BLASTX nr result

ID: Coptis21_contig00010970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010970
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518111.1| conserved hypothetical protein [Ricinus comm...    89   3e-16
ref|XP_002303829.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|XP_002301781.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-13
gb|ABK94910.1| unknown [Populus trichocarpa]                           80   1e-13
gb|AFK45695.1| unknown [Medicago truncatula]                           79   4e-13

>ref|XP_002518111.1| conserved hypothetical protein [Ricinus communis]
           gi|223542707|gb|EEF44244.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 424

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 45/95 (47%), Positives = 62/95 (65%), Gaps = 9/95 (9%)
 Frame = +2

Query: 2   CRCPYSHFPSICQLLHFLLLKMYPVAYKRREKQMLEDEKRRGFFSPQLGDNVLRAHSCEE 181
           CR PY+HFP++C+LLHFLLLKMYP+AYKRREKQ+ E+EK+ G FSPQ   +V  +HS ++
Sbjct: 12  CRHPYNHFPNVCRLLHFLLLKMYPIAYKRREKQVGEEEKQMGHFSPQFDHHVFGSHSNQD 71

Query: 182 ----SNYLDSP-----ETFSSMCFQTAPHGSTCSN 259
               +  + SP     + +S  CF      S+  N
Sbjct: 72  VDVPNKSVLSPTDVMAQDYSDDCFSRQTKSSSLPN 106


>ref|XP_002303829.1| predicted protein [Populus trichocarpa] gi|222841261|gb|EEE78808.1|
           predicted protein [Populus trichocarpa]
          Length = 469

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 43/84 (51%), Positives = 55/84 (65%)
 Frame = +2

Query: 2   CRCPYSHFPSICQLLHFLLLKMYPVAYKRREKQMLEDEKRRGFFSPQLGDNVLRAHSCEE 181
           CR  ++HFPS+CQLLHFLL+KMYP+AYKRRE+++ E+EK+ G FSPQ   +   +HS EE
Sbjct: 92  CRHQFNHFPSVCQLLHFLLMKMYPIAYKRREREVGEEEKKGGRFSPQFVHHPFGSHSGEE 151

Query: 182 SNYLDSPETFSSMCFQTAPHGSTC 253
              LD P    S  F   P    C
Sbjct: 152 ---LDFPS--YSQHFPIHPQNKLC 170


>ref|XP_002301781.1| predicted protein [Populus trichocarpa] gi|222843507|gb|EEE81054.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 37/71 (52%), Positives = 48/71 (67%), Gaps = 5/71 (7%)
 Frame = +2

Query: 2   CRCPYSHFPSICQLLHFLLLKMYPVAYKRREKQMLEDEKRRGFFSPQLG-----DNVLRA 166
           CR PY+HFP+ICQ+LHFLL K+YP+ Y RRE+Q LE+E   GFFSPQ G      ++   
Sbjct: 65  CRHPYNHFPTICQMLHFLLFKLYPMVYTRREEQTLEEEMEMGFFSPQFGYKECNSDLKHH 124

Query: 167 HSCEESNYLDS 199
           H  +  + LDS
Sbjct: 125 HPRDRKHALDS 135


>gb|ABK94910.1| unknown [Populus trichocarpa]
          Length = 469

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 37/71 (52%), Positives = 48/71 (67%), Gaps = 5/71 (7%)
 Frame = +2

Query: 2   CRCPYSHFPSICQLLHFLLLKMYPVAYKRREKQMLEDEKRRGFFSPQLG-----DNVLRA 166
           CR PY+HFP+ICQ+LHFLL K+YP+ Y RRE+Q LE+E   GFFSPQ G      ++   
Sbjct: 78  CRHPYNHFPTICQMLHFLLFKLYPMVYTRREEQTLEEEMEMGFFSPQFGYKECNSDLKHH 137

Query: 167 HSCEESNYLDS 199
           H  +  + LDS
Sbjct: 138 HPRDRKHALDS 148


>gb|AFK45695.1| unknown [Medicago truncatula]
          Length = 410

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 36/67 (53%), Positives = 46/67 (68%), Gaps = 5/67 (7%)
 Frame = +2

Query: 2   CRCPYSHFPSICQLLHFLLLKMYPVAYKRREKQMLEDEKRRGFFSPQLGDNVLRA----- 166
           CR  Y HFP++CQLLHFLLLK+YPVAY RR  Q LE+EK+ G++SPQ   +   +     
Sbjct: 63  CRHQYYHFPTVCQLLHFLLLKLYPVAYNRRTNQTLEEEKKSGYYSPQFDFDTCESQAKFG 122

Query: 167 HSCEESN 187
           HSC  S+
Sbjct: 123 HSCSPSS 129


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