BLASTX nr result

ID: Coptis21_contig00010955 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010955
         (1148 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265851.1| PREDICTED: uncharacterized protein LOC100265...   447   e-123
ref|XP_002309171.1| predicted protein [Populus trichocarpa] gi|2...   439   e-121
ref|XP_002533792.1| D-alanine-D-alanine ligase, putative [Ricinu...   420   e-115
ref|XP_003534663.1| PREDICTED: uncharacterized protein LOC100819...   417   e-114
ref|XP_003551592.1| PREDICTED: uncharacterized protein LOC100775...   417   e-114

>ref|XP_002265851.1| PREDICTED: uncharacterized protein LOC100265424 [Vitis vinifera]
           gi|297735584|emb|CBI18078.3| unnamed protein product
           [Vitis vinifera]
          Length = 952

 Score =  447 bits (1149), Expect = e-123
 Identities = 229/311 (73%), Positives = 264/311 (84%), Gaps = 7/311 (2%)
 Frame = -3

Query: 912 SNLVSNKLLYKRSLTTFIRCVKTEVIVE-----EKGSVKDKVLRVGLVCGGPSAERGISL 748
           SN V N  L + S    +R   TEV+V+     E G  K +VLRVG++CGGPSAERGISL
Sbjct: 36  SNSVKNCSLARCSGVGVVRAA-TEVVVDDPVVREGGKEKGRVLRVGVICGGPSAERGISL 94

Query: 747 NSARSVLDHIQGDGLDVRCYYIDCNLNAFAISSAQVYSNTPTDFDFKLESLAQSFQSLAE 568
           NSARSV+DHIQGD L V CYYIDCNLNA+AIS AQVYSNTPTDFDFKLESLAQ F+SL++
Sbjct: 95  NSARSVIDHIQGDDLLVSCYYIDCNLNAYAISPAQVYSNTPTDFDFKLESLAQGFRSLSD 154

Query: 567 FTEHLASSVDIVFPVIHGRFGEDGGIQELLEKANIPFVGTPSQECRRAFDKFEASLELKK 388
           F EHLA+SVDIVFPVIHGRFGEDGGIQELLEK+NIPFVGT S ECR+AFDK+++SLEL +
Sbjct: 155 FAEHLAASVDIVFPVIHGRFGEDGGIQELLEKSNIPFVGTRSNECRQAFDKYDSSLELDR 214

Query: 387 QGFVTVPNFLVQGGTMIKSELIDWFQSNQINSDTGKVVVKPARAGSSIGVTVAYGVDDSI 208
           QGFVT+PNFLVQG    +SEL  WF  N +++++GKVVVKP RAGSSIGVTVAYGV DS+
Sbjct: 215 QGFVTLPNFLVQGSHSNESELSKWFAENHLDTNSGKVVVKPTRAGSSIGVTVAYGVADSL 274

Query: 207 KKANDIISEGIDDRVVVEVFLEGGSEFTAIVLDVGSGFEFHPVVLLPTEVELHFHDN--V 34
           KKAN+II+EGIDDRV+VE+FLEGGSEFTAIVLDVGSGF+ HPVVLLPTEVE+  HDN  +
Sbjct: 275 KKANEIIAEGIDDRVLVEIFLEGGSEFTAIVLDVGSGFDCHPVVLLPTEVEIQLHDNADM 334

Query: 33  REEDAIFNYRR 1
           RE+DAIFNYRR
Sbjct: 335 REKDAIFNYRR 345


>ref|XP_002309171.1| predicted protein [Populus trichocarpa] gi|222855147|gb|EEE92694.1|
           predicted protein [Populus trichocarpa]
          Length = 931

 Score =  439 bits (1129), Expect = e-121
 Identities = 219/286 (76%), Positives = 252/286 (88%), Gaps = 4/286 (1%)
 Frame = -3

Query: 846 TEVIVEEKGSVKD--KVLRVGLVCGGPSAERGISLNSARSVLDHIQGDGLDVRCYYIDCN 673
           TE +V+     K+  +VLRVGL+CGGPSAERGISLNSARSVLDHI+GD L V CYYID +
Sbjct: 65  TEAVVDNNRVSKEDSRVLRVGLICGGPSAERGISLNSARSVLDHIEGDDLQVSCYYIDYD 124

Query: 672 LNAFAISSAQVYSNTPTDFDFKLESLAQSFQSLAEFTEHLASSVDIVFPVIHGRFGEDGG 493
           +NAFAISSAQVYSNTP DFDFKLESLA+ F SL EF EHLA+SVDIVFPVIHGRFGEDGG
Sbjct: 125 MNAFAISSAQVYSNTPADFDFKLESLAKGFSSLDEFAEHLAASVDIVFPVIHGRFGEDGG 184

Query: 492 IQELLEKANIPFVGTPSQECRRAFDKFEASLELKKQGFVTVPNFLVQGGTMIKSELIDWF 313
           IQELLE+ N+PFVGT S+ECR+AFDK++ASLEL KQGF+TVP+FLVQG  + + EL  WF
Sbjct: 185 IQELLERHNVPFVGTGSRECRKAFDKYDASLELSKQGFITVPSFLVQGSEIEECELSKWF 244

Query: 312 QSNQINSDTGKVVVKPARAGSSIGVTVAYGVDDSIKKANDIISEGIDDRVVVEVFLEGGS 133
            SNQ++ ++GKVVVKPARAGSSIGVTVAYGV DS+KKAND+ISEGIDD+++VE+FLEGGS
Sbjct: 245 TSNQLDPNSGKVVVKPARAGSSIGVTVAYGVSDSLKKANDLISEGIDDKILVEIFLEGGS 304

Query: 132 EFTAIVLDVGSGFEFHPVVLLPTEVELHFHD--NVREEDAIFNYRR 1
           EFTAIVLDVGSGF+ HPVVLLPTEVE+ FH   +VREEDAIFNYRR
Sbjct: 305 EFTAIVLDVGSGFDCHPVVLLPTEVEIQFHGSVDVREEDAIFNYRR 350


>ref|XP_002533792.1| D-alanine-D-alanine ligase, putative [Ricinus communis]
           gi|223526281|gb|EEF28594.1| D-alanine-D-alanine ligase,
           putative [Ricinus communis]
          Length = 1000

 Score =  420 bits (1079), Expect = e-115
 Identities = 212/286 (74%), Positives = 241/286 (84%), Gaps = 2/286 (0%)
 Frame = -3

Query: 852 VKTEVIVEEKGSVKDKVLRVGLVCGGPSAERGISLNSARSVLDHIQGDGLDVRCYYIDCN 673
           V   V+  EK    ++VL+VGL+CGGPSAERGISLNSARSVLDHIQG+ L V CYYID  
Sbjct: 67  VDDRVLQNEKAEEGNRVLKVGLICGGPSAERGISLNSARSVLDHIQGEDLHVSCYYIDYE 126

Query: 672 LNAFAISSAQVYSNTPTDFDFKLESLAQSFQSLAEFTEHLASSVDIVFPVIHGRFGEDGG 493
           LNA+AIS AQVYSNTP DFDFKLESLA+ F SL+EF EHLA+SVDIVFPVIHGRFGEDGG
Sbjct: 127 LNAYAISPAQVYSNTPADFDFKLESLARQFSSLSEFAEHLAASVDIVFPVIHGRFGEDGG 186

Query: 492 IQELLEKANIPFVGTPSQECRRAFDKFEASLELKKQGFVTVPNFLVQGGTMIKSELIDWF 313
           IQELLE  NIPFVGT S ECR+AFDK+ AS+EL K+GF+TVPNFLVQG    +SEL  WF
Sbjct: 187 IQELLENYNIPFVGTGSSECRQAFDKYYASIELSKRGFITVPNFLVQGKEADESELFKWF 246

Query: 312 QSNQINSDTGKVVVKPARAGSSIGVTVAYGVDDSIKKANDIISEGIDDRVVVEVFLEGGS 133
            SN+++  +G VVVKPA AGSSIGVTVAYGV DS+KKA D+I EGIDD+V+VE+FL+GGS
Sbjct: 247 ASNRLDPTSGTVVVKPAVAGSSIGVTVAYGVADSLKKAKDLILEGIDDKVLVELFLDGGS 306

Query: 132 EFTAIVLDVGSGFEFHPVVLLPTEVELHFHD--NVREEDAIFNYRR 1
           EFTAIV+DVGSGFE HPVVLLPTEVEL FH   ++RE DAIFNYRR
Sbjct: 307 EFTAIVVDVGSGFECHPVVLLPTEVELQFHGSADIRENDAIFNYRR 352


>ref|XP_003534663.1| PREDICTED: uncharacterized protein LOC100819595 [Glycine max]
          Length = 949

 Score =  417 bits (1072), Expect = e-114
 Identities = 209/288 (72%), Positives = 246/288 (85%), Gaps = 2/288 (0%)
 Frame = -3

Query: 858 RCVKTEVIVEEKGSVKDKVLRVGLVCGGPSAERGISLNSARSVLDHIQGDGLDVRCYYID 679
           R    EV V EKG  K +VL++GL+CGGPSAERGISLNSARSVLDH+QGD L V CYYID
Sbjct: 54  RASAPEVAVVEKGREKVRVLKLGLICGGPSAERGISLNSARSVLDHLQGDDLHVSCYYID 113

Query: 678 CNLNAFAISSAQVYSNTPTDFDFKLESLAQSFQSLAEFTEHLASSVDIVFPVIHGRFGED 499
           CNLNAFAISSAQVYSNTP DFDFKLESLAQSFQ+L++  +HLA++VDIVFPVIHG+FGED
Sbjct: 114 CNLNAFAISSAQVYSNTPADFDFKLESLAQSFQTLSDLAKHLATAVDIVFPVIHGQFGED 173

Query: 498 GGIQELLEKANIPFVGTPSQECRRAFDKFEASLELKKQGFVTVPNFLVQGGTMIKSELID 319
           GGIQELLEK N+PFVGT S+EC +AFDK +ASLEL+K GF+TVP+FLVQG    KSEL +
Sbjct: 174 GGIQELLEKYNVPFVGTGSKECCQAFDKHKASLELRKHGFITVPSFLVQGYETDKSELSE 233

Query: 318 WFQSNQINSDTGKVVVKPARAGSSIGVTVAYGVDDSIKKANDIISEGIDDRVVVEVFLEG 139
           WF+ +Q++ D GKVVVKP R GSSIGV VAYGV+DS+ KAN+I+SEGID +V++E+FLEG
Sbjct: 234 WFKKHQLDPDLGKVVVKPTRGGSSIGVGVAYGVNDSLVKANEIMSEGIDKKVLIEIFLEG 293

Query: 138 GSEFTAIVLDVGSGFEFHPVVLLPTEVELHFH--DNVREEDAIFNYRR 1
           G+EFTAIVLDVGS  +  PVVLLPTEVEL F   ++V+E DAIFNYRR
Sbjct: 294 GNEFTAIVLDVGSDLDSFPVVLLPTEVELQFRGANDVKENDAIFNYRR 341


>ref|XP_003551592.1| PREDICTED: uncharacterized protein LOC100775955 [Glycine max]
          Length = 955

 Score =  417 bits (1071), Expect = e-114
 Identities = 207/280 (73%), Positives = 244/280 (87%), Gaps = 2/280 (0%)
 Frame = -3

Query: 834 VEEKGSVKDKVLRVGLVCGGPSAERGISLNSARSVLDHIQGDGLDVRCYYIDCNLNAFAI 655
           V EKG  K +VL+VGL+CGGPSAERGISLNSARSVLDH+QGD L V CYYIDCNLNAFAI
Sbjct: 68  VVEKGREKGRVLKVGLICGGPSAERGISLNSARSVLDHLQGDDLHVSCYYIDCNLNAFAI 127

Query: 654 SSAQVYSNTPTDFDFKLESLAQSFQSLAEFTEHLASSVDIVFPVIHGRFGEDGGIQELLE 475
           SSAQVYSNTP DFDFKLESLAQSFQ+L++  +HLA++VDIVFPVIHG+FGEDGGIQELLE
Sbjct: 128 SSAQVYSNTPADFDFKLESLAQSFQTLSDLAKHLATAVDIVFPVIHGQFGEDGGIQELLE 187

Query: 474 KANIPFVGTPSQECRRAFDKFEASLELKKQGFVTVPNFLVQGGTMIKSELIDWFQSNQIN 295
           K N+PFVGT S+EC +AFDK +ASLEL+K GF+TVP+FLVQG    KSEL +WF+ +Q++
Sbjct: 188 KYNVPFVGTGSKECCQAFDKHKASLELRKHGFITVPSFLVQGYETKKSELSEWFEKHQLD 247

Query: 294 SDTGKVVVKPARAGSSIGVTVAYGVDDSIKKANDIISEGIDDRVVVEVFLEGGSEFTAIV 115
            D GKVVVKP R GSSIGV VAYGV+DS+ KAN+I+SEGID++V++E++LEGGSEFTAIV
Sbjct: 248 PDLGKVVVKPTRGGSSIGVRVAYGVNDSLVKANEIMSEGIDNKVLIEIYLEGGSEFTAIV 307

Query: 114 LDVGSGFEFHPVVLLPTEVELHFH--DNVREEDAIFNYRR 1
           LDVGS  +  PVVLLPTEVEL F   ++V+E DAIFNYRR
Sbjct: 308 LDVGSASDSFPVVLLPTEVELQFRGANDVKENDAIFNYRR 347


Top