHSGNLPMVAKPLYGIL 151

Query: 55  SDALYIGGAHRIPYISIG 2
           +DA+YIGGAHRIPYI IG
Sbjct: 152 TDAVYIGGAHRIPYILIG 169


>ref|XP_002315595.1| predicted protein [Populus trichocarpa] gi|222864635|gb|EEF01766.1|
           predicted protein [Populus trichocarpa]
          Length = 470

 Score =  149 bits (375), Expect = 6e-34
 Identities = 67/85 (78%), Positives = 73/85 (85%)
 Frame = -2

Query: 256 RHFSQKGSQQMLLLCGFGYWVQGFRCFPWLALNFHMANNLSLHPSILQLVQNSANLPMVA 77
           R F   GSQQML LCGFGYW+QGFRCFPWLALNFHMA+NL+LH S LQL+QN  N PMVA
Sbjct: 5   RGFGHLGSQQMLALCGFGYWMQGFRCFPWLALNFHMAHNLNLHSSTLQLLQNCGNFPMVA 64

Query: 76  KPLYGVLSDALYIGGAHRIPYISIG 2
           KPLYG+LSDALY GGAHRIPYI +G
Sbjct: 65  KPLYGILSDALYTGGAHRIPYILVG 89


>ref|XP_002282484.1| PREDICTED: uncharacterized protein LOC100249433 [Vitis vinifera]
          Length = 551

 Score =  148 bits (374), Expect = 8e-34
 Identities = 87/176 (49%), Positives = 103/176 (58%), Gaps = 2/176 (1%)
 Frame = -2

Query: 523 IKTRPITKPFLPTTQKKHKRRDPIIKPSFLKFNLIY-SCHHQNPRLSSPSQNTTNKPIIN 347
           I  R    P  P+  K      P  KPS  +   ++ S H QNP     S   T      
Sbjct: 6   ISVRAPLNPITPSVLK------PPPKPSLFRVKPVHCSNHRQNPNAVDKSVKLT------ 53

Query: 346 PKTNLLTPIILTPNQVPLXXXXXXXXXXKSRHFS-QKGSQQMLLLCGFGYWVQGFRCFPW 170
             T+L+ PI +    V            + R  S Q GS+QML LCGFGY VQGFRCFPW
Sbjct: 54  --THLIHPITVATELVNKKHGKKNSGDEERRESSSQVGSRQMLGLCGFGYGVQGFRCFPW 111

Query: 169 LALNFHMANNLSLHPSILQLVQNSANLPMVAKPLYGVLSDALYIGGAHRIPYISIG 2
           LALNFHMA+NL L PS++Q+VQN  NLPMVAKPL+G+LSDA YIGGAHRIPYI +G
Sbjct: 112 LALNFHMAHNLRLDPSMMQIVQNIGNLPMVAKPLFGILSDAFYIGGAHRIPYIFLG 167


>emb|CAN69681.1| hypothetical protein VITISV_003774 [Vitis vinifera]
          Length = 534

 Score =  148 bits (373), Expect = 1e-33
 Identities = 87/176 (49%), Positives = 103/176 (58%), Gaps = 2/176 (1%)
 Frame = -2

Query: 523 IKTRPITKPFLPTTQKKHKRRDPIIKPSFLKFNLIY-SCHHQNPRLSSPSQNTTNKPIIN 347
           I  R    P  P+  K      P  KPS  +   ++ S HHQNP     S   T      
Sbjct: 6   ISVRAPLNPITPSVLK------PPPKPSLFRVKPVHCSNHHQNPNAVDKSVKLT------ 53

Query: 346 PKTNLLTPIILTPNQVPLXXXXXXXXXXKSRHFS-QKGSQQMLLLCGFGYWVQGFRCFPW 170
             T+L+  I +    V            + R  S Q GS+QML LCGFGY VQGFRCFPW
Sbjct: 54  --THLIHHITVATELVNKKHGKKNSGDEERRESSFQVGSRQMLGLCGFGYGVQGFRCFPW 111

Query: 169 LALNFHMANNLSLHPSILQLVQNSANLPMVAKPLYGVLSDALYIGGAHRIPYISIG 2
           LALNFHMA+NL L PS++Q+VQN  NLPMVAKPL+G+LSDA YIGGAHRIPYI +G
Sbjct: 112 LALNFHMAHNLRLDPSMMQIVQNIGNLPMVAKPLFGILSDAFYIGGAHRIPYIFLG 167


>ref|XP_003598209.1| hypothetical protein MTR_3g008470 [Medicago truncatula]
           gi|355487257|gb|AES68460.1| hypothetical protein
           MTR_3g008470 [Medicago truncatula]
          Length = 559

 Score =  147 bits (370), Expect = 2e-33
 Identities = 66/79 (83%), Positives = 73/79 (92%)
 Frame = -2

Query: 238 GSQQMLLLCGFGYWVQGFRCFPWLALNFHMANNLSLHPSILQLVQNSANLPMVAKPLYGV 59
           G +QML+LCGFGYW+QGFRCFPWLALNFHMA+NL+L PSILQLVQ SANLPMVAKPLYG+
Sbjct: 97  GGKQMLILCGFGYWLQGFRCFPWLALNFHMASNLNLDPSILQLVQYSANLPMVAKPLYGI 156

Query: 58  LSDALYIGGAHRIPYISIG 2
           LSD +YIGGAHRIPYI  G
Sbjct: 157 LSDVIYIGGAHRIPYIITG 175


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