BLASTX nr result
ID: Coptis21_contig00010993
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00010993 (1484 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2... 125 3e-26 ref|XP_003588676.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 113 1e-22 ref|XP_003589011.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 102 3e-19 ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2... 99 2e-18 ref|XP_003588677.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 98 6e-18 >ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1| predicted protein [Populus trichocarpa] Length = 460 Score = 125 bits (314), Expect = 3e-26 Identities = 130/441 (29%), Positives = 209/441 (47%), Gaps = 23/441 (5%) Frame = -3 Query: 1392 AIKTSSLSKKWLNVCTSLTNIEFDQVKFERWSRGKRQFKDFVNQTLVLHGGLDIDKFSIY 1213 A++TS LSKKWL++ S TN+ F +K S ++ F DFV++ L L G +I +F + Sbjct: 48 AVRTSILSKKWLHLWKSTTNLTFFGLK----SPKRKLFMDFVDRVLALRGPSNIVQFYLS 103 Query: 1212 IDIGGISMSNVNSWIYFAVNHNVKEV--DIAGYYGYFEKLPCCLFTCGTLSVLTLE--YV 1045 ++ S V +WI AVN NVK++ ++ + F LP CLF C TL+ L + Y+ Sbjct: 104 CEVKD-DPSRVGTWISAAVNRNVKDLYLELRDFEASFV-LPHCLFNCETLTELEINMPYI 161 Query: 1044 KLELPTVVGLPKLKYLKIKFGRFFDENSTAQLFSSCPLLEELVISNCCFEDMNVNCIVEI 865 L+LP+ + L LK L + F D++ST QLFS P L EL I C + ++ V I Sbjct: 162 -LKLPSSISLSCLKILNLYEVIFTDDHSTQQLFS-LPNLVELEIHECNWMNL---VAVSI 216 Query: 864 SSPSLKSLTVLHDRLVKSFYLPPVKISTSNL--CNIRYYGN-----------PPEICLET 724 S+P L+SL + H+ P + S ++L C++R +G + CL Sbjct: 217 SAPKLQSLDI-HE---------PCQSSPASLGGCHVRIFGTHLADFTIIGTLSNDYCLYE 266 Query: 723 LSSLSNVDFEFTS---PLVT--RARAILMGLQNVVRMVLRGFFIELLSRNEGSLACLPTS 559 S + F++ P T RA +L G+ + + L +++L + L P Sbjct: 267 SSVVETCISIFSAADKPRQTAYRASKLLEGISSAQSLCLTTNVVDVLD-DAPELLAFPLE 325 Query: 558 CFSLEYLQLDVKPSKEQVQVVILLLRNYPNLKHLRI-SVKEPTRRLNXXXXXXXXXXXXX 382 +L L + + S ++ N P+L L+ V P N Sbjct: 326 FRNLTSLLFESEESNLHSDGFWHIIYNSPHLIALQFYGVSMPKVPSNCREDWTLDP---- 381 Query: 381 XXGSSMDILYHLKTVDIESFGGSKIELNLVRYLLKNANIVEKLNIIYSGKNGKKDDVSRR 202 S L LK + + FGG + EL+ V +LLKNA +E ++IIYSG + V + Sbjct: 382 ---SPPCFLSCLKFIQVGRFGGDEKELDAVGFLLKNATALESMDIIYSGSARRDQGVDKT 438 Query: 201 LRINEEISSFTKASLSAEISF 139 I++++ + + S I+F Sbjct: 439 NEIHQQLLALPRWSEIGNINF 459 >ref|XP_003588676.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] gi|355477724|gb|AES58927.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] Length = 428 Score = 113 bits (282), Expect = 1e-22 Identities = 111/432 (25%), Positives = 196/432 (45%), Gaps = 13/432 (3%) Frame = -3 Query: 1395 DAIKTSSLSKKWLNVCTSLTNIEFDQVKFERWSRGKRQFKDF-------VNQTLVLHGGL 1237 +A++TS LS KW ++ N+ FD+ S+ F D ++Q L+L+ G Sbjct: 28 EAVRTSVLSNKWRYKWATIPNLVFDKQCVSATSKCSELFLDMEGKLMEIIDQVLLLYSG- 86 Query: 1236 DIDKFSIY-IDIGGISMSNVNSWIYFAVNHNVKEVDIAGYYGYFEKLPCCLFTCGTLSVL 1060 I+KF I + IS + ++ WI+ ++KE+ + K+P CLF+C +L L Sbjct: 87 PINKFQISRCGVNLISETALDRWIFHLTKRSIKELVLQISERKLYKIPWCLFSCQSLHHL 146 Query: 1059 TLEYVKLELP-TVVGLPKLKYLK---IKFGRFFDENSTAQLFSSCPLLEELVISNCCFED 892 TL Y L+ P T+ GL LK L + ++ EN L SSCPLLE L ++ + Sbjct: 147 TLYYCLLKPPSTIEGLKNLKSLDLDHVSMSQYAFEN----LISSCPLLENLTLT-----E 197 Query: 891 MNVNCIVEISSPSLKSLTVLHDRLVKSFYLPPVKISTSNLCNIRYYGNPPEICLETLSSL 712 ++ + I +P+LK L + IS N + Y + L + S+ Sbjct: 198 LDGFTQINIHAPNLKVLDICGKF---------EDISFDNTFQLDYVFVDLSLYLNSESNQ 248 Query: 711 SNVDFEFTSPLVTRARAILMGLQNVVRMVLRGFFIELLSRNEGSLACLPTSCFSLEYLQL 532 S + ++ L A L ++ +V+ G+F++ L+ + LPT C +L YL Sbjct: 249 SRLHGSPSNLLNFFAH-----LHHIHGLVINGYFLKYLAAGAVPVK-LPTPCINLTYLWF 302 Query: 531 DVK-PSKEQVQVVILLLRNYPNLKHLRISVKEPTRRLNXXXXXXXXXXXXXXXGSSMDIL 355 + +++ + + R+ PNLK L I K + + +L Sbjct: 303 SINFYDFKEISTALCVFRSSPNLKELNIFAKHEKKTI----VLAPAFFCWEDIFLEPSML 358 Query: 354 YHLKTVDIESFGGSKIELNLVRYLLKNANIVEKLNIIYSGKNGKKDDVSRRLRINEEISS 175 ++ V IE G K EL+ +R+LL ++ ++EK+ + K + + ++ E+ Sbjct: 359 TRVRHVGIEGISGIKSELDFMRFLLLHSPVLEKMRV--------KPNFNVGSKLMSELLR 410 Query: 174 FTKASLSAEISF 139 F +AS AE+ + Sbjct: 411 FKRASAQAEVVY 422 >ref|XP_003589011.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] gi|355478059|gb|AES59262.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] Length = 528 Score = 102 bits (254), Expect = 3e-19 Identities = 106/396 (26%), Positives = 187/396 (47%), Gaps = 15/396 (3%) Frame = -3 Query: 1395 DAIKTSSLSKKWLNVCTSLTNIEFDQ--VKFERWSRGK------RQFKDFVNQTLVLHGG 1240 DA++TS LS+ W +L N+ FD V + G +F V+ L++H G Sbjct: 36 DAVRTSVLSRNWRKKWYTLPNLVFDTKLVPVPAATSGDPLAIIDNKFLQIVDHVLLVHSG 95 Query: 1239 -LDIDKFSIYIDIGGIS--MSNVNSWIYFAVNHNVKEVDIAGYYGYFEKLPCCLFTCGTL 1069 +++ KFS D+ G ++N++ WI + ++KE+ + + + KLP CLF+C +L Sbjct: 96 PINMFKFSNVDDLMGEDSLVTNIDRWILHLIGRSIKELVLEVWIDDYYKLPWCLFSCQSL 155 Query: 1068 SVLTLEYVKLELPTVV-GLPKLKYLKIKFGRFFDENSTAQLFSSCPLLEELVISNCCFED 892 L L L+ PT+ G LK L + +++ S CPLLE+L + F Sbjct: 156 HSLKLNGCLLKPPTMFEGFRNLKSLDLCLVNIV-QDAFENFISRCPLLEKLRLRE--FYG 212 Query: 891 MNVNCIVEISSPSLKSLTVLHDRLVKSFYLPPVKISTSNLCNIRYYGNPPEICLETLSSL 712 + + I +P+LK ++ + V +F +T L I Y CLE L+S Sbjct: 213 LTQ---INIHAPNLKFFEIVGEFEVVTFG------NTFQLTTIVIYS-----CLE-LTSN 257 Query: 711 SNVDFEFTSP-LVTRARAILMGLQNVVRMVLRGFFIELLSRNEGSLACLPTSCFSLEYLQ 535 SN + SP + ++ + + GFF++ L+ + LPT C +L +L Sbjct: 258 SN---QSRSPGCSSNLLKFFDHRPHIQSLEIDGFFLKYLAAGVLPVK-LPTPCINLSFLS 313 Query: 534 LDVK-PSKEQVQVVILLLRNYPNLKHLRISVKEPTRRLNXXXXXXXXXXXXXXXGSSMDI 358 L + + E++ + + R+ PNL+ L+IS R + SS + Sbjct: 314 LTINFDNMEEISAALCVFRSSPNLQKLKIS----ALRAHVATVPLTPATYCWEDISSRLV 369 Query: 357 L-YHLKTVDIESFGGSKIELNLVRYLLKNANIVEKL 253 + + ++ V I+ G++ ELNL+R+LL + ++EK+ Sbjct: 370 MPFRVRHVTIDGISGTQSELNLIRFLLLYSLVLEKM 405 >ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1| predicted protein [Populus trichocarpa] Length = 420 Score = 99.4 bits (246), Expect = 2e-18 Identities = 93/306 (30%), Positives = 152/306 (49%), Gaps = 14/306 (4%) Frame = -3 Query: 1395 DAIKTSSLSKKWLNVCTSLTNIEFDQVKFERWSRGKRQ-FKDFVNQTLVLHGGLDIDKFS 1219 DA++TS LS+KW ++ SL+N+EF Q F + KR+ F + V + L+L +I+KF+ Sbjct: 59 DAVRTSILSRKWEHLWKSLSNLEFHQCYF----KAKRKIFMNSVERVLLLRDSSNIEKFT 114 Query: 1218 IYIDIGGISMSNVNSWIYFAVNHNVKEVDIAGYYGYFEK---LPCCLFTCGTLSVLTL-E 1051 + I + +W+ AVN NVKE+ + Y G + P CLFTC TL+ L + Sbjct: 115 LSCGID--DATRTRTWVSAAVNRNVKELCVNFYEGGESESFVSPLCLFTCATLTKLKITS 172 Query: 1050 YVKLELPTVVGLPKLKYLKIKFGRFFDENSTAQLFSSCPLLEELVISNCCFEDMNVNCIV 871 + L L + + LP LK L ++ F DE+ST Q+ + LE+L IS ++++ + Sbjct: 173 HGVLRLSSSISLPCLKILSLQHVVFPDEDSTQQIL-NLRTLEKLKISYYDWKNLKA---I 228 Query: 870 EISSPSLKSLTV--LHDRLVKSFYLPPVKISTSNLCNIRYYGN-PPEICLETLSSLSNVD 700 IS+P L+SL + +H ++ V I + L + G + CL SSL Sbjct: 229 TISAPKLRSLDICEMHRNDLRGSDACHVMIFGTALTFFSFSGGFWDDYCLFKSSSLVEAY 288 Query: 699 F------EFTSPLVTRARAILMGLQNVVRMVLRGFFIELLSRNEGSLACLPTSCFSLEYL 538 F E + + RA ++GL V + L +++ E LPT+C +++ Sbjct: 289 FHVYGCYERSREIAHRAYKHIVGLSTVKHLTLTPDVLKIELSEE-----LPTNCAKDDWI 343 Query: 537 QLDVKP 520 V P Sbjct: 344 LEPVPP 349 >ref|XP_003588677.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] gi|355477725|gb|AES58928.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] Length = 657 Score = 97.8 bits (242), Expect = 6e-18 Identities = 90/323 (27%), Positives = 156/323 (48%), Gaps = 6/323 (1%) Frame = -3 Query: 1395 DAIKTSSLSKKWLNVCTSLTNIEFDQ----VKFERWSRGKRQFKDFVNQTLVLHGGLDID 1228 D ++TS LS KW ++ N+ FD E + KR+ ++ L+L+ G I+ Sbjct: 344 DVVRTSILSNKWRYKWITIPNLVFDSQCVSATSEHPAAIKRKLLAIIDHVLLLYYG-PIN 402 Query: 1227 KFSIYIDIGGISMSNVNSWIYFAVNHNVKEVDIAGYYGYFEKLPCCLFTCGTLSVLTLEY 1048 KF + G IS + ++ WI+ ++KE+ + G K+P CLF+C +L LTL Sbjct: 403 KFKLS-PFGLISATALDRWIFHLTRRSIKELVLGLSIGQSYKIPWCLFSCQSLHYLTLFS 461 Query: 1047 VKLELPTVV-GLPKLKYLKIKFGRFFDENSTAQLFSSCPLLEELVISNCCFEDMNVNCIV 871 L+ P+++ GL LK L + +++ L SSCPLLE+L+++ F+ + Sbjct: 462 CLLKPPSMIEGLKNLKSLYL-VKVTISQDAFESLISSCPLLEKLMLAE--FDGFTQ---I 515 Query: 870 EISSPSLKSLTVLHDRLVKSFYLPPVKISTSNLCNIRYYGNPPEICLETLSSLSNVDFEF 691 I +P+L L + V F IS N + Y +CL + S+ S + Sbjct: 516 NIHAPNLNGLGI-----VGKF----EDISFENTYLLNYVIVDLSLCLNSESNHSRLQGSS 566 Query: 690 TSPLVTRARAILMGLQNVVRMVLRGFFIELLSRNEGSLACLPTSCFSLEYLQLDVK-PSK 514 ++ L A + ++ ++ +RG+F + L+ + LPT C +L YL L + Sbjct: 567 SNLLNFFAH-----IHHIYKLDIRGYFFKYLAAGVVPVK-LPTPCINLTYLWLSINFYDL 620 Query: 513 EQVQVVILLLRNYPNLKHLRISV 445 +++ + + R+ PNLK L I V Sbjct: 621 KEISTALCVFRSSPNLKELNIFV 643 Score = 72.8 bits (177), Expect = 2e-10 Identities = 81/325 (24%), Positives = 142/325 (43%), Gaps = 10/325 (3%) Frame = -3 Query: 1395 DAIKTSSLSKKWLNVCTSLTNIEFDQVKFERWSRG----KRQFKDFVNQTLVLHGGLDID 1228 D ++TS L KW T++ N+ FD+ S +R+ ++ L+L+ G I+ Sbjct: 28 DVVRTSVLCNKWRYKWTTIPNLVFDKQCVSATSHRPLVIERKLLAIIDHVLLLYSG-PIN 86 Query: 1227 KFSIYIDIGGISMSNVNSWIYFAVNHNVKEVDIAGYYGYFEKLPCCLFTCGTLSVLTLEY 1048 KF ++K++ I G K+P CLF+C +L L+L Y Sbjct: 87 KFK----------------------RSIKKLVIEISKGQPYKIPWCLFSCQSLLHLSLSY 124 Query: 1047 VKLELP-TVVGLPKLKYLKIKFGRFFDENSTAQLFSSCPLLEELVISNCCFEDMNVNCIV 871 L+ P T+VG LK L++ +++ L CPLLE+L+ F++ + Sbjct: 125 GLLKPPSTIVGFKNLKSLELDHFT-MSQDAFENLLFGCPLLEKLI-----FDEFEGFTKI 178 Query: 870 EISSPSLKSLTVLHD----RLVKSFYLPPVKISTSNLCNIRYYGNPPEICLETLSSLSNV 703 I++P+LKSL + + +F L V + S N N L+ + L +V Sbjct: 179 NINAPNLKSLGISGKFEDISFINTFKLTCVAVDLSLYLNSESSSN----LLDFFTQLHHV 234 Query: 702 DFEFTSPLVTRARAILMGLQNVVRMVLRGFFIELLSRNEGSLACLPTSCFSLEYLQLDVK 523 + S ++++ +VV L + L LPT C +L L L + Sbjct: 235 YELYVSGYFSKSKF------SVVHQYLAAGVVPLK---------LPTPCINLMSLWLSIN 279 Query: 522 PSK-EQVQVVILLLRNYPNLKHLRI 451 ++ +++ + + R+ PNLK L+I Sbjct: 280 FNELKEISTALSVFRSSPNLKELKI 304