BLASTX nr result

ID: Coptis21_contig00010964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010964
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003638319.1| Ubiquitin carboxyl-terminal hydrolase family...   127   7e-28
ref|XP_003601358.1| Ubiquitin carboxyl-terminal hydrolase family...   127   7e-28
ref|XP_003555566.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   127   9e-28
ref|XP_002524120.1| Ubiquitin carboxyl-terminal hydrolase, putat...   127   9e-28
ref|XP_003576181.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   127   1e-27

>ref|XP_003638319.1| Ubiquitin carboxyl-terminal hydrolase family protein [Medicago
           truncatula] gi|355504254|gb|AES85457.1| Ubiquitin
           carboxyl-terminal hydrolase family protein [Medicago
           truncatula]
          Length = 368

 Score =  127 bits (320), Expect = 7e-28
 Identities = 63/91 (69%), Positives = 71/91 (78%), Gaps = 3/91 (3%)
 Frame = +2

Query: 2   DAQHKFNRRESDWGFTSFIPFCKLHDPKEGFLVNGTLIIEAEVADGMVVD---YDLKMKT 172
           D QH+FN RESDWGFTSF+P  +L+DP  G+LVN TLIIEAEV    +VD   YD K +T
Sbjct: 127 DTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLIIEAEVLVRKIVDYWNYDSKKET 186

Query: 173 CYVGLKNQGATSYINSLLQALYHIPYFRKTV 265
            YVGLKNQGAT Y+NSLLQ LYHIPYFRK V
Sbjct: 187 GYVGLKNQGATCYMNSLLQTLYHIPYFRKAV 217


>ref|XP_003601358.1| Ubiquitin carboxyl-terminal hydrolase family protein [Medicago
           truncatula] gi|355490406|gb|AES71609.1| Ubiquitin
           carboxyl-terminal hydrolase family protein [Medicago
           truncatula]
          Length = 1146

 Score =  127 bits (320), Expect = 7e-28
 Identities = 63/91 (69%), Positives = 71/91 (78%), Gaps = 3/91 (3%)
 Frame = +2

Query: 2   DAQHKFNRRESDWGFTSFIPFCKLHDPKEGFLVNGTLIIEAEVADGMVVD---YDLKMKT 172
           D QH+FN RESDWGFTSF+P  +L+DP  G+LVN TLIIEAEV    +VD   YD K +T
Sbjct: 137 DTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLIIEAEVLVRKIVDYWNYDSKKET 196

Query: 173 CYVGLKNQGATSYINSLLQALYHIPYFRKTV 265
            YVGLKNQGAT Y+NSLLQ LYHIPYFRK V
Sbjct: 197 GYVGLKNQGATCYMNSLLQTLYHIPYFRKAV 227


>ref|XP_003555566.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Glycine
           max]
          Length = 1118

 Score =  127 bits (319), Expect = 9e-28
 Identities = 62/91 (68%), Positives = 71/91 (78%), Gaps = 3/91 (3%)
 Frame = +2

Query: 2   DAQHKFNRRESDWGFTSFIPFCKLHDPKEGFLVNGTLIIEAEVADGMVVD---YDLKMKT 172
           D QH+FN RESDWGFTSF+P  +L+DP  G+LVN TLI+EAEV    +VD   YD K +T
Sbjct: 137 DTQHQFNARESDWGFTSFMPLGELYDPSRGYLVNDTLIVEAEVLVRRIVDYWTYDSKKET 196

Query: 173 CYVGLKNQGATSYINSLLQALYHIPYFRKTV 265
            YVGLKNQGAT Y+NSLLQ LYHIPYFRK V
Sbjct: 197 GYVGLKNQGATCYMNSLLQTLYHIPYFRKAV 227


>ref|XP_002524120.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
           gi|223536688|gb|EEF38330.1| Ubiquitin carboxyl-terminal
           hydrolase, putative [Ricinus communis]
          Length = 1120

 Score =  127 bits (319), Expect = 9e-28
 Identities = 62/91 (68%), Positives = 71/91 (78%), Gaps = 3/91 (3%)
 Frame = +2

Query: 2   DAQHKFNRRESDWGFTSFIPFCKLHDPKEGFLVNGTLIIEAEVADGMVVD---YDLKMKT 172
           D QH+FN RESDWGFTSF+P   L+DP  G+LVN T+I+EAEVA   V+D   YD K +T
Sbjct: 134 DTQHQFNARESDWGFTSFMPLSDLYDPSRGYLVNDTVIVEAEVAVRKVLDYWSYDSKKET 193

Query: 173 CYVGLKNQGATSYINSLLQALYHIPYFRKTV 265
            YVGLKNQGAT Y+NSLLQ LYHIPYFRK V
Sbjct: 194 GYVGLKNQGATCYMNSLLQTLYHIPYFRKAV 224


>ref|XP_003576181.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like
           [Brachypodium distachyon]
          Length = 1120

 Score =  127 bits (318), Expect = 1e-27
 Identities = 61/91 (67%), Positives = 72/91 (79%), Gaps = 3/91 (3%)
 Frame = +2

Query: 2   DAQHKFNRRESDWGFTSFIPFCKLHDPKEGFLVNGTLIIEAEVADGMVVD---YDLKMKT 172
           D QH+FN RESDWGFTSF+P  +L+DP  G+L+N T++IEAEVA   +VD   YD K +T
Sbjct: 140 DTQHQFNARESDWGFTSFMPLSELYDPSRGYLLNDTVVIEAEVAVRKMVDYWTYDSKKET 199

Query: 173 CYVGLKNQGATSYINSLLQALYHIPYFRKTV 265
            YVGLKNQGAT Y+NSLLQ LYHIPYFRK V
Sbjct: 200 GYVGLKNQGATCYMNSLLQTLYHIPYFRKAV 230


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