BLASTX nr result

ID: Coptis21_contig00010946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010946
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514900.1| nuclear transport factor, putative [Ricinus ...   128   4e-28
ref|XP_002276841.1| PREDICTED: nuclear transport factor 2 isofor...   127   9e-28
ref|XP_004156943.1| PREDICTED: nuclear transport factor 2-like [...   127   1e-27
ref|XP_004152114.1| PREDICTED: nuclear transport factor 2-like [...   127   1e-27
gb|AFK49295.1| unknown [Lotus japonicus]                              125   5e-27

>ref|XP_002514900.1| nuclear transport factor, putative [Ricinus communis]
           gi|223545951|gb|EEF47454.1| nuclear transport factor,
           putative [Ricinus communis]
          Length = 123

 Score =  128 bits (322), Expect = 4e-28
 Identities = 59/70 (84%), Positives = 65/70 (92%)
 Frame = +1

Query: 25  MDPDGVAKQFVDHYYTTFDADRTGLGNLYQESSMLTFEGQKIQGSTNIVAKLTSLPFQQC 204
           MDPD VAK FV+HYYTTFDA+R GL NLYQE+SMLTFEGQKIQG+ N+VAKLTSLPFQQC
Sbjct: 1   MDPDAVAKAFVEHYYTTFDANRAGLANLYQEASMLTFEGQKIQGAQNVVAKLTSLPFQQC 60

Query: 205 KHSITTVDCQ 234
           +HSITTVDCQ
Sbjct: 61  QHSITTVDCQ 70


>ref|XP_002276841.1| PREDICTED: nuclear transport factor 2 isoform 1 [Vitis vinifera]
           gi|147821626|emb|CAN70316.1| hypothetical protein
           VITISV_001831 [Vitis vinifera]
          Length = 123

 Score =  127 bits (319), Expect = 9e-28
 Identities = 60/70 (85%), Positives = 64/70 (91%)
 Frame = +1

Query: 25  MDPDGVAKQFVDHYYTTFDADRTGLGNLYQESSMLTFEGQKIQGSTNIVAKLTSLPFQQC 204
           MDPD VAK FV+HYY+TFDA+R  L NLYQESSMLTFEGQKIQGS NIVAKLTSLPFQQC
Sbjct: 1   MDPDAVAKAFVEHYYSTFDANRANLANLYQESSMLTFEGQKIQGSPNIVAKLTSLPFQQC 60

Query: 205 KHSITTVDCQ 234
           +HSITTVDCQ
Sbjct: 61  QHSITTVDCQ 70


>ref|XP_004156943.1| PREDICTED: nuclear transport factor 2-like [Cucumis sativus]
          Length = 173

 Score =  127 bits (318), Expect = 1e-27
 Identities = 58/70 (82%), Positives = 65/70 (92%)
 Frame = +1

Query: 25  MDPDGVAKQFVDHYYTTFDADRTGLGNLYQESSMLTFEGQKIQGSTNIVAKLTSLPFQQC 204
           MDPD VAK FVDHYY+TFDA+R  LGNLYQ++SMLTFEGQKIQGS NIVAKL+SLPFQQC
Sbjct: 51  MDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQC 110

Query: 205 KHSITTVDCQ 234
           KHS++TVDCQ
Sbjct: 111 KHSVSTVDCQ 120


>ref|XP_004152114.1| PREDICTED: nuclear transport factor 2-like [Cucumis sativus]
          Length = 173

 Score =  127 bits (318), Expect = 1e-27
 Identities = 58/70 (82%), Positives = 65/70 (92%)
 Frame = +1

Query: 25  MDPDGVAKQFVDHYYTTFDADRTGLGNLYQESSMLTFEGQKIQGSTNIVAKLTSLPFQQC 204
           MDPD VAK FVDHYY+TFDA+R  LGNLYQ++SMLTFEGQKIQGS NIVAKL+SLPFQQC
Sbjct: 51  MDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQC 110

Query: 205 KHSITTVDCQ 234
           KHS++TVDCQ
Sbjct: 111 KHSVSTVDCQ 120


>gb|AFK49295.1| unknown [Lotus japonicus]
          Length = 123

 Score =  125 bits (313), Expect = 5e-27
 Identities = 58/70 (82%), Positives = 63/70 (90%)
 Frame = +1

Query: 25  MDPDGVAKQFVDHYYTTFDADRTGLGNLYQESSMLTFEGQKIQGSTNIVAKLTSLPFQQC 204
           MDPD +AK FV+HYY+TFD +R GL NLYQE SMLTFEGQKIQGSTNIVAKLTSLPFQQC
Sbjct: 1   MDPDALAKAFVEHYYSTFDGNRAGLANLYQEGSMLTFEGQKIQGSTNIVAKLTSLPFQQC 60

Query: 205 KHSITTVDCQ 234
            HSI+TVDCQ
Sbjct: 61  LHSISTVDCQ 70


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