BLASTX nr result
ID: Coptis21_contig00010946
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00010946 (234 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002514900.1| nuclear transport factor, putative [Ricinus ... 128 4e-28 ref|XP_002276841.1| PREDICTED: nuclear transport factor 2 isofor... 127 9e-28 ref|XP_004156943.1| PREDICTED: nuclear transport factor 2-like [... 127 1e-27 ref|XP_004152114.1| PREDICTED: nuclear transport factor 2-like [... 127 1e-27 gb|AFK49295.1| unknown [Lotus japonicus] 125 5e-27 >ref|XP_002514900.1| nuclear transport factor, putative [Ricinus communis] gi|223545951|gb|EEF47454.1| nuclear transport factor, putative [Ricinus communis] Length = 123 Score = 128 bits (322), Expect = 4e-28 Identities = 59/70 (84%), Positives = 65/70 (92%) Frame = +1 Query: 25 MDPDGVAKQFVDHYYTTFDADRTGLGNLYQESSMLTFEGQKIQGSTNIVAKLTSLPFQQC 204 MDPD VAK FV+HYYTTFDA+R GL NLYQE+SMLTFEGQKIQG+ N+VAKLTSLPFQQC Sbjct: 1 MDPDAVAKAFVEHYYTTFDANRAGLANLYQEASMLTFEGQKIQGAQNVVAKLTSLPFQQC 60 Query: 205 KHSITTVDCQ 234 +HSITTVDCQ Sbjct: 61 QHSITTVDCQ 70 >ref|XP_002276841.1| PREDICTED: nuclear transport factor 2 isoform 1 [Vitis vinifera] gi|147821626|emb|CAN70316.1| hypothetical protein VITISV_001831 [Vitis vinifera] Length = 123 Score = 127 bits (319), Expect = 9e-28 Identities = 60/70 (85%), Positives = 64/70 (91%) Frame = +1 Query: 25 MDPDGVAKQFVDHYYTTFDADRTGLGNLYQESSMLTFEGQKIQGSTNIVAKLTSLPFQQC 204 MDPD VAK FV+HYY+TFDA+R L NLYQESSMLTFEGQKIQGS NIVAKLTSLPFQQC Sbjct: 1 MDPDAVAKAFVEHYYSTFDANRANLANLYQESSMLTFEGQKIQGSPNIVAKLTSLPFQQC 60 Query: 205 KHSITTVDCQ 234 +HSITTVDCQ Sbjct: 61 QHSITTVDCQ 70 >ref|XP_004156943.1| PREDICTED: nuclear transport factor 2-like [Cucumis sativus] Length = 173 Score = 127 bits (318), Expect = 1e-27 Identities = 58/70 (82%), Positives = 65/70 (92%) Frame = +1 Query: 25 MDPDGVAKQFVDHYYTTFDADRTGLGNLYQESSMLTFEGQKIQGSTNIVAKLTSLPFQQC 204 MDPD VAK FVDHYY+TFDA+R LGNLYQ++SMLTFEGQKIQGS NIVAKL+SLPFQQC Sbjct: 51 MDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQC 110 Query: 205 KHSITTVDCQ 234 KHS++TVDCQ Sbjct: 111 KHSVSTVDCQ 120 >ref|XP_004152114.1| PREDICTED: nuclear transport factor 2-like [Cucumis sativus] Length = 173 Score = 127 bits (318), Expect = 1e-27 Identities = 58/70 (82%), Positives = 65/70 (92%) Frame = +1 Query: 25 MDPDGVAKQFVDHYYTTFDADRTGLGNLYQESSMLTFEGQKIQGSTNIVAKLTSLPFQQC 204 MDPD VAK FVDHYY+TFDA+R LGNLYQ++SMLTFEGQKIQGS NIVAKL+SLPFQQC Sbjct: 51 MDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIVAKLSSLPFQQC 110 Query: 205 KHSITTVDCQ 234 KHS++TVDCQ Sbjct: 111 KHSVSTVDCQ 120 >gb|AFK49295.1| unknown [Lotus japonicus] Length = 123 Score = 125 bits (313), Expect = 5e-27 Identities = 58/70 (82%), Positives = 63/70 (90%) Frame = +1 Query: 25 MDPDGVAKQFVDHYYTTFDADRTGLGNLYQESSMLTFEGQKIQGSTNIVAKLTSLPFQQC 204 MDPD +AK FV+HYY+TFD +R GL NLYQE SMLTFEGQKIQGSTNIVAKLTSLPFQQC Sbjct: 1 MDPDALAKAFVEHYYSTFDGNRAGLANLYQEGSMLTFEGQKIQGSTNIVAKLTSLPFQQC 60 Query: 205 KHSITTVDCQ 234 HSI+TVDCQ Sbjct: 61 LHSISTVDCQ 70