BLASTX nr result

ID: Coptis21_contig00010904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010904
         (634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522374.1| hypothetical protein RCOM_0603630 [Ricinus c...    88   9e-16
ref|XP_002310176.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-15
ref|XP_004160513.1| PREDICTED: uncharacterized protein LOC101232...    66   6e-09
ref|XP_004142023.1| PREDICTED: uncharacterized protein LOC101222...    66   6e-09
ref|NP_190607.2| uncharacterized protein [Arabidopsis thaliana] ...    62   1e-07

>ref|XP_002522374.1| hypothetical protein RCOM_0603630 [Ricinus communis]
            gi|223538452|gb|EEF40058.1| hypothetical protein
            RCOM_0603630 [Ricinus communis]
          Length = 1720

 Score = 88.2 bits (217), Expect(2) = 9e-16
 Identities = 55/171 (32%), Positives = 91/171 (53%), Gaps = 16/171 (9%)
 Frame = -3

Query: 470  DSSILGAKKEHV-----------DSKVIVWAEPALKSLPVKKAVTDSDNSVRNACFLRLG 324
            D++  G+ K H            DSK ++  EPA   LP++ +  +++    +A    L 
Sbjct: 546  DTATEGSSKHHTVKGNRERMTANDSKTVLQGEPAQIFLPLQNSQKNAEGQDESAHGPFLK 605

Query: 323  SCLEELWLNWKSFHKRLE*NSDQYLENPFLLFELKSFLMDQCLGRADVGLWKCNLSMGRL 144
            + L E+WL W+   K+ + N  +Y ENP+LL E+K+ L+   L   + GLWKCNL++G+L
Sbjct: 606  TFLGEMWLTWRRACKKYDDNEIEYSENPWLLCEIKNCLLHPGLKGPNSGLWKCNLTVGKL 665

Query: 143  YADLGHSFIVSIVLLLRQIQHF-----SHGVASYERMPGLSESPTFIKEPE 6
               LG+  ++S+ +LL Q+QH       +G  S   +P    +PTF  + E
Sbjct: 666  NITLGYLSMISMAILLEQMQHALKWTNDNGRVSVRSIP----TPTFQDQSE 712



 Score = 20.8 bits (42), Expect(2) = 9e-16
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 514 TLSLSCGDFKVNSSLI 467
           + SLSCG  KV +S +
Sbjct: 528 SFSLSCGKLKVKTSSV 543


>ref|XP_002310176.1| predicted protein [Populus trichocarpa] gi|222853079|gb|EEE90626.1|
           predicted protein [Populus trichocarpa]
          Length = 868

 Score = 82.4 bits (202), Expect(2) = 6e-15
 Identities = 47/124 (37%), Positives = 68/124 (54%), Gaps = 1/124 (0%)
 Frame = -3

Query: 449 KKEHVDS-KVIVWAEPALKSLPVKKAVTDSDNSVRNACFLRLGSCLEELWLNWKSFHKRL 273
           +K  VD  K I+  +PA   LP + + T   N     C   L + + E+WL W+      
Sbjct: 559 RKGSVDKLKTILMGKPAQVFLPSQTSETSVANPAEGTCNPYLQTLMGEMWLAWQKSSAGY 618

Query: 272 E*NSDQYLENPFLLFELKSFLMDQCLGRADVGLWKCNLSMGRLYADLGHSFIVSIVLLLR 93
           + N   Y E P+LL E+K+ LMD  L R   G WKC+L+ G+L   LG+S ++S+ +LL 
Sbjct: 619 KDNEIAYSETPWLLCEIKNCLMDPNLKRPVSGFWKCSLTAGKLNLALGYSSVLSLAILLG 678

Query: 92  QIQH 81
           QIQH
Sbjct: 679 QIQH 682



 Score = 23.9 bits (50), Expect(2) = 6e-15
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -1

Query: 514 TLSLSCGDFKVNSSLIV 464
           +LSLSCG  KV SS ++
Sbjct: 523 SLSLSCGKLKVKSSSVM 539


>ref|XP_004160513.1| PREDICTED: uncharacterized protein LOC101232737 [Cucumis sativus]
          Length = 766

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
 Frame = -3

Query: 464 SILGAKKEHVDS-KVIVWAEPALKSLPVKKAVTDSDNSVRNACFLRLGSCLEELWLNWKS 288
           S+ G + E  +S K  +  EPA    P       +   +   C   +   LE +WL WKS
Sbjct: 442 SLEGCEMERANSLKSFIRGEPAQSFFP------SNGREIDTGCNQFIVKYLEGMWLRWKS 495

Query: 287 FHKRLE*NSDQYLENPFLLFELKSFLMDQCLGRADVGLWKCNLSMGRLYADLGHSFIVSI 108
             + LE     Y +NP+ L E+ S +    L  +   +WKCNL++G+L   L +S ++S 
Sbjct: 496 VCRNLEEGMIPYSDNPWFLCEISSSMTKSVLENSSTSIWKCNLALGKLNFALQYSSVLSA 555

Query: 107 VLLLR 93
            LLL+
Sbjct: 556 ALLLQ 560


>ref|XP_004142023.1| PREDICTED: uncharacterized protein LOC101222087 [Cucumis sativus]
          Length = 3608

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
 Frame = -3

Query: 464 SILGAKKEHVDS-KVIVWAEPALKSLPVKKAVTDSDNSVRNACFLRLGSCLEELWLNWKS 288
           S+ G + E  +S K  +  EPA    P       +   +   C   +   LE +WL WKS
Sbjct: 549 SLEGCEMERANSLKSFIRGEPAQSFFP------SNGREIDTGCNQFIVKYLEGMWLRWKS 602

Query: 287 FHKRLE*NSDQYLENPFLLFELKSFLMDQCLGRADVGLWKCNLSMGRLYADLGHSFIVSI 108
             + LE     Y +NP+ L E+ S +    L  +   +WKCNL++G+L   L +S ++S 
Sbjct: 603 VCRNLEEGMIPYSDNPWFLCEISSSMTKSVLENSSTSIWKCNLALGKLNFALQYSSVLSA 662

Query: 107 VLLLR 93
            LLL+
Sbjct: 663 ALLLQ 667


>ref|NP_190607.2| uncharacterized protein [Arabidopsis thaliana]
           gi|332645140|gb|AEE78661.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 3072

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 40/130 (30%), Positives = 71/130 (54%), Gaps = 2/130 (1%)
 Frame = -3

Query: 467 SSILGAKKEHV--DSKVIVWAEPALKSLPVKKAVTDSDNSVRNACFLRLGSCLEELWLNW 294
           SS     K+H+  D K I+  +PA +   + K V ++  S ++   L L + L E+WLNW
Sbjct: 555 SSSSEGNKKHMREDVKTILDMDPAQQ---ISKTV-NNHGSDQHEGMLHLQNLLREMWLNW 610

Query: 293 KSFHKRLE*NSDQYLENPFLLFELKSFLMDQCLGRADVGLWKCNLSMGRLYADLGHSFIV 114
            S   +L+ ++    + P LL ++KS +  + +G  D   WKC++ +G+L     +S + 
Sbjct: 611 NSNCMKLDKSTFTISDKPCLLVDIKSCMAYEVVGNQDSEFWKCSMVLGKLDIVFEYSSLF 670

Query: 113 SIVLLLRQIQ 84
           S+ LL+ QI+
Sbjct: 671 SLALLIWQIE 680


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