BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010977
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE75875.1| unknown [Picea sitchensis]                              66   3e-09
ref|XP_002878025.1| hypothetical protein ARALYDRAFT_906938 [Arab...    62   4e-08
ref|XP_002876288.1| predicted protein [Arabidopsis lyrata subsp....    62   4e-08
dbj|BAD94072.1| spliceosomal - like protein [Arabidopsis thaliana]     62   4e-08
ref|NP_567015.1| splicing factor 3B subunit 3 [Arabidopsis thali...    62   4e-08

>gb|ADE75875.1| unknown [Picea sitchensis]
          Length = 173

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/46 (76%), Positives = 39/46 (84%)
 Frame = +1

Query: 1   NVIDGDLCEQFSTLSPVVQKKNADELDRRTSQEILKKLEDMRNKII 138
           +VIDGDLCEQF TL P +Q+K ADELD RT  EILKKLED+RNKII
Sbjct: 129 DVIDGDLCEQFPTLPPDLQRKIADELD-RTPGEILKKLEDIRNKII 173


>ref|XP_002878025.1| hypothetical protein ARALYDRAFT_906938 [Arabidopsis lyrata subsp.
           lyrata] gi|297323863|gb|EFH54284.1| hypothetical protein
           ARALYDRAFT_906938 [Arabidopsis lyrata subsp. lyrata]
          Length = 454

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/46 (73%), Positives = 37/46 (80%)
 Frame = +1

Query: 1   NVIDGDLCEQFSTLSPVVQKKNADELDRRTSQEILKKLEDMRNKII 138
           +VIDGDLCEQF TL   +Q+K ADELD RT  EILKKLED RNKII
Sbjct: 410 DVIDGDLCEQFPTLPMDLQRKIADELD-RTPAEILKKLEDARNKII 454


>ref|XP_002876288.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322126|gb|EFH52547.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 633

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/46 (73%), Positives = 37/46 (80%)
 Frame = +1

Query: 1   NVIDGDLCEQFSTLSPVVQKKNADELDRRTSQEILKKLEDMRNKII 138
           +VIDGDLCEQF TL   +Q+K ADELD RT  EILKKLED RNKII
Sbjct: 589 DVIDGDLCEQFPTLPMDLQRKIADELD-RTPAEILKKLEDARNKII 633


>dbj|BAD94072.1| spliceosomal - like protein [Arabidopsis thaliana]
          Length = 165

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/46 (73%), Positives = 37/46 (80%)
 Frame = +1

Query: 1   NVIDGDLCEQFSTLSPVVQKKNADELDRRTSQEILKKLEDMRNKII 138
           +VIDGDLCEQF TL   +Q+K ADELD RT  EILKKLED RNKII
Sbjct: 121 DVIDGDLCEQFPTLPMDLQRKIADELD-RTPAEILKKLEDARNKII 165


>ref|NP_567015.1| splicing factor 3B subunit 3 [Arabidopsis thaliana]
            gi|18410226|ref|NP_567016.1| putative splicing factor
            [Arabidopsis thaliana] gi|7019653|emb|CAB75754.1|
            spliceosomal-like protein [Arabidopsis thaliana]
            gi|7019655|emb|CAB75756.1| spliceosomal-like protein
            [Arabidopsis thaliana] gi|332645831|gb|AEE79352.1|
            splicing factor 3B subunit 3 [Arabidopsis thaliana]
            gi|332645833|gb|AEE79354.1| putative splicing factor
            [Arabidopsis thaliana]
          Length = 1214

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/46 (73%), Positives = 37/46 (80%)
 Frame = +1

Query: 1    NVIDGDLCEQFSTLSPVVQKKNADELDRRTSQEILKKLEDMRNKII 138
            +VIDGDLCEQF TL   +Q+K ADELD RT  EILKKLED RNKII
Sbjct: 1170 DVIDGDLCEQFPTLPMDLQRKIADELD-RTPAEILKKLEDARNKII 1214