BLASTX nr result
ID: Coptis21_contig00010993
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00010993
(1484 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2... 125 3e-26
ref|XP_003588676.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 113 1e-22
ref|XP_003589011.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 102 3e-19
ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2... 99 2e-18
ref|XP_003588677.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 98 6e-18
>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
predicted protein [Populus trichocarpa]
Length = 460
Score = 125 bits (314), Expect = 3e-26
Identities = 130/441 (29%), Positives = 209/441 (47%), Gaps = 23/441 (5%)
Frame = -3
Query: 1392 AIKTSSLSKKWLNVCTSLTNIEFDQVKFERWSRGKRQFKDFVNQTLVLHGGLDIDKFSIY 1213
A++TS LSKKWL++ S TN+ F +K S ++ F DFV++ L L G +I +F +
Sbjct: 48 AVRTSILSKKWLHLWKSTTNLTFFGLK----SPKRKLFMDFVDRVLALRGPSNIVQFYLS 103
Query: 1212 IDIGGISMSNVNSWIYFAVNHNVKEV--DIAGYYGYFEKLPCCLFTCGTLSVLTLE--YV 1045
++ S V +WI AVN NVK++ ++ + F LP CLF C TL+ L + Y+
Sbjct: 104 CEVKD-DPSRVGTWISAAVNRNVKDLYLELRDFEASFV-LPHCLFNCETLTELEINMPYI 161
Query: 1044 KLELPTVVGLPKLKYLKIKFGRFFDENSTAQLFSSCPLLEELVISNCCFEDMNVNCIVEI 865
L+LP+ + L LK L + F D++ST QLFS P L EL I C + ++ V I
Sbjct: 162 -LKLPSSISLSCLKILNLYEVIFTDDHSTQQLFS-LPNLVELEIHECNWMNL---VAVSI 216
Query: 864 SSPSLKSLTVLHDRLVKSFYLPPVKISTSNL--CNIRYYGN-----------PPEICLET 724
S+P L+SL + H+ P + S ++L C++R +G + CL
Sbjct: 217 SAPKLQSLDI-HE---------PCQSSPASLGGCHVRIFGTHLADFTIIGTLSNDYCLYE 266
Query: 723 LSSLSNVDFEFTS---PLVT--RARAILMGLQNVVRMVLRGFFIELLSRNEGSLACLPTS 559
S + F++ P T RA +L G+ + + L +++L + L P
Sbjct: 267 SSVVETCISIFSAADKPRQTAYRASKLLEGISSAQSLCLTTNVVDVLD-DAPELLAFPLE 325
Query: 558 CFSLEYLQLDVKPSKEQVQVVILLLRNYPNLKHLRI-SVKEPTRRLNXXXXXXXXXXXXX 382
+L L + + S ++ N P+L L+ V P N
Sbjct: 326 FRNLTSLLFESEESNLHSDGFWHIIYNSPHLIALQFYGVSMPKVPSNCREDWTLDP---- 381
Query: 381 XXGSSMDILYHLKTVDIESFGGSKIELNLVRYLLKNANIVEKLNIIYSGKNGKKDDVSRR 202
S L LK + + FGG + EL+ V +LLKNA +E ++IIYSG + V +
Sbjct: 382 ---SPPCFLSCLKFIQVGRFGGDEKELDAVGFLLKNATALESMDIIYSGSARRDQGVDKT 438
Query: 201 LRINEEISSFTKASLSAEISF 139
I++++ + + S I+F
Sbjct: 439 NEIHQQLLALPRWSEIGNINF 459
>ref|XP_003588676.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
gi|355477724|gb|AES58927.1| F-box/FBD/LRR-repeat protein
[Medicago truncatula]
Length = 428
Score = 113 bits (282), Expect = 1e-22
Identities = 111/432 (25%), Positives = 196/432 (45%), Gaps = 13/432 (3%)
Frame = -3
Query: 1395 DAIKTSSLSKKWLNVCTSLTNIEFDQVKFERWSRGKRQFKDF-------VNQTLVLHGGL 1237
+A++TS LS KW ++ N+ FD+ S+ F D ++Q L+L+ G
Sbjct: 28 EAVRTSVLSNKWRYKWATIPNLVFDKQCVSATSKCSELFLDMEGKLMEIIDQVLLLYSG- 86
Query: 1236 DIDKFSIY-IDIGGISMSNVNSWIYFAVNHNVKEVDIAGYYGYFEKLPCCLFTCGTLSVL 1060
I+KF I + IS + ++ WI+ ++KE+ + K+P CLF+C +L L
Sbjct: 87 PINKFQISRCGVNLISETALDRWIFHLTKRSIKELVLQISERKLYKIPWCLFSCQSLHHL 146
Query: 1059 TLEYVKLELP-TVVGLPKLKYLK---IKFGRFFDENSTAQLFSSCPLLEELVISNCCFED 892
TL Y L+ P T+ GL LK L + ++ EN L SSCPLLE L ++ +
Sbjct: 147 TLYYCLLKPPSTIEGLKNLKSLDLDHVSMSQYAFEN----LISSCPLLENLTLT-----E 197
Query: 891 MNVNCIVEISSPSLKSLTVLHDRLVKSFYLPPVKISTSNLCNIRYYGNPPEICLETLSSL 712
++ + I +P+LK L + IS N + Y + L + S+
Sbjct: 198 LDGFTQINIHAPNLKVLDICGKF---------EDISFDNTFQLDYVFVDLSLYLNSESNQ 248
Query: 711 SNVDFEFTSPLVTRARAILMGLQNVVRMVLRGFFIELLSRNEGSLACLPTSCFSLEYLQL 532
S + ++ L A L ++ +V+ G+F++ L+ + LPT C +L YL
Sbjct: 249 SRLHGSPSNLLNFFAH-----LHHIHGLVINGYFLKYLAAGAVPVK-LPTPCINLTYLWF 302
Query: 531 DVK-PSKEQVQVVILLLRNYPNLKHLRISVKEPTRRLNXXXXXXXXXXXXXXXGSSMDIL 355
+ +++ + + R+ PNLK L I K + + +L
Sbjct: 303 SINFYDFKEISTALCVFRSSPNLKELNIFAKHEKKTI----VLAPAFFCWEDIFLEPSML 358
Query: 354 YHLKTVDIESFGGSKIELNLVRYLLKNANIVEKLNIIYSGKNGKKDDVSRRLRINEEISS 175
++ V IE G K EL+ +R+LL ++ ++EK+ + K + + ++ E+
Sbjct: 359 TRVRHVGIEGISGIKSELDFMRFLLLHSPVLEKMRV--------KPNFNVGSKLMSELLR 410
Query: 174 FTKASLSAEISF 139
F +AS AE+ +
Sbjct: 411 FKRASAQAEVVY 422
>ref|XP_003589011.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
gi|355478059|gb|AES59262.1| F-box/FBD/LRR-repeat protein
[Medicago truncatula]
Length = 528
Score = 102 bits (254), Expect = 3e-19
Identities = 106/396 (26%), Positives = 187/396 (47%), Gaps = 15/396 (3%)
Frame = -3
Query: 1395 DAIKTSSLSKKWLNVCTSLTNIEFDQ--VKFERWSRGK------RQFKDFVNQTLVLHGG 1240
DA++TS LS+ W +L N+ FD V + G +F V+ L++H G
Sbjct: 36 DAVRTSVLSRNWRKKWYTLPNLVFDTKLVPVPAATSGDPLAIIDNKFLQIVDHVLLVHSG 95
Query: 1239 -LDIDKFSIYIDIGGIS--MSNVNSWIYFAVNHNVKEVDIAGYYGYFEKLPCCLFTCGTL 1069
+++ KFS D+ G ++N++ WI + ++KE+ + + + KLP CLF+C +L
Sbjct: 96 PINMFKFSNVDDLMGEDSLVTNIDRWILHLIGRSIKELVLEVWIDDYYKLPWCLFSCQSL 155
Query: 1068 SVLTLEYVKLELPTVV-GLPKLKYLKIKFGRFFDENSTAQLFSSCPLLEELVISNCCFED 892
L L L+ PT+ G LK L + +++ S CPLLE+L + F
Sbjct: 156 HSLKLNGCLLKPPTMFEGFRNLKSLDLCLVNIV-QDAFENFISRCPLLEKLRLRE--FYG 212
Query: 891 MNVNCIVEISSPSLKSLTVLHDRLVKSFYLPPVKISTSNLCNIRYYGNPPEICLETLSSL 712
+ + I +P+LK ++ + V +F +T L I Y CLE L+S
Sbjct: 213 LTQ---INIHAPNLKFFEIVGEFEVVTFG------NTFQLTTIVIYS-----CLE-LTSN 257
Query: 711 SNVDFEFTSP-LVTRARAILMGLQNVVRMVLRGFFIELLSRNEGSLACLPTSCFSLEYLQ 535
SN + SP + ++ + + GFF++ L+ + LPT C +L +L
Sbjct: 258 SN---QSRSPGCSSNLLKFFDHRPHIQSLEIDGFFLKYLAAGVLPVK-LPTPCINLSFLS 313
Query: 534 LDVK-PSKEQVQVVILLLRNYPNLKHLRISVKEPTRRLNXXXXXXXXXXXXXXXGSSMDI 358
L + + E++ + + R+ PNL+ L+IS R + SS +
Sbjct: 314 LTINFDNMEEISAALCVFRSSPNLQKLKIS----ALRAHVATVPLTPATYCWEDISSRLV 369
Query: 357 L-YHLKTVDIESFGGSKIELNLVRYLLKNANIVEKL 253
+ + ++ V I+ G++ ELNL+R+LL + ++EK+
Sbjct: 370 MPFRVRHVTIDGISGTQSELNLIRFLLLYSLVLEKM 405
>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
predicted protein [Populus trichocarpa]
Length = 420
Score = 99.4 bits (246), Expect = 2e-18
Identities = 93/306 (30%), Positives = 152/306 (49%), Gaps = 14/306 (4%)
Frame = -3
Query: 1395 DAIKTSSLSKKWLNVCTSLTNIEFDQVKFERWSRGKRQ-FKDFVNQTLVLHGGLDIDKFS 1219
DA++TS LS+KW ++ SL+N+EF Q F + KR+ F + V + L+L +I+KF+
Sbjct: 59 DAVRTSILSRKWEHLWKSLSNLEFHQCYF----KAKRKIFMNSVERVLLLRDSSNIEKFT 114
Query: 1218 IYIDIGGISMSNVNSWIYFAVNHNVKEVDIAGYYGYFEK---LPCCLFTCGTLSVLTL-E 1051
+ I + +W+ AVN NVKE+ + Y G + P CLFTC TL+ L +
Sbjct: 115 LSCGID--DATRTRTWVSAAVNRNVKELCVNFYEGGESESFVSPLCLFTCATLTKLKITS 172
Query: 1050 YVKLELPTVVGLPKLKYLKIKFGRFFDENSTAQLFSSCPLLEELVISNCCFEDMNVNCIV 871
+ L L + + LP LK L ++ F DE+ST Q+ + LE+L IS ++++ +
Sbjct: 173 HGVLRLSSSISLPCLKILSLQHVVFPDEDSTQQIL-NLRTLEKLKISYYDWKNLKA---I 228
Query: 870 EISSPSLKSLTV--LHDRLVKSFYLPPVKISTSNLCNIRYYGN-PPEICLETLSSLSNVD 700
IS+P L+SL + +H ++ V I + L + G + CL SSL
Sbjct: 229 TISAPKLRSLDICEMHRNDLRGSDACHVMIFGTALTFFSFSGGFWDDYCLFKSSSLVEAY 288
Query: 699 F------EFTSPLVTRARAILMGLQNVVRMVLRGFFIELLSRNEGSLACLPTSCFSLEYL 538
F E + + RA ++GL V + L +++ E LPT+C +++
Sbjct: 289 FHVYGCYERSREIAHRAYKHIVGLSTVKHLTLTPDVLKIELSEE-----LPTNCAKDDWI 343
Query: 537 QLDVKP 520
V P
Sbjct: 344 LEPVPP 349
>ref|XP_003588677.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
gi|355477725|gb|AES58928.1| F-box/FBD/LRR-repeat protein
[Medicago truncatula]
Length = 657
Score = 97.8 bits (242), Expect = 6e-18
Identities = 90/323 (27%), Positives = 156/323 (48%), Gaps = 6/323 (1%)
Frame = -3
Query: 1395 DAIKTSSLSKKWLNVCTSLTNIEFDQ----VKFERWSRGKRQFKDFVNQTLVLHGGLDID 1228
D ++TS LS KW ++ N+ FD E + KR+ ++ L+L+ G I+
Sbjct: 344 DVVRTSILSNKWRYKWITIPNLVFDSQCVSATSEHPAAIKRKLLAIIDHVLLLYYG-PIN 402
Query: 1227 KFSIYIDIGGISMSNVNSWIYFAVNHNVKEVDIAGYYGYFEKLPCCLFTCGTLSVLTLEY 1048
KF + G IS + ++ WI+ ++KE+ + G K+P CLF+C +L LTL
Sbjct: 403 KFKLS-PFGLISATALDRWIFHLTRRSIKELVLGLSIGQSYKIPWCLFSCQSLHYLTLFS 461
Query: 1047 VKLELPTVV-GLPKLKYLKIKFGRFFDENSTAQLFSSCPLLEELVISNCCFEDMNVNCIV 871
L+ P+++ GL LK L + +++ L SSCPLLE+L+++ F+ +
Sbjct: 462 CLLKPPSMIEGLKNLKSLYL-VKVTISQDAFESLISSCPLLEKLMLAE--FDGFTQ---I 515
Query: 870 EISSPSLKSLTVLHDRLVKSFYLPPVKISTSNLCNIRYYGNPPEICLETLSSLSNVDFEF 691
I +P+L L + V F IS N + Y +CL + S+ S +
Sbjct: 516 NIHAPNLNGLGI-----VGKF----EDISFENTYLLNYVIVDLSLCLNSESNHSRLQGSS 566
Query: 690 TSPLVTRARAILMGLQNVVRMVLRGFFIELLSRNEGSLACLPTSCFSLEYLQLDVK-PSK 514
++ L A + ++ ++ +RG+F + L+ + LPT C +L YL L +
Sbjct: 567 SNLLNFFAH-----IHHIYKLDIRGYFFKYLAAGVVPVK-LPTPCINLTYLWLSINFYDL 620
Query: 513 EQVQVVILLLRNYPNLKHLRISV 445
+++ + + R+ PNLK L I V
Sbjct: 621 KEISTALCVFRSSPNLKELNIFV 643
Score = 72.8 bits (177), Expect = 2e-10
Identities = 81/325 (24%), Positives = 142/325 (43%), Gaps = 10/325 (3%)
Frame = -3
Query: 1395 DAIKTSSLSKKWLNVCTSLTNIEFDQVKFERWSRG----KRQFKDFVNQTLVLHGGLDID 1228
D ++TS L KW T++ N+ FD+ S +R+ ++ L+L+ G I+
Sbjct: 28 DVVRTSVLCNKWRYKWTTIPNLVFDKQCVSATSHRPLVIERKLLAIIDHVLLLYSG-PIN 86
Query: 1227 KFSIYIDIGGISMSNVNSWIYFAVNHNVKEVDIAGYYGYFEKLPCCLFTCGTLSVLTLEY 1048
KF ++K++ I G K+P CLF+C +L L+L Y
Sbjct: 87 KFK----------------------RSIKKLVIEISKGQPYKIPWCLFSCQSLLHLSLSY 124
Query: 1047 VKLELP-TVVGLPKLKYLKIKFGRFFDENSTAQLFSSCPLLEELVISNCCFEDMNVNCIV 871
L+ P T+VG LK L++ +++ L CPLLE+L+ F++ +
Sbjct: 125 GLLKPPSTIVGFKNLKSLELDHFT-MSQDAFENLLFGCPLLEKLI-----FDEFEGFTKI 178
Query: 870 EISSPSLKSLTVLHD----RLVKSFYLPPVKISTSNLCNIRYYGNPPEICLETLSSLSNV 703
I++P+LKSL + + +F L V + S N N L+ + L +V
Sbjct: 179 NINAPNLKSLGISGKFEDISFINTFKLTCVAVDLSLYLNSESSSN----LLDFFTQLHHV 234
Query: 702 DFEFTSPLVTRARAILMGLQNVVRMVLRGFFIELLSRNEGSLACLPTSCFSLEYLQLDVK 523
+ S ++++ +VV L + L LPT C +L L L +
Sbjct: 235 YELYVSGYFSKSKF------SVVHQYLAAGVVPLK---------LPTPCINLMSLWLSIN 279
Query: 522 PSK-EQVQVVILLLRNYPNLKHLRI 451
++ +++ + + R+ PNLK L+I
Sbjct: 280 FNELKEISTALSVFRSSPNLKELKI 304