BLASTX nr result
ID: Coptis21_contig00010930
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00010930 (893 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ... 124 3e-26 ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2... 123 5e-26 emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera] 121 2e-25 ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ... 116 6e-24 emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera] 99 1e-18 >ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera] Length = 389 Score = 124 bits (311), Expect = 3e-26 Identities = 76/189 (40%), Positives = 106/189 (56%), Gaps = 8/189 (4%) Frame = -3 Query: 876 LAFWRPGDKAWTSLDSKYTVAMDIIYFKEQFYVVTHFGEVLAFDVNHPFPKVSVITPRPR 697 LA R D +WT L+ + A D+I+ + FY V +G + DV+ P+VS+I P+ Sbjct: 189 LALCRKSDDSWTFLEDAQSYAEDVIFHRGLFYAVNKYGSIAVCDVSGSSPRVSIIE-MPQ 247 Query: 696 DLSLHCEFKYIVVSSGDLLQVSRRRDLT-----DETHF---TRSFELFKLDITRAEWVEV 541 + +Y+V S +LL V+R DLT D+T T F++ +LD+ W V Sbjct: 248 QFG--GDLQYLVESGEELLLVTRYLDLTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVV 305 Query: 540 KTLDGNILFLGDNTSISLSASDFPECKPNSIYFTDDYQEAYMERVYDGGSDGIGPHDIGV 361 +L LFLG+N S+SLS+ DFP CK N IY+TDDY E YDG G D+G+ Sbjct: 306 SSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDN----YDGIG---GEQDLGI 358 Query: 360 FNLEDGSIQ 334 FNLEDGSI+ Sbjct: 359 FNLEDGSIE 367 >ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1| predicted protein [Populus trichocarpa] Length = 393 Score = 123 bits (309), Expect = 5e-26 Identities = 74/186 (39%), Positives = 106/186 (56%), Gaps = 5/186 (2%) Frame = -3 Query: 876 LAFWRPGDKAWTSLDSKYTVAMDIIYFKEQFYVVTHFGEVLAFDVNHPFPKVSVI-TPRP 700 LA+ + GD+ W +++ + + D+IYF FY V G+++ DVN PKVS I TPR Sbjct: 193 LAYCKNGDECWNIVENSRSFSEDVIYFNGLFYAVNKAGQIVVCDVNGNSPKVSFIETPR- 251 Query: 699 RDLSLHCEFKYIVVSSGDLLQVSRRRDLTDE----THFTRSFELFKLDITRAEWVEVKTL 532 + + +Y+V S LL V+R DL E + T FE+FKLD+ W V +L Sbjct: 252 ---QIGGDMQYLVSSGDGLLLVTRYLDLDVEFDIFIYKTARFEVFKLDLNGPRWERVTSL 308 Query: 531 DGNILFLGDNTSISLSASDFPECKPNSIYFTDDYQEAYMERVYDGGSDGIGPHDIGVFNL 352 +LF+G+N+S++LSAS C + IY+TDDY YDG IG HD+G+F L Sbjct: 309 GDMMLFIGENSSLALSASGLSGCMGDCIYYTDDYS----ANNYDG---HIGEHDLGIFKL 361 Query: 351 EDGSIQ 334 DGSI+ Sbjct: 362 SDGSIE 367 >emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera] Length = 389 Score = 121 bits (304), Expect = 2e-25 Identities = 75/189 (39%), Positives = 105/189 (55%), Gaps = 8/189 (4%) Frame = -3 Query: 876 LAFWRPGDKAWTSLDSKYTVAMDIIYFKEQFYVVTHFGEVLAFDVNHPFPKVSVITPRPR 697 LA R D +WT L+ + + D+I+ + FY V +G + DV+ P+VS+I P+ Sbjct: 189 LALCRKSDDSWTFLEDAQSYSEDVIFHRGLFYAVNKYGSIAVCDVSGSSPRVSIIE-MPQ 247 Query: 696 DLSLHCEFKYIVVSSGDLLQVSRRRDLT-----DETHF---TRSFELFKLDITRAEWVEV 541 + +Y+V S +LL V+R DLT D+T T F++ +LD W V Sbjct: 248 QFG--GDLQYLVESGEELLLVTRYLDLTYDVEXDQTSLIYRTTRFQVCRLDSKAPRWEVV 305 Query: 540 KTLDGNILFLGDNTSISLSASDFPECKPNSIYFTDDYQEAYMERVYDGGSDGIGPHDIGV 361 +L LFLG+N S+SLS+ DFP CK N IY+TDDY E YDG G D+G+ Sbjct: 306 SSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDN----YDGIG---GEQDLGI 358 Query: 360 FNLEDGSIQ 334 FNLEDGSI+ Sbjct: 359 FNLEDGSIE 367 >ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis] gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase, putative [Ricinus communis] Length = 398 Score = 116 bits (291), Expect = 6e-24 Identities = 70/192 (36%), Positives = 108/192 (56%), Gaps = 11/192 (5%) Frame = -3 Query: 876 LAFWRPGDKAWTSLDSKYTVAMDIIYFKEQFYVVTHFGEVLAFDVNHPFPKVSVI-TPRP 700 LA+ R GDK+W+ +++ + D+I+ FY V G+++ D++ P+VS + TPR Sbjct: 192 LAYCRNGDKSWSLVENARSFCEDVIFVNGMFYAVNKAGQIVICDISSDSPRVSFMETPRQ 251 Query: 699 RDLSLHCEFKYIVVSSGDLLQVSRRRDLTDE----------THFTRSFELFKLDITRAEW 550 + +Y+V S +LL V+R DL E + T FE+F+LD +W Sbjct: 252 AG----GDMQYLVNSGDELLLVTRYLDLEYEFDHPDMEPHLIYRTIRFEVFRLDWNGPQW 307 Query: 549 VEVKTLDGNILFLGDNTSISLSASDFPECKPNSIYFTDDYQEAYMERVYDGGSDGIGPHD 370 + + TL LF+G+N+S+SLSA+DF C N IY+TDDY +A YDG G HD Sbjct: 308 LRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDDYLDAN----YDG---HFGDHD 360 Query: 369 IGVFNLEDGSIQ 334 +G+F L D +I+ Sbjct: 361 LGIFKLCDETIE 372 >emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera] Length = 394 Score = 99.0 bits (245), Expect = 1e-18 Identities = 64/203 (31%), Positives = 97/203 (47%), Gaps = 27/203 (13%) Frame = -3 Query: 876 LAFWRPGDKAWTSLDSKYTVAMDIIYFKEQFYVVTHFGEVLAFDVNHPFPKVSVITPRPR 697 LAF +PGDK W +L S+ D++Y+K+ FY + +V+ D+ P+V P+ Sbjct: 175 LAFCKPGDKRWITLKSEDIQYKDLLYYKDNFYAIGR-SKVVQCDIGDD-PRVIPFALLPK 232 Query: 696 DLSLHCEFKYIVVSSGDLLQVSRRRDLTDET---------------------------HF 598 + +++Y+V SSG LL V R DL D + Sbjct: 233 --MGYFQYRYLVESSGCLLYVLRYMDLKDNEDPLKLRYETTGFKVFDLDSDKRKFSYRYE 290 Query: 597 TRSFELFKLDITRAEWVEVKTLDGNILFLGDNTSISLSASDFPECKPNSIYFTDDYQEAY 418 T +F+++ D + +W +K + L LG N +IS+S F K N IYF DDY+E Y Sbjct: 291 TTTFKVYNFDFDQKKWKLIKNIKEKALLLGHNQAISISTKKFDGFKSNHIYFLDDYKEGY 350 Query: 417 MERVYDGGSDGIGPHDIGVFNLE 349 E Y G HD+GVFN++ Sbjct: 351 FENTY-------GCHDMGVFNIK 366