BLASTX nr result

ID: Coptis21_contig00010953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010953
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAC98494.1| AG-motif binding protein-4 [Nicotiana tabacum]         55   8e-06

>dbj|BAC98494.1| AG-motif binding protein-4 [Nicotiana tabacum]
          Length = 326

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/58 (48%), Positives = 40/58 (68%)
 Frame = +1

Query: 166 MDCVETKALKTSFWPEMSALKTTTTTQQIFNEDLWCGNGTNGVAGDDLFVEGLLDFSN 339
           M+ +E +ALK+SF  +M A+KT+   QQ+F +D+WC  G N V  DD  V+ LLDFS+
Sbjct: 1   MELIEARALKSSFLSDM-AMKTS---QQVFLDDIWCVAGINNVPSDDFSVDDLLDFSD 54


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