BLASTX nr result

ID: Coptis21_contig00010979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010979
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24014.3| unnamed protein product [Vitis vinifera]              123   2e-26
ref|XP_002262775.1| PREDICTED: probable WRKY transcription facto...   123   2e-26
gb|AFV70622.1| WRKY11 transcription factor [Vitis pseudoreticulata]   121   5e-26
dbj|BAA77358.1| DNA-binding protein NtWRKY3 [Nicotiana tabacum]       116   2e-24
ref|XP_002325248.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24

>emb|CBI24014.3| unnamed protein product [Vitis vinifera]
          Length = 267

 Score =  123 bits (308), Expect = 2e-26
 Identities = 60/80 (75%), Positives = 74/80 (92%), Gaps = 2/80 (2%)
 Frame = -1

Query: 497 MAVELLGFTKMNDQIAIQEAATAGIRSMEHLLQTLS--SSQNHQTHHLDCREITDFTVSK 324
           MAVELLGF+KM++QIAIQ+AA+AG++SMEHL++ LS  ++QNH  + LDCREITD+TVSK
Sbjct: 1   MAVELLGFSKMDEQIAIQDAASAGLKSMEHLIRMLSHQTNQNHNMNQLDCREITDYTVSK 60

Query: 323 FKKVISILNRSGHARFRRGP 264
           FKKVISILNR+GHARFRRGP
Sbjct: 61  FKKVISILNRTGHARFRRGP 80


>ref|XP_002262775.1| PREDICTED: probable WRKY transcription factor 11-like [Vitis
           vinifera] gi|183979106|emb|CAP08302.1| DNA-binding
           protein [Vitis thunbergii]
          Length = 338

 Score =  123 bits (308), Expect = 2e-26
 Identities = 60/80 (75%), Positives = 74/80 (92%), Gaps = 2/80 (2%)
 Frame = -1

Query: 497 MAVELLGFTKMNDQIAIQEAATAGIRSMEHLLQTLS--SSQNHQTHHLDCREITDFTVSK 324
           MAVELLGF+KM++QIAIQ+AA+AG++SMEHL++ LS  ++QNH  + LDCREITD+TVSK
Sbjct: 1   MAVELLGFSKMDEQIAIQDAASAGLKSMEHLIRMLSHQTNQNHNMNQLDCREITDYTVSK 60

Query: 323 FKKVISILNRSGHARFRRGP 264
           FKKVISILNR+GHARFRRGP
Sbjct: 61  FKKVISILNRTGHARFRRGP 80


>gb|AFV70622.1| WRKY11 transcription factor [Vitis pseudoreticulata]
          Length = 338

 Score =  121 bits (304), Expect = 5e-26
 Identities = 59/80 (73%), Positives = 74/80 (92%), Gaps = 2/80 (2%)
 Frame = -1

Query: 497 MAVELLGFTKMNDQIAIQEAATAGIRSMEHLLQTLS--SSQNHQTHHLDCREITDFTVSK 324
           MAVELLGF+K+++QIAIQ+AA+AG++SMEHL++ LS  ++QNH  + LDCREITD+TVSK
Sbjct: 1   MAVELLGFSKIDEQIAIQDAASAGLKSMEHLIRMLSHQTNQNHNMNQLDCREITDYTVSK 60

Query: 323 FKKVISILNRSGHARFRRGP 264
           FKKVISILNR+GHARFRRGP
Sbjct: 61  FKKVISILNRTGHARFRRGP 80


>dbj|BAA77358.1| DNA-binding protein NtWRKY3 [Nicotiana tabacum]
          Length = 328

 Score =  116 bits (291), Expect = 2e-24
 Identities = 53/78 (67%), Positives = 69/78 (88%)
 Frame = -1

Query: 497 MAVELLGFTKMNDQIAIQEAATAGIRSMEHLLQTLSSSQNHQTHHLDCREITDFTVSKFK 318
           MAV+ +GF+KMN+Q+A+QEAA+AG++SMEHL++ +S  Q  Q   LDCREITDFT+SKFK
Sbjct: 1   MAVDFIGFSKMNEQLALQEAASAGLKSMEHLIRLVSHQQQQQPVQLDCREITDFTLSKFK 60

Query: 317 KVISILNRSGHARFRRGP 264
           KV+SIL+R+GHARFRRGP
Sbjct: 61  KVVSILDRTGHARFRRGP 78


>ref|XP_002325248.1| predicted protein [Populus trichocarpa] gi|222866682|gb|EEF03813.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score =  116 bits (291), Expect = 2e-24
 Identities = 57/78 (73%), Positives = 70/78 (89%)
 Frame = -1

Query: 497 MAVELLGFTKMNDQIAIQEAATAGIRSMEHLLQTLSSSQNHQTHHLDCREITDFTVSKFK 318
           MAV+L+G++KM DQ+AIQEAA+AGI+SMEHL+  LS+ Q  Q+H LDCREIT FTV+KFK
Sbjct: 2   MAVDLVGYSKMEDQMAIQEAASAGIKSMEHLIFALSN-QTQQSHQLDCREITSFTVAKFK 60

Query: 317 KVISILNRSGHARFRRGP 264
           +VISILNR+GHARFRRGP
Sbjct: 61  QVISILNRTGHARFRRGP 78


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