BLASTX nr result

ID: Coptis21_contig00011017 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011017
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271141.1| PREDICTED: transcription factor bHLH120 [Vit...   163   4e-38
ref|XP_002321864.1| predicted protein [Populus trichocarpa] gi|2...   159   8e-37
ref|XP_002318856.1| predicted protein [Populus trichocarpa] gi|2...   154   2e-35
emb|CAN70067.1| hypothetical protein VITISV_015040 [Vitis vinifera]   147   3e-33
ref|XP_002299575.1| predicted protein [Populus trichocarpa] gi|2...   142   6e-32

>ref|XP_002271141.1| PREDICTED: transcription factor bHLH120 [Vitis vinifera]
           gi|296084088|emb|CBI24476.3| unnamed protein product
           [Vitis vinifera]
          Length = 247

 Score =  163 bits (412), Expect = 4e-38
 Identities = 101/216 (46%), Positives = 132/216 (61%)
 Frame = +3

Query: 6   VQQKMLLADASSGCCNAIKVDKLQLNLRRKLCATTNTISEGSSDTNSNKKKRMKMHREVE 185
           +QQ M+L  AS    N         N  RKL A  N   E S+D    KKK+  +HR+VE
Sbjct: 24  IQQDMILDHASLEASNLSNHKGKSPN--RKLFAQDNN-DEISND--GKKKKKKIVHRDVE 78

Query: 186 RQRRQEMATLYSTLRSLVPQEYLKGKRSISDHMNEAAHYIKHQQKKIKELVEKRDDLQRL 365
           RQRRQ+MATLY++LRSL+P EY+KGKR+IS+HMN A +YIKH QKKIKEL EKR++L+ L
Sbjct: 79  RQRRQDMATLYTSLRSLLPLEYIKGKRAISEHMNGAVNYIKHLQKKIKELGEKRNELKSL 138

Query: 366 XXXXXXXXXXXXXXXQNYVTVHACFSGVEIIVRNGPSDQVLPLSTVLGVLVEEGLSAISC 545
                           N+VTV  C+ GVEI+V +G   + +PLS  L  L+EEGLS ISC
Sbjct: 139 ANSSSRNSSG------NFVTVCPCWGGVEIVVSSGGEKEGMPLSRALETLLEEGLSVISC 192

Query: 546 TSTGVNENTFYAIQSEINNPKDFDLPSLRSKLINLV 653
            ST VN    + I  E+++    DL  L+ +L + V
Sbjct: 193 ISTKVNGRLLHTIHCEVSDITSIDLHGLQQQLSDQV 228


>ref|XP_002321864.1| predicted protein [Populus trichocarpa] gi|222868860|gb|EEF05991.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score =  159 bits (401), Expect = 8e-37
 Identities = 89/199 (44%), Positives = 128/199 (64%), Gaps = 2/199 (1%)
 Frame = +3

Query: 66  DKLQLNLRRKLCATTNTISEGSSDTNSNKKKRMKMHREVERQRRQEMATLYSTLRSLVPQ 245
           + ++   RR + +  N  +E + D N+N KK+M MHR++ERQRRQEM TLY++LR+L+P 
Sbjct: 44  NNMEKGRRRNIISMDN--NEAARDNNNNSKKKM-MHRDIERQRRQEMTTLYASLRALLPL 100

Query: 246 EYLKGKRSISDHMNEAAHYIKHQQKKIKELVEKRDDLQRL--XXXXXXXXXXXXXXXQNY 419
           E++KGKRSISDHMNEA +YIK+ QKKIKE   KRD+L++L                  + 
Sbjct: 101 EFIKGKRSISDHMNEAVNYIKYLQKKIKETSAKRDELKKLSDFSSVASPSGCSNKSSSSS 160

Query: 420 VTVHACFSGVEIIVRNGPSDQVLPLSTVLGVLVEEGLSAISCTSTGVNENTFYAIQSEIN 599
           V +     G+EI   +    + LPLS VL VL+EEG+S I+C ST VNE  F+++Q+E+N
Sbjct: 161 VALQPYPGGIEITFDSDLMGRDLPLSRVLQVLLEEGISVINCVSTKVNERLFHSVQTEVN 220

Query: 600 NPKDFDLPSLRSKLINLVN 656
           +P   +L  L  KL  +V+
Sbjct: 221 DPTCLNLSELWQKLTLVVS 239


>ref|XP_002318856.1| predicted protein [Populus trichocarpa] gi|222859529|gb|EEE97076.1|
           predicted protein [Populus trichocarpa]
          Length = 240

 Score =  154 bits (389), Expect = 2e-35
 Identities = 85/189 (44%), Positives = 120/189 (63%), Gaps = 2/189 (1%)
 Frame = +3

Query: 81  NLRRKLCATTNTISEGSSDTNSNKKKRMKMHREVERQRRQEMATLYSTLRSLVPQEYLKG 260
           N RR+   + ++  E + D + N  K+M MHR +ERQRRQEM TLY++LR+L+P E++KG
Sbjct: 47  NDRRRFLISMDSNHEVARDHSKNNNKKM-MHRNIERQRRQEMTTLYASLRALLPLEFIKG 105

Query: 261 KRSISDHMNEAAHYIKHQQKKIKELVEKRDDLQRLXXXXXXXXXXXXXXXQ--NYVTVHA 434
           KRSISDHMNE+ +YIK+ QKKIKEL  KRD L++                   + VT+  
Sbjct: 106 KRSISDHMNESVNYIKYLQKKIKELSAKRDGLKKSPNLSFDSPSGSSNKYSPISPVTLQP 165

Query: 435 CFSGVEIIVRNGPSDQVLPLSTVLGVLVEEGLSAISCTSTGVNENTFYAIQSEINNPKDF 614
              G+E++  +    Q  PLS VL VL+EEG+S ++C ST VNE  F+ +Q+E+N+P   
Sbjct: 166 YPGGIEVVFDSDFRGQDSPLSRVLQVLLEEGISVVNCVSTKVNERLFHTVQTEVNDPACL 225

Query: 615 DLPSLRSKL 641
           +L  LR KL
Sbjct: 226 NLSELRQKL 234


>emb|CAN70067.1| hypothetical protein VITISV_015040 [Vitis vinifera]
          Length = 208

 Score =  147 bits (370), Expect = 3e-33
 Identities = 88/180 (48%), Positives = 113/180 (62%)
 Frame = +3

Query: 90  RKLCATTNTISEGSSDTNSNKKKRMKMHREVERQRRQEMATLYSTLRSLVPQEYLKGKRS 269
           RKL A  N   E S+D    KKK+  +HR+VERQRRQ+MATLY++LRSL+P EY+KGKR+
Sbjct: 23  RKLFAQDNN-DEISND--GKKKKKKIVHRDVERQRRQDMATLYTSLRSLLPLEYIKGKRA 79

Query: 270 ISDHMNEAAHYIKHQQKKIKELVEKRDDLQRLXXXXXXXXXXXXXXXQNYVTVHACFSGV 449
           IS+HMN A +YIKH QKKIKEL EKR++L+ L                N+VTV  C+ GV
Sbjct: 80  ISEHMNGAVNYIKHLQKKIKELGEKRNELKSLANSSSRNSSG------NFVTVCPCWGGV 133

Query: 450 EIIVRNGPSDQVLPLSTVLGVLVEEGLSAISCTSTGVNENTFYAIQSEINNPKDFDLPSL 629
           EI++ +G   + +PLS  L  L+EEGLS  SC ST V + T   +        D  LP L
Sbjct: 134 EIVLSSGGEKEGMPLSRALETLLEEGLSVXSCISTKVXDITSIDLHGLQQQLSDQXLPHL 193


>ref|XP_002299575.1| predicted protein [Populus trichocarpa] gi|222846833|gb|EEE84380.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score =  142 bits (359), Expect = 6e-32
 Identities = 79/196 (40%), Positives = 122/196 (62%)
 Frame = +3

Query: 66  DKLQLNLRRKLCATTNTISEGSSDTNSNKKKRMKMHREVERQRRQEMATLYSTLRSLVPQ 245
           +K Q   RRK      ++ +   + N NKKK++ +HR++ERQRRQEMA LY +LR L+P 
Sbjct: 50  NKTQHGRRRKSPIALGSVKD--ENPNDNKKKKI-IHRDIERQRRQEMANLYGSLRCLLPL 106

Query: 246 EYLKGKRSISDHMNEAAHYIKHQQKKIKELVEKRDDLQRLXXXXXXXXXXXXXXXQNYVT 425
           +YLKGKRS SDH+++  +YIKHQ++KI++L++K+D+L+R                ++ +T
Sbjct: 107 KYLKGKRSTSDHIHQTVYYIKHQEEKIQKLIDKKDELKR-YLSTSSALENLEGCERDTLT 165

Query: 426 VHACFSGVEIIVRNGPSDQVLPLSTVLGVLVEEGLSAISCTSTGVNENTFYAIQSEINNP 605
           V     GVE+ + N    +  PLS VL +L+EEG S +SC ST VNE   + I SE+ + 
Sbjct: 166 VRTRCVGVEVDI-NTALKKGFPLSRVLAILIEEGFSVVSCISTKVNERMLHNIISEVTDG 224

Query: 606 KDFDLPSLRSKLINLV 653
           +  D+  L+ KL + +
Sbjct: 225 RSLDISELQQKLTSAI 240


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