BLASTX nr result

ID: Coptis21_contig00011006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00011006
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271141.1| PREDICTED: transcription factor bHLH120 [Vit...   132   4e-29
emb|CAN70067.1| hypothetical protein VITISV_015040 [Vitis vinifera]   129   2e-28
ref|XP_002321864.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
ref|XP_002318856.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23
ref|XP_002299575.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22

>ref|XP_002271141.1| PREDICTED: transcription factor bHLH120 [Vitis vinifera]
           gi|296084088|emb|CBI24476.3| unnamed protein product
           [Vitis vinifera]
          Length = 247

 Score =  132 bits (331), Expect = 4e-29
 Identities = 86/175 (49%), Positives = 105/175 (60%)
 Frame = -3

Query: 527 VQQKMLLADASSGCCNPIKVDKLQLRHRRKLCATTNTVSEGSSDTNSNKKKKMKMHREVE 348
           +QQ M+L  AS    N    +       RKL A  N   E S+D    KKKK  +HR+VE
Sbjct: 24  IQQDMILDHASLEASN--LSNHKGKSPNRKLFAQDNN-DEISND--GKKKKKKIVHRDVE 78

Query: 347 RQRRQDMATLYSTLWSLVPQEYLKGKRSISDHMNEAANYIKHQQKKIKELVEERDDLKRL 168
           RQRRQDMATLY++L SL+P EY+KGKR+IS+HMN A NYIKH QKKIKEL E+R++LK L
Sbjct: 79  RQRRQDMATLYTSLRSLLPLEYIKGKRAISEHMNGAVNYIKHLQKKIKELGEKRNELKSL 138

Query: 167 XXXXXXXXXXXXXXXXNYITVHACCSGVEVTVRSGPSDRVLPLSMVLGALAEEGL 3
                           N++TV  C  GVE+ V SG     +PLS  L  L EEGL
Sbjct: 139 ------ANSSSRNSSGNFVTVCPCWGGVEIVVSSGGEKEGMPLSRALETLLEEGL 187


>emb|CAN70067.1| hypothetical protein VITISV_015040 [Vitis vinifera]
          Length = 208

 Score =  129 bits (325), Expect = 2e-28
 Identities = 78/147 (53%), Positives = 95/147 (64%)
 Frame = -3

Query: 443 RKLCATTNTVSEGSSDTNSNKKKKMKMHREVERQRRQDMATLYSTLWSLVPQEYLKGKRS 264
           RKL A  N   E S+D    KKKK  +HR+VERQRRQDMATLY++L SL+P EY+KGKR+
Sbjct: 23  RKLFAQDNN-DEISND--GKKKKKKIVHRDVERQRRQDMATLYTSLRSLLPLEYIKGKRA 79

Query: 263 ISDHMNEAANYIKHQQKKIKELVEERDDLKRLXXXXXXXXXXXXXXXXNYITVHACCSGV 84
           IS+HMN A NYIKH QKKIKEL E+R++LK L                N++TV  C  GV
Sbjct: 80  ISEHMNGAVNYIKHLQKKIKELGEKRNELKSL------ANSSSRNSSGNFVTVCPCWGGV 133

Query: 83  EVTVRSGPSDRVLPLSMVLGALAEEGL 3
           E+ + SG     +PLS  L  L EEGL
Sbjct: 134 EIVLSSGGEKEGMPLSRALETLLEEGL 160


>ref|XP_002321864.1| predicted protein [Populus trichocarpa] gi|222868860|gb|EEF05991.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score =  124 bits (310), Expect = 1e-26
 Identities = 71/157 (45%), Positives = 98/157 (62%), Gaps = 2/157 (1%)
 Frame = -3

Query: 467 DKLQLRHRRKLCATTNTVSEGSSDTNSNKKKKMKMHREVERQRRQDMATLYSTLWSLVPQ 288
           + ++   RR + +  N  +E + D N+N KKKM MHR++ERQRRQ+M TLY++L +L+P 
Sbjct: 44  NNMEKGRRRNIISMDN--NEAARDNNNNSKKKM-MHRDIERQRRQEMTTLYASLRALLPL 100

Query: 287 EYLKGKRSISDHMNEAANYIKHQQKKIKELVEERDDLKRL--XXXXXXXXXXXXXXXXNY 114
           E++KGKRSISDHMNEA NYIK+ QKKIKE   +RD+LK+L                  + 
Sbjct: 101 EFIKGKRSISDHMNEAVNYIKYLQKKIKETSAKRDELKKLSDFSSVASPSGCSNKSSSSS 160

Query: 113 ITVHACCSGVEVTVRSGPSDRVLPLSMVLGALAEEGL 3
           + +     G+E+T  S    R LPLS VL  L EEG+
Sbjct: 161 VALQPYPGGIEITFDSDLMGRDLPLSRVLQVLLEEGI 197


>ref|XP_002318856.1| predicted protein [Populus trichocarpa] gi|222859529|gb|EEE97076.1|
           predicted protein [Populus trichocarpa]
          Length = 240

 Score =  112 bits (279), Expect = 4e-23
 Identities = 66/150 (44%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
 Frame = -3

Query: 446 RRKLCATTNTVSEGSSDTNSNKKKKMKMHREVERQRRQDMATLYSTLWSLVPQEYLKGKR 267
           RR+   + ++  E + D + N  KKM MHR +ERQRRQ+M TLY++L +L+P E++KGKR
Sbjct: 49  RRRFLISMDSNHEVARDHSKNNNKKM-MHRNIERQRRQEMTTLYASLRALLPLEFIKGKR 107

Query: 266 SISDHMNEAANYIKHQQKKIKELVEERDDLKRLXXXXXXXXXXXXXXXXNY--ITVHACC 93
           SISDHMNE+ NYIK+ QKKIKEL  +RD LK+                     +T+    
Sbjct: 108 SISDHMNESVNYIKYLQKKIKELSAKRDGLKKSPNLSFDSPSGSSNKYSPISPVTLQPYP 167

Query: 92  SGVEVTVRSGPSDRVLPLSMVLGALAEEGL 3
            G+EV   S    +  PLS VL  L EEG+
Sbjct: 168 GGIEVVFDSDFRGQDSPLSRVLQVLLEEGI 197


>ref|XP_002299575.1| predicted protein [Populus trichocarpa] gi|222846833|gb|EEE84380.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score =  110 bits (274), Expect = 2e-22
 Identities = 65/154 (42%), Positives = 93/154 (60%)
 Frame = -3

Query: 467 DKLQLRHRRKLCATTNTVSEGSSDTNSNKKKKMKMHREVERQRRQDMATLYSTLWSLVPQ 288
           +K Q   RRK      +V +   + N NKKKK+ +HR++ERQRRQ+MA LY +L  L+P 
Sbjct: 50  NKTQHGRRRKSPIALGSVKD--ENPNDNKKKKI-IHRDIERQRRQEMANLYGSLRCLLPL 106

Query: 287 EYLKGKRSISDHMNEAANYIKHQQKKIKELVEERDDLKRLXXXXXXXXXXXXXXXXNYIT 108
           +YLKGKRS SDH+++   YIKHQ++KI++L++++D+LKR                   +T
Sbjct: 107 KYLKGKRSTSDHIHQTVYYIKHQEEKIQKLIDKKDELKRYLSTSSALENLEGCERDT-LT 165

Query: 107 VHACCSGVEVTVRSGPSDRVLPLSMVLGALAEEG 6
           V   C GVEV + +    +  PLS VL  L EEG
Sbjct: 166 VRTRCVGVEVDINTA-LKKGFPLSRVLAILIEEG 198


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