BLASTX nr result

ID: Coptis21_contig00010969 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010969
         (1122 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266086.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-...   279   1e-72
emb|CBI37313.3| unnamed protein product [Vitis vinifera]              261   2e-67
ref|XP_002303829.1| predicted protein [Populus trichocarpa] gi|2...   258   1e-66
ref|XP_002301781.1| predicted protein [Populus trichocarpa] gi|2...   257   4e-66
gb|ABK94910.1| unknown [Populus trichocarpa]                          257   4e-66

>ref|XP_002266086.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like [Vitis vinifera]
          Length = 470

 Score =  279 bits (713), Expect = 1e-72
 Identities = 139/268 (51%), Positives = 179/268 (66%), Gaps = 7/268 (2%)
 Frame = +3

Query: 81  DVEDVEEAFICCVCLDLLYKPIVLACGHISCFWCVHWAMSGMGESHCPICRCPYCHFPSI 260
           D +++  +F CCVCLDLLYKPIVLACGHISCFWCVH++M G  ESHCPICR PY HFP+I
Sbjct: 14  DSDEISRSFTCCVCLDLLYKPIVLACGHISCFWCVHYSMDGAHESHCPICRNPYSHFPTI 73

Query: 261 CQLLHFLLLKMYPVAYKRREKQMLEEEKNRGFFSPQLGDNVLRAHSCEESNCVDSPETFS 440
           CQ+LHF+LLKMYPVAYKRREKQ LE E+    FSP+       +H+ ++      P   S
Sbjct: 74  CQMLHFMLLKMYPVAYKRREKQTLEREEETRCFSPRFDAYGGGSHTYKKLKIEADPADPS 133

Query: 441 SMCFQTAPYGSTCSNGKINTSSTVEKQTPDMLAHANASL-------LSAEAHSDSEVTNT 599
              F+       C +   ++S+ V+K   D++     SL       +S +    +    T
Sbjct: 134 ITVFEF----KLCPD---SSSNRVKKHFADLMQRQPVSLPQDFVIPISKQTSGGNPQGAT 186

Query: 600 LAVEESSILENDLKDGICKLFSISDVLCVACKQLLFRPAVLNCGHVYCQSCIVIPVNEAF 779
           LA EE+ +L+N+L D  C+  SI+DV C ACKQLLFRP VLNCGHVYC++C  IPV+E F
Sbjct: 187 LADEENVVLKNNL-DQTCEQLSIADVQCTACKQLLFRPVVLNCGHVYCETCFNIPVDERF 245

Query: 780 RCQLCQSSHPKGIPKVCLELDHLLEKRF 863
           RC++CQ  HP G PKVCLELD+ LE++F
Sbjct: 246 RCKVCQVLHPSGFPKVCLELDNFLEEQF 273


>emb|CBI37313.3| unnamed protein product [Vitis vinifera]
          Length = 451

 Score =  261 bits (668), Expect = 2e-67
 Identities = 133/255 (52%), Positives = 169/255 (66%), Gaps = 7/255 (2%)
 Frame = +3

Query: 120 CLDLLYKPIVLACGHISCFWCVHWAMSGMGESHCPICRCPYCHFPSICQLLHFLLLKMYP 299
           C DLLYKPIVLACGHISCFWCVH++M G  ESHCPICR PY HFP+ICQ+LHF+LLKMYP
Sbjct: 8   CRDLLYKPIVLACGHISCFWCVHYSMDGAHESHCPICRNPYSHFPTICQMLHFMLLKMYP 67

Query: 300 VAYKRREKQMLEEEKNRGFFSPQLGDNVLRAHSCEESNCVDSPETFSSMCFQTAPYGSTC 479
           VAYKRREKQ LE E+    FSP+       +H+ ++      P   S   F+       C
Sbjct: 68  VAYKRREKQTLEREEETRCFSPRFDAYGGGSHTYKKLKIEADPADPSITVFEF----KLC 123

Query: 480 SNGKINTSSTVEKQTPDMLAHANASL-------LSAEAHSDSEVTNTLAVEESSILENDL 638
            +   ++S+ V+K   D++     SL       +S +    +    TLA EE+ +L+N+L
Sbjct: 124 PD---SSSNRVKKHFADLMQRQPVSLPQDFVIPISKQTSGGNPQGATLADEENVVLKNNL 180

Query: 639 KDGICKLFSISDVLCVACKQLLFRPAVLNCGHVYCQSCIVIPVNEAFRCQLCQSSHPKGI 818
            D  C+  SI+DV C ACKQLLFRP VLNCGHVYC++C  IPV+E FRC++CQ  HP G 
Sbjct: 181 -DQTCEQLSIADVQCTACKQLLFRPVVLNCGHVYCETCFNIPVDERFRCKVCQVLHPSGF 239

Query: 819 PKVCLELDHLLEKRF 863
           PKVCLELD+ LE++F
Sbjct: 240 PKVCLELDNFLEEQF 254


>ref|XP_002303829.1| predicted protein [Populus trichocarpa] gi|222841261|gb|EEE78808.1|
           predicted protein [Populus trichocarpa]
          Length = 469

 Score =  258 bits (660), Expect = 1e-66
 Identities = 128/265 (48%), Positives = 168/265 (63%), Gaps = 2/265 (0%)
 Frame = +3

Query: 75  IDDVEDVEEAFICCVCLDLLYKPIVLACGHISCFWCVHWAMSGMGESHCPICRCPYCHFP 254
           + + ED  + F C VCLDLLYKP+VL CGH+SCFWCV ++M+G+ ESHCPICR  + HFP
Sbjct: 41  VREEEDFLDEFQCSVCLDLLYKPVVLGCGHLSCFWCVFYSMNGLRESHCPICRHQFNHFP 100

Query: 255 SICQLLHFLLLKMYPVAYKRREKQMLEEEKNRGFFSPQLGDNVLRAHSCEESNCVDSPET 434
           S+CQLLHFLL+KMYP+AYKRRE+++ EEEK  G FSPQ   +   +HS EE   +D P  
Sbjct: 101 SVCQLLHFLLMKMYPIAYKRREREVGEEEKKGGRFSPQFVHHPFGSHSGEE---LDFPS- 156

Query: 435 FSSMCFQTAPYGSTCSNGKINTSSTVEKQTPDMLAH--ANASLLSAEAHSDSEVTNTLAV 608
             S  F   P    C               P  +AH   N  ++ +   S S+ T   A+
Sbjct: 157 -YSQHFPIHPQNKLC-------------YFPKAIAHREENMKIVPSTLSSRSDGTTNAAI 202

Query: 609 EESSILENDLKDGICKLFSISDVLCVACKQLLFRPAVLNCGHVYCQSCIVIPVNEAFRCQ 788
           E  +++  +   GI    S++D+LC  CK+LLF+P VLNCGHVYC+SCI  P+    RCQ
Sbjct: 203 ENCNLIGTEFGHGIKTQASVADLLCAECKKLLFQPVVLNCGHVYCESCIASPMQGIPRCQ 262

Query: 789 LCQSSHPKGIPKVCLELDHLLEKRF 863
           +CQS HP GIP VCL L+H LE++F
Sbjct: 263 ICQSLHPNGIPSVCLVLEHFLEEQF 287


>ref|XP_002301781.1| predicted protein [Populus trichocarpa] gi|222843507|gb|EEE81054.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score =  257 bits (656), Expect = 4e-66
 Identities = 131/263 (49%), Positives = 168/263 (63%), Gaps = 4/263 (1%)
 Frame = +3

Query: 87  EDVEEAFICCVCLDLLYKPIVLACGHISCFWCVHWAMSGMGESHCPICRCPYCHFPSICQ 266
           E+  ++F C VCLDLLYKPIVL+CGHISCFWCVH +MSG+ ES+CPICR PY HFP+ICQ
Sbjct: 18  EEFSDSFRCSVCLDLLYKPIVLSCGHISCFWCVHKSMSGLRESNCPICRHPYNHFPTICQ 77

Query: 267 LLHFLLLKMYPVAYKRREKQMLEEEKNRGFFSPQLGDNVLRAHSCEESNCVDSPETFSSM 446
           +LHFLL K+YP+ Y RRE+Q LEEE   GFFSPQ G     +   +  +  D      S 
Sbjct: 78  MLHFLLFKLYPMVYTRREEQTLEEEMEMGFFSPQFGYKECNS-DLKHHHPRDRKHALDSC 136

Query: 447 CFQTAPY-GSTCSNGKINTSSTVEKQT---PDMLAHANASLLSAEAHSDSEVTNTLAVEE 614
            F+   + GST     + + S ++  T   P+ +   N  ++  +           +VEE
Sbjct: 137 FFRNGEFCGSTQQIESVKSVSMIQAPTMSIPNKVCDENCCMIKPD-----------SVEE 185

Query: 615 SSILENDLKDGICKLFSISDVLCVACKQLLFRPAVLNCGHVYCQSCIVIPVNEAFRCQLC 794
           +++ E D  +  CK  SI+DV C  CKQLLF P VLNCGHVYC++CI  PVNE   CQ+C
Sbjct: 186 NNLPE-DKSNRNCKQVSIADVQCSTCKQLLFHPVVLNCGHVYCETCIG-PVNEMLTCQVC 243

Query: 795 QSSHPKGIPKVCLELDHLLEKRF 863
           QS HP+G PKVCLE DH LE+ F
Sbjct: 244 QSLHPRGFPKVCLEFDHFLEEYF 266


>gb|ABK94910.1| unknown [Populus trichocarpa]
          Length = 469

 Score =  257 bits (656), Expect = 4e-66
 Identities = 131/263 (49%), Positives = 168/263 (63%), Gaps = 4/263 (1%)
 Frame = +3

Query: 87  EDVEEAFICCVCLDLLYKPIVLACGHISCFWCVHWAMSGMGESHCPICRCPYCHFPSICQ 266
           E+  ++F C VCLDLLYKPIVL+CGHISCFWCVH +MSG+ ES+CPICR PY HFP+ICQ
Sbjct: 31  EEFSDSFRCSVCLDLLYKPIVLSCGHISCFWCVHKSMSGLRESNCPICRHPYNHFPTICQ 90

Query: 267 LLHFLLLKMYPVAYKRREKQMLEEEKNRGFFSPQLGDNVLRAHSCEESNCVDSPETFSSM 446
           +LHFLL K+YP+ Y RRE+Q LEEE   GFFSPQ G     +   +  +  D      S 
Sbjct: 91  MLHFLLFKLYPMVYTRREEQTLEEEMEMGFFSPQFGYKECNS-DLKHHHPRDRKHALDSC 149

Query: 447 CFQTAPY-GSTCSNGKINTSSTVEKQT---PDMLAHANASLLSAEAHSDSEVTNTLAVEE 614
            F+   + GST     + + S ++  T   P+ +   N  ++  +           +VEE
Sbjct: 150 FFRNGEFCGSTQQIESVKSVSMIQAPTMSIPNKVCDENCCMIKPD-----------SVEE 198

Query: 615 SSILENDLKDGICKLFSISDVLCVACKQLLFRPAVLNCGHVYCQSCIVIPVNEAFRCQLC 794
           +++ E D  +  CK  SI+DV C  CKQLLF P VLNCGHVYC++CI  PVNE   CQ+C
Sbjct: 199 NNLPE-DKSNRNCKQVSIADVQCSTCKQLLFHPVVLNCGHVYCETCIG-PVNEMLTCQVC 256

Query: 795 QSSHPKGIPKVCLELDHLLEKRF 863
           QS HP+G PKVCLE DH LE+ F
Sbjct: 257 QSLHPRGFPKVCLEFDHFLEEYF 279


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