BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010908
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17913.3| unnamed protein product [Vitis vinifera]              211   6e-53
ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]     211   6e-53
ref|XP_004165348.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 4...   205   3e-51
ref|XP_004149513.1| PREDICTED: DNA ligase 4-like [Cucumis sativus]    205   3e-51
ref|XP_003546435.1| PREDICTED: DNA ligase 4-like [Glycine max]        204   6e-51

>emb|CBI17913.3| unnamed protein product [Vitis vinifera]
          Length = 1163

 Score =  211 bits (536), Expect = 6e-53
 Identities = 104/130 (80%), Positives = 113/130 (86%), Gaps = 1/130 (0%)
 Frame = +3

Query: 3   GKWLKLKPDYIRAGSDLDVLIIXXXXXXXXXXXEVAQFLVGLAERSAPNIYPRRFISFCR 182
           GKWLKLKP+Y+ AGSDLDVLII           EVAQFLVGLA+ S P+ YPRRFISFCR
Sbjct: 436 GKWLKLKPEYVHAGSDLDVLIIGGYYGSGRRGGEVAQFLVGLADHSGPDTYPRRFISFCR 495

Query: 183 VGTGLSDDELDALVTKLKPYFRKNEYPKRT-PSFYEVTNNSKERPDVWIESPEKSIILSI 359
           VGTGLSDDELDA+VTKLKPYFRKNEYPK+  PSFY+VTNNSKERPD+WI+SPEKSIILSI
Sbjct: 496 VGTGLSDDELDAVVTKLKPYFRKNEYPKKAPPSFYQVTNNSKERPDIWIDSPEKSIILSI 555

Query: 360 TSDIRTIRSE 389
           TSDIRTIRSE
Sbjct: 556 TSDIRTIRSE 565


>ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]
          Length = 1162

 Score =  211 bits (536), Expect = 6e-53
 Identities = 104/130 (80%), Positives = 113/130 (86%), Gaps = 1/130 (0%)
 Frame = +3

Query: 3   GKWLKLKPDYIRAGSDLDVLIIXXXXXXXXXXXEVAQFLVGLAERSAPNIYPRRFISFCR 182
           GKWLKLKP+Y+ AGSDLDVLII           EVAQFLVGLA+ S P+ YPRRFISFCR
Sbjct: 435 GKWLKLKPEYVHAGSDLDVLIIGGYYGSGRRGGEVAQFLVGLADHSGPDTYPRRFISFCR 494

Query: 183 VGTGLSDDELDALVTKLKPYFRKNEYPKRT-PSFYEVTNNSKERPDVWIESPEKSIILSI 359
           VGTGLSDDELDA+VTKLKPYFRKNEYPK+  PSFY+VTNNSKERPD+WI+SPEKSIILSI
Sbjct: 495 VGTGLSDDELDAVVTKLKPYFRKNEYPKKAPPSFYQVTNNSKERPDIWIDSPEKSIILSI 554

Query: 360 TSDIRTIRSE 389
           TSDIRTIRSE
Sbjct: 555 TSDIRTIRSE 564


>ref|XP_004165348.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 4-like, partial [Cucumis
           sativus]
          Length = 918

 Score =  205 bits (522), Expect = 3e-51
 Identities = 101/130 (77%), Positives = 112/130 (86%), Gaps = 1/130 (0%)
 Frame = +3

Query: 3   GKWLKLKPDYIRAGSDLDVLIIXXXXXXXXXXXEVAQFLVGLAERSAPNIYPRRFISFCR 182
           GKWLKLKPDY+RAGSDLD LII           EVAQFL+GLAER   N YPRRF+SFCR
Sbjct: 138 GKWLKLKPDYVRAGSDLDALIIGGYYGSGRRGGEVAQFLMGLAERPPSNAYPRRFVSFCR 197

Query: 183 VGTGLSDDELDALVTKLKPYFRKNEYPKRT-PSFYEVTNNSKERPDVWIESPEKSIILSI 359
           VGTGL+D+ELDA+V KLKPYFRK+EYP++T PSFY+VTNNSKERPDVWIESPEKSIILSI
Sbjct: 198 VGTGLTDEELDAVVNKLKPYFRKSEYPRKTAPSFYQVTNNSKERPDVWIESPEKSIILSI 257

Query: 360 TSDIRTIRSE 389
           TSDIRTI+SE
Sbjct: 258 TSDIRTIKSE 267


>ref|XP_004149513.1| PREDICTED: DNA ligase 4-like [Cucumis sativus]
          Length = 1214

 Score =  205 bits (522), Expect = 3e-51
 Identities = 101/130 (77%), Positives = 112/130 (86%), Gaps = 1/130 (0%)
 Frame = +3

Query: 3   GKWLKLKPDYIRAGSDLDVLIIXXXXXXXXXXXEVAQFLVGLAERSAPNIYPRRFISFCR 182
           GKWLKLKPDY+RAGSDLD LII           EVAQFL+GLAER   N YPRRF+SFCR
Sbjct: 434 GKWLKLKPDYVRAGSDLDALIIGGYYGSGRRGGEVAQFLMGLAERPPSNAYPRRFVSFCR 493

Query: 183 VGTGLSDDELDALVTKLKPYFRKNEYPKRT-PSFYEVTNNSKERPDVWIESPEKSIILSI 359
           VGTGL+D+ELDA+V KLKPYFRK+EYP++T PSFY+VTNNSKERPDVWIESPEKSIILSI
Sbjct: 494 VGTGLTDEELDAVVNKLKPYFRKSEYPRKTAPSFYQVTNNSKERPDVWIESPEKSIILSI 553

Query: 360 TSDIRTIRSE 389
           TSDIRTI+SE
Sbjct: 554 TSDIRTIKSE 563


>ref|XP_003546435.1| PREDICTED: DNA ligase 4-like [Glycine max]
          Length = 1171

 Score =  204 bits (519), Expect = 6e-51
 Identities = 102/130 (78%), Positives = 113/130 (86%), Gaps = 1/130 (0%)
 Frame = +3

Query: 3   GKWLKLKPDYIRAGSDLDVLIIXXXXXXXXXXXEVAQFLVGLAERSAPNIYPRRFISFCR 182
           GKWLKLKP+YI+AGSDLDVLII           EVAQFLVGLAER +PN +P++FISFCR
Sbjct: 435 GKWLKLKPEYIQAGSDLDVLIIGGYYGSGRRGGEVAQFLVGLAERPSPNTHPKQFISFCR 494

Query: 183 VGTGLSDDELDALVTKLKPYFRKNEYP-KRTPSFYEVTNNSKERPDVWIESPEKSIILSI 359
           VGTGLSDDELDA+VTKLKPYFRK EYP KR PSFY+VTN+SKERPDVW++SPEKSIILSI
Sbjct: 495 VGTGLSDDELDAVVTKLKPYFRKYEYPKKRPPSFYQVTNHSKERPDVWVDSPEKSIILSI 554

Query: 360 TSDIRTIRSE 389
           TSDIRTI SE
Sbjct: 555 TSDIRTIESE 564