BLASTX nr result

ID: Coptis21_contig00010909 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010909
         (1479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283244.1| PREDICTED: G-box-binding factor 1 [Vitis vin...   296   1e-77
ref|XP_002272761.1| PREDICTED: G-box-binding factor 1 [Vitis vin...   289   1e-75
ref|XP_004143501.1| PREDICTED: G-box-binding factor 1-like [Cucu...   276   1e-71
ref|XP_002525106.1| G-box-binding factor, putative [Ricinus comm...   275   2e-71
gb|ABK96172.1| unknown [Populus trichocarpa]                          274   4e-71

>ref|XP_002283244.1| PREDICTED: G-box-binding factor 1 [Vitis vinifera]
            gi|302142457|emb|CBI19660.3| unnamed protein product
            [Vitis vinifera]
          Length = 398

 Score =  296 bits (757), Expect = 1e-77
 Identities = 177/378 (46%), Positives = 214/378 (56%), Gaps = 14/378 (3%)
 Frame = +3

Query: 105  MGSGEETTPAAKPSGPTASSQETPTTSAYPDWPGPMQAYYGAGATQPPFFAPTVASPTPY 284
            MG GEE+TP  K S P AS+QETP+T +YPDW   MQAYYGAGAT PPFF   VA P+P+
Sbjct: 1    MGDGEESTPP-KSSKPPASTQETPSTPSYPDWSTSMQAYYGAGATPPPFFPSPVAPPSPH 59

Query: 285  PYMWGGQH-LVSPYGTPIPYPALYPHAGLYPHPNMATAQGAPVTTG----KTEGKETPAK 449
            PY+WGGQH ++ PYGTP+PYPALYP   LY HP+MATAQG  +T      KT   + PA 
Sbjct: 60   PYLWGGQHPMMPPYGTPLPYPALYPRGALYAHPSMATAQGVALTNTDMEVKTPDGKDPAS 119

Query: 450  KVKS---SENIGLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNISRKDILANK 620
              KS   S N+GL+                                     + +   A K
Sbjct: 120  IKKSKAASGNMGLISGKSGESGKAASVSGNDGASQSGESGSEASSDATDENANQASSAVK 179

Query: 621  NRSFDKMLEDGANAHNPAHHNSLNGKGEPSANLPIPLPGNPAGDLAATNLNIGMDLWSAS 800
             RSF+  L DG+NA   +      G    S      +PG P   +  T+LNIGMDLW+AS
Sbjct: 180  KRSFN--LADGSNAKGNSAAQYTGGNHSAS------VPGKPVVPMPTTSLNIGMDLWNAS 231

Query: 801  HVGAMPSRVRPNASGVLPAA------GHEGMVPDHLFGQDEREMKRQRRKLSNRESARRS 962
              G  P + RP +SG  P        G EGM+ DH + QDERE+KRQRRK SNRESARRS
Sbjct: 232  PAGGTPMKTRPQSSGASPQVASATIVGREGMLQDHQWIQDERELKRQRRKQSNRESARRS 291

Query: 963  RLRKQAECEELQVKVENLSNENQNXXXXXXXXXXXXXXXTNDNASLLGELTQLYGEDAVS 1142
            RLRKQAECEELQ KVE LSNEN                 T++N S++ ELTQLYG +A S
Sbjct: 292  RLRKQAECEELQSKVEILSNENHVLREELHRLAEQCEKLTSENNSIMEELTQLYGPEATS 351

Query: 1143 RLKVMNGNTSLSPSVNGD 1196
             L+  N N  L P +NG+
Sbjct: 352  SLQDNNHNLVLHP-INGE 368


>ref|XP_002272761.1| PREDICTED: G-box-binding factor 1 [Vitis vinifera]
            gi|297735196|emb|CBI17558.3| unnamed protein product
            [Vitis vinifera]
          Length = 364

 Score =  289 bits (739), Expect = 1e-75
 Identities = 177/377 (46%), Positives = 218/377 (57%), Gaps = 13/377 (3%)
 Frame = +3

Query: 105  MGSGEETTPAAKPSGPTASSQETPTTSAYPDWPGPMQAYYGAGATQPPFFAPTVASPTPY 284
            MG+GE+TTP  KPS PT+S+QE PTT +YP+W   MQAYYG GAT PPFFAP+VASPTP+
Sbjct: 1    MGAGEDTTPT-KPSKPTSSAQEMPTTPSYPEWSSSMQAYYGPGATPPPFFAPSVASPTPH 59

Query: 285  PYMWGGQH-LVSPYGTPIPYPALYPHAGLYPHPNMATAQGA----PVTTGK-TEGKETPA 446
            PY+WG QH L+ PYGTP+PY ALYP  G+Y HPN+ATA  A    P   GK  EGK+  +
Sbjct: 60   PYLWGSQHPLIPPYGTPVPYSALYPPGGVYAHPNLATAPSAAHLNPELEGKGPEGKDKAS 119

Query: 447  KKVKSSENIGLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNISRKDILANKNR 626
             K KS    G                                     N ++++  ++K  
Sbjct: 120  AK-KSKGTSGNTVKGGESGKAASGSGNDGASPSAESGSEGSSDASDENTNQQEFASSKKG 178

Query: 627  SFDKMLEDGANAHNPAHHNSLNGKGEPSANLPIPLPGNPAGDLAATNLNIGMDLWSASHV 806
            SF++ML D ANA N     S+             +PG P   + ATNLNIGMDLWSAS  
Sbjct: 179  SFNQMLAD-ANAQNNISGTSVQAS----------VPGKPVISMPATNLNIGMDLWSASPG 227

Query: 807  GAMPSRVRPNASG----VLPAA--GHEGMVPDHLFGQDEREMKRQRRKLSNRESARRSRL 968
            G+  +++RPN SG    V PAA  G EG++PD    QDERE+KRQ+RK SNRESARRSRL
Sbjct: 228  GSGATKLRPNPSGISSSVAPAAMVGREGVMPDQWI-QDERELKRQKRKQSNRESARRSRL 286

Query: 969  RKQAECEELQVKVENLSNENQNXXXXXXXXXXXXXXXTNDNASLLGELTQLYGEDAV-SR 1145
            RKQAECEELQ KVE LS EN                 T++N S+  ELT++ G DAV + 
Sbjct: 287  RKQAECEELQAKVETLSTENTALRDELQRLSEECEKLTSENNSIKEELTRVCGADAVAAN 346

Query: 1146 LKVMNGNTSLSPSVNGD 1196
            LK  N     S  V G+
Sbjct: 347  LKEKNPTQLQSQGVEGN 363


>ref|XP_004143501.1| PREDICTED: G-box-binding factor 1-like [Cucumis sativus]
            gi|449530949|ref|XP_004172454.1| PREDICTED: G-box-binding
            factor 1-like [Cucumis sativus]
          Length = 377

 Score =  276 bits (705), Expect = 1e-71
 Identities = 157/370 (42%), Positives = 212/370 (57%), Gaps = 12/370 (3%)
 Frame = +3

Query: 87   FFLLISMGSGEETTPAAKPSGPTASSQETPTTSAYPDWPGPMQAYYGAGATQPPFFAPTV 266
            +F L  MG+GEE TP+ K S P +SSQE   T +YPDW   +QAYYGAGAT PPFFA TV
Sbjct: 6    WFQLWLMGTGEEGTPS-KTSKPPSSSQEIAPTPSYPDWSSSVQAYYGAGATPPPFFASTV 64

Query: 267  ASPTPYPYMWGGQH-LVSPYGTPIPYPALYPHAGLYPHPNMATAQGAPVTTGKTEGKETP 443
            ASPTP+PY+WGGQH L+SPYGTP+PYPA+YP  G+Y HPN+    G+     + EGK   
Sbjct: 65   ASPTPHPYLWGGQHPLMSPYGTPVPYPAIYPPGGVYAHPNITVTPGSVPINAEYEGKSPD 124

Query: 444  AKKVKSSENIGLV-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNISRK 602
             K+  S ++ G+                                           N +++
Sbjct: 125  GKERVSKKSKGMSGNTASGGGRTGESGKVASSSGNDGASQSAESGTEGSSEGSDENGNQQ 184

Query: 603  DILANKNRSFDKMLEDGANAHNPAHHNSLNGKGEPSANLPIPLPGNPAGDLAATNLNIGM 782
            +  ANK  SF++ML DGANA         N  G P+A   +   G P  ++  TNLN+GM
Sbjct: 185  EFAANKKGSFNQMLADGANAQ--------NNTGGPNAKSSV--TGKPIANIPGTNLNMGM 234

Query: 783  DLWSASHVGAMPSRVRPNASG----VLPAAGHEGMVPDHLFGQDEREMKRQRRKLSNRES 950
            DLW+ ++ G+   +VR NA       +P  G +GM+P+  + QDERE+KRQ+RK SNRES
Sbjct: 235  DLWNTTNAGSGAGKVRGNAVSSAIVTVPMVGRDGMMPEQ-WVQDERELKRQKRKQSNRES 293

Query: 951  ARRSRLRKQAECEELQVKVENLSNENQNXXXXXXXXXXXXXXXTNDNASLLGELTQLYGE 1130
            ARRSRLRKQAECEELQ +V+ L+NEN+                T++N+S+  ELT+  G 
Sbjct: 294  ARRSRLRKQAECEELQARVQTLNNENRTLRDELQRLSEECEKLTSENSSIKEELTRFCGP 353

Query: 1131 DAVSRLKVMN 1160
            +A++  +  N
Sbjct: 354  EALANFEKGN 363


>ref|XP_002525106.1| G-box-binding factor, putative [Ricinus communis]
            gi|223535565|gb|EEF37233.1| G-box-binding factor,
            putative [Ricinus communis]
          Length = 350

 Score =  275 bits (703), Expect = 2e-71
 Identities = 171/360 (47%), Positives = 208/360 (57%), Gaps = 8/360 (2%)
 Frame = +3

Query: 105  MGSGEETTPAAKPSGPTASSQETPTTSAYPDWPGPMQAYYGAGATQPPFFAPTVASPTPY 284
            MG+GEE+TPA KPS P+ S+QE P T AYPDW   MQAYYGAGAT PPFFA TV SPTP+
Sbjct: 1    MGTGEESTPA-KPSKPS-SAQEIPPTPAYPDWSNSMQAYYGAGAT-PPFFASTVPSPTPH 57

Query: 285  PYMWGGQH-LVSPYGTPIPYPALYPHAGLYPHPNMATAQGAPVTTGKTEGKETPAKK--- 452
            PY+WGGQH L+ PYGTP+PYPALYP  G+Y HPNMAT         + EGK    ++   
Sbjct: 58   PYLWGGQHPLMPPYGTPVPYPALYPAGGVYAHPNMATPPNPAQANTEYEGKGPDGREKAS 117

Query: 453  VKSSENIGLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNISRKDILANKNRSF 632
            VK S+   +V                                   N + +D  ANK  SF
Sbjct: 118  VKKSKG-NVVGKAGESAKATSGSGNDGASQSAESGSDGSSDASDENNNHQDFAANKKGSF 176

Query: 633  DKMLEDGANAHNPAHHNSLNGKGEPSANLPIPLPGNPAGDLAATNLNIGMDLWSASHVGA 812
            D+ML D ANA N       N  G         +PG P   + ATNLNIGMDLW+AS   A
Sbjct: 177  DQMLAD-ANAQN-------NTAG-------ASVPGKPVVSMPATNLNIGMDLWNASPAAA 221

Query: 813  M-PSRVRPNASGVLPAAGHEGMVP---DHLFGQDEREMKRQRRKLSNRESARRSRLRKQA 980
               +++RPNASG     G  G+VP      + QDERE+KRQ+RK SNRESARRSRLRKQA
Sbjct: 222  PGATKIRPNASG-----GSSGIVPAIMPEQWIQDERELKRQKRKQSNRESARRSRLRKQA 276

Query: 981  ECEELQVKVENLSNENQNXXXXXXXXXXXXXXXTNDNASLLGELTQLYGEDAVSRLKVMN 1160
            ECEELQ +VE L+ +N+N                ++N S+  ELT+LYG DAV+ L+  N
Sbjct: 277  ECEELQARVETLTTDNRNLRDELQRLSEECDKLKSENDSIKEELTRLYGPDAVANLEQSN 336


>gb|ABK96172.1| unknown [Populus trichocarpa]
          Length = 354

 Score =  274 bits (701), Expect = 4e-71
 Identities = 166/376 (44%), Positives = 213/376 (56%), Gaps = 11/376 (2%)
 Frame = +3

Query: 105  MGSGEETTPAAKPSGPTASSQETPTTSAYPDWPGPMQAYYGAGATQPPFFAPTVASPTPY 284
            MG+GEE+TPA KPS PT+S+QE PTT  YPDW   MQAYYGAGAT PPF+A TVASP  +
Sbjct: 1    MGTGEESTPA-KPSKPTSSNQEIPTTPLYPDWSSSMQAYYGAGATPPPFYASTVASPASH 59

Query: 285  PYMWGGQH-LVSPYGTPIPYPALYPHAGLYPHPNMATAQGAPVTTGKTEGK------ETP 443
            PY+WG QH L+ PYGTP+PYPALYP  G+Y HPNMA    +     + EGK         
Sbjct: 60   PYLWGSQHPLIPPYGTPVPYPALYPAGGVYAHPNMAPTPNSAQANIEMEGKVPNGKDRAS 119

Query: 444  AKKVKSSENIGLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNISRKDILANKN 623
            AKK K +                                         N ++++  A+K 
Sbjct: 120  AKKTKGTSG----GKAGESGKAASGSGNDGASQSAESGSDGSSDASDENTNQQEYGASKK 175

Query: 624  RSFDKMLEDGANAHNPAHHNSLNGKGEPSANLPIPLPGNPAGDLAATNLNIGMDLWSASH 803
             SF++ML D ANA + +            AN+   +PG P   + ATNLNIGMDLW+AS 
Sbjct: 176  GSFNQMLAD-ANAQSTS----------AGANIQASVPGKPVASMPATNLNIGMDLWNASS 224

Query: 804  VGAMPSRVRPN----ASGVLPAAGHEGMVPDHLFGQDEREMKRQRRKLSNRESARRSRLR 971
              A  +++RPN     SGV+PA   E  +      QDERE+KRQ+RK SNRESARRSRLR
Sbjct: 225  -AAGATKMRPNPSCATSGVVPAGLPEQWI------QDERELKRQKRKQSNRESARRSRLR 277

Query: 972  KQAECEELQVKVENLSNENQNXXXXXXXXXXXXXXXTNDNASLLGELTQLYGEDAVSRLK 1151
            KQAECEELQ +V+NLS++N N                ++N S+  ELT+LYG + V++L+
Sbjct: 278  KQAECEELQARVQNLSSDNSNLRNELQSLSEECNKLKSENDSIKEELTRLYGPEVVAKLE 337

Query: 1152 VMNGNTSLSPSVNGDG 1199
              N   S+  S  G+G
Sbjct: 338  QSN-PASVPESHGGEG 352


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