BLASTX nr result

ID: Coptis21_contig00010942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010942
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN86569.1| nucleotide binding protein [Cypripedium parviflor...   164   9e-39
gb|AAK26019.1|AF360309_1 putative nucleotide-binding protein [Ar...   163   2e-38
ref|NP_568748.1| nucleotide binding protein 35 [Arabidopsis thal...   163   2e-38
dbj|BAB08742.1| nucleotide-binding protein [Arabidopsis thaliana]     163   2e-38
ref|XP_003589206.1| Cytosolic Fe-S cluster assembly factor nbp35...   161   6e-38

>gb|AAN86569.1| nucleotide binding protein [Cypripedium parviflorum var. pubescens]
          Length = 352

 Score =  164 bits (414), Expect = 9e-39
 Identities = 79/87 (90%), Positives = 83/87 (95%), Gaps = 1/87 (1%)
 Frame = +3

Query: 99  MENGN-EIPEDANEHCPGPQSESAGKSESCEGCPNQNVCATAPKGPDPDLVEIAERMATV 275
           MENGN EIPE+A EHCPGPQSESAGKS+SCEGCPNQ +CATAPKGPDPDLV IAERMAT+
Sbjct: 1   MENGNHEIPENAREHCPGPQSESAGKSDSCEGCPNQQICATAPKGPDPDLVGIAERMATI 60

Query: 276 KHKILVLSGKGGVGKSTFSAQLSFALA 356
           KHKILVLSGKGGVGKSTFSAQLSFALA
Sbjct: 61  KHKILVLSGKGGVGKSTFSAQLSFALA 87


>gb|AAK26019.1|AF360309_1 putative nucleotide-binding protein [Arabidopsis thaliana]
          Length = 350

 Score =  163 bits (412), Expect = 2e-38
 Identities = 79/87 (90%), Positives = 82/87 (94%)
 Frame = +3

Query: 99  MENGNEIPEDANEHCPGPQSESAGKSESCEGCPNQNVCATAPKGPDPDLVEIAERMATVK 278
           MENG +IPEDANEHCPGPQSESAGKS+SC GCPNQ  CATAPKGPDPDLV IAERM+TVK
Sbjct: 1   MENG-DIPEDANEHCPGPQSESAGKSDSCAGCPNQEACATAPKGPDPDLVAIAERMSTVK 59

Query: 279 HKILVLSGKGGVGKSTFSAQLSFALAG 359
           HKILVLSGKGGVGKSTFSAQLSFALAG
Sbjct: 60  HKILVLSGKGGVGKSTFSAQLSFALAG 86


>ref|NP_568748.1| nucleotide binding protein 35 [Arabidopsis thaliana]
           gi|23297101|gb|AAN13093.1| nucleotide-binding protein
           [Arabidopsis thaliana] gi|332008634|gb|AED96017.1|
           nucleotide binding protein 35 [Arabidopsis thaliana]
          Length = 350

 Score =  163 bits (412), Expect = 2e-38
 Identities = 79/87 (90%), Positives = 82/87 (94%)
 Frame = +3

Query: 99  MENGNEIPEDANEHCPGPQSESAGKSESCEGCPNQNVCATAPKGPDPDLVEIAERMATVK 278
           MENG +IPEDANEHCPGPQSESAGKS+SC GCPNQ  CATAPKGPDPDLV IAERM+TVK
Sbjct: 1   MENG-DIPEDANEHCPGPQSESAGKSDSCAGCPNQEACATAPKGPDPDLVAIAERMSTVK 59

Query: 279 HKILVLSGKGGVGKSTFSAQLSFALAG 359
           HKILVLSGKGGVGKSTFSAQLSFALAG
Sbjct: 60  HKILVLSGKGGVGKSTFSAQLSFALAG 86


>dbj|BAB08742.1| nucleotide-binding protein [Arabidopsis thaliana]
          Length = 317

 Score =  163 bits (412), Expect = 2e-38
 Identities = 79/87 (90%), Positives = 82/87 (94%)
 Frame = +3

Query: 99  MENGNEIPEDANEHCPGPQSESAGKSESCEGCPNQNVCATAPKGPDPDLVEIAERMATVK 278
           MENG +IPEDANEHCPGPQSESAGKS+SC GCPNQ  CATAPKGPDPDLV IAERM+TVK
Sbjct: 1   MENG-DIPEDANEHCPGPQSESAGKSDSCAGCPNQEACATAPKGPDPDLVAIAERMSTVK 59

Query: 279 HKILVLSGKGGVGKSTFSAQLSFALAG 359
           HKILVLSGKGGVGKSTFSAQLSFALAG
Sbjct: 60  HKILVLSGKGGVGKSTFSAQLSFALAG 86


>ref|XP_003589206.1| Cytosolic Fe-S cluster assembly factor nbp35 [Medicago truncatula]
           gi|355478254|gb|AES59457.1| Cytosolic Fe-S cluster
           assembly factor nbp35 [Medicago truncatula]
           gi|388520137|gb|AFK48130.1| unknown [Medicago
           truncatula]
          Length = 355

 Score =  161 bits (407), Expect = 6e-38
 Identities = 76/86 (88%), Positives = 83/86 (96%)
 Frame = +3

Query: 99  MENGNEIPEDANEHCPGPQSESAGKSESCEGCPNQNVCATAPKGPDPDLVEIAERMATVK 278
           MENG +IPEDANEHCPGPQS+SAGKS++CEGCPNQ +CATAPKGPDPD+V IAERMATVK
Sbjct: 1   MENG-DIPEDANEHCPGPQSDSAGKSDACEGCPNQQICATAPKGPDPDMVAIAERMATVK 59

Query: 279 HKILVLSGKGGVGKSTFSAQLSFALA 356
           HKILVLSGKGGVGKSTFSAQL+FALA
Sbjct: 60  HKILVLSGKGGVGKSTFSAQLAFALA 85


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