BLASTX nr result

ID: Coptis21_contig00010902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010902
         (1041 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283927.2| PREDICTED: transport inhibitor response 1-li...   458   e-126
ref|XP_002302328.1| f-box family protein [Populus trichocarpa] g...   438   e-121
ref|XP_002306554.1| f-box family protein [Populus trichocarpa] g...   438   e-120
ref|XP_002514006.1| TRANSPORT INHIBITOR RESPONSE 1 protein, puta...   435   e-119
ref|XP_004160292.1| PREDICTED: transport inhibitor response 1-li...   432   e-119

>ref|XP_002283927.2| PREDICTED: transport inhibitor response 1-like protein [Vitis
            vinifera] gi|147845617|emb|CAN80598.1| hypothetical
            protein VITISV_002642 [Vitis vinifera]
          Length = 601

 Score =  458 bits (1178), Expect = e-126
 Identities = 223/326 (68%), Positives = 265/326 (81%)
 Frame = +1

Query: 61   EEVLDNILHFLPTRHHRNSFSLVCKTWYKADTLTRYELFIGNCYSISPQRAIQRFGNIKS 240
            E VL+N+L FL +R  RN+ SLVCK+WY+A+ LTR +LFIGNCY++SP+RAI+RF  ++S
Sbjct: 38   ENVLENVLLFLTSRRDRNAVSLVCKSWYRAEALTRSDLFIGNCYAVSPRRAIERFRRVRS 97

Query: 241  LVLKGKPRFADFNLIPVNWGAHFKPWCTSMTSAYPWLEKISLKRMLVTDSDLLLVSNELL 420
            +VLKGKPRFADFNL+P NWGA+F PW T+M ++YPWLEK+ LKRM VTD DL L++    
Sbjct: 98   VVLKGKPRFADFNLMPPNWGAYFTPWVTAMATSYPWLEKVYLKRMFVTDRDLELLAQSFP 157

Query: 421  GFKELVLDFCEGFGTTGLAFIASNCRQLRVLDLIENAVLEDACDWISCFPESETCLECLA 600
             FKELVL  C+GFGT+GLA IAS CRQLRVLDLIE+ V +D  DWISCFPES TCLE L 
Sbjct: 158  AFKELVLVCCDGFGTSGLAGIASKCRQLRVLDLIEDEVTDDEVDWISCFPESGTCLESLI 217

Query: 601  FDCIDTPVNFEALEQLVARSPSLKKLRLNQHVSIEQLWRLMVRAPQLTDLGTGCFVSADP 780
            FDCI+ P+NFEALE+LVARSPSL+KLRLN++VSI QL+RLM+RAPQLT LG+G F S+D 
Sbjct: 218  FDCIECPINFEALERLVARSPSLRKLRLNRYVSIGQLYRLMIRAPQLTHLGSGSFSSSDI 277

Query: 781  MVQVDVQRDLPLAFAACKSLVSLSGFSVIVPEYLCTIYPVCANLISLNFSYTTINTEQLK 960
            + Q D + D   AFAACKSLV LSGF  I+P+YL  IYPVCANL SLNFSY  INTEQLK
Sbjct: 278  VAQGDQEPDYISAFAACKSLVCLSGFREIIPDYLPAIYPVCANLTSLNFSYANINTEQLK 337

Query: 961  SFIRHCHKLQKLWVLDIIGDEGLQAV 1038
            S I HCHKLQ  WVLD + DEGLQAV
Sbjct: 338  SVICHCHKLQIFWVLDSVCDEGLQAV 363


>ref|XP_002302328.1| f-box family protein [Populus trichocarpa]
            gi|222844054|gb|EEE81601.1| f-box family protein [Populus
            trichocarpa]
          Length = 635

 Score =  438 bits (1127), Expect = e-121
 Identities = 212/344 (61%), Positives = 262/344 (76%), Gaps = 4/344 (1%)
 Frame = +1

Query: 19   SGEHATCSSSSSFPEEVLDNILH----FLPTRHHRNSFSLVCKTWYKADTLTRYELFIGN 186
            SG  +    S+ +P++VL+N+L     FL +R  RN+ SLVC+ WY+ + +TR +LFIGN
Sbjct: 53   SGSSSIPEYSAPYPDQVLENVLENVLWFLTSRKDRNAASLVCRLWYRVEAMTRSDLFIGN 112

Query: 187  CYSISPQRAIQRFGNIKSLVLKGKPRFADFNLIPVNWGAHFKPWCTSMTSAYPWLEKISL 366
            CY++SP+RA  RF  I+S+ LKGKPRFADFNL+P NWGAHF PW ++M  AYPWLEKI L
Sbjct: 113  CYAVSPERATSRFTRIRSVTLKGKPRFADFNLMPPNWGAHFAPWVSAMAKAYPWLEKIHL 172

Query: 367  KRMLVTDSDLLLVSNELLGFKELVLDFCEGFGTTGLAFIASNCRQLRVLDLIENAVLEDA 546
            KRM VTD DL L++    GFKEL L  C+GFGT+GLA +AS CRQL+VLDLIE+ V +D 
Sbjct: 173  KRMSVTDDDLALLAESFSGFKELALVCCDGFGTSGLAVVASKCRQLKVLDLIESEVSDDE 232

Query: 547  CDWISCFPESETCLECLAFDCIDTPVNFEALEQLVARSPSLKKLRLNQHVSIEQLWRLMV 726
             DWI CFP++ETCLE L  DC++ P++F+ALE+LV RSPSLKKLRLN+ VSI QL+RLMV
Sbjct: 233  VDWILCFPDTETCLESLILDCVECPIDFDALERLVTRSPSLKKLRLNRFVSIGQLYRLMV 292

Query: 727  RAPQLTDLGTGCFVSADPMVQVDVQRDLPLAFAACKSLVSLSGFSVIVPEYLCTIYPVCA 906
            RAPQLT LGTG F  ++ + Q +++ D   AFAACKSLV LSGF  I+P+YL  IYPVCA
Sbjct: 293  RAPQLTHLGTGSFSQSEDVAQGELELDYGSAFAACKSLVCLSGFREIIPDYLPAIYPVCA 352

Query: 907  NLISLNFSYTTINTEQLKSFIRHCHKLQKLWVLDIIGDEGLQAV 1038
            NL SLNFSY  I+ EQLK  I +CHKLQ  WVLD I DEGLQAV
Sbjct: 353  NLTSLNFSYANISAEQLKPIISNCHKLQTFWVLDSICDEGLQAV 396


>ref|XP_002306554.1| f-box family protein [Populus trichocarpa]
            gi|222856003|gb|EEE93550.1| f-box family protein [Populus
            trichocarpa]
          Length = 635

 Score =  438 bits (1126), Expect = e-120
 Identities = 209/326 (64%), Positives = 256/326 (78%)
 Frame = +1

Query: 61   EEVLDNILHFLPTRHHRNSFSLVCKTWYKADTLTRYELFIGNCYSISPQRAIQRFGNIKS 240
            E VL+N+L FL +R  RN+ SLVC++WY+ + LTR +LFIGNCY++SP+RA+ RF  I+S
Sbjct: 71   ENVLENVLWFLTSRKDRNAASLVCRSWYRVEALTRSDLFIGNCYAVSPKRAMSRFTRIRS 130

Query: 241  LVLKGKPRFADFNLIPVNWGAHFKPWCTSMTSAYPWLEKISLKRMLVTDSDLLLVSNELL 420
            + LKGKPRFADFNL+P NWGAHF PW ++M   YPWLEK+ LKRM VTD DL L++    
Sbjct: 131  VTLKGKPRFADFNLMPPNWGAHFAPWVSAMAMTYPWLEKVHLKRMSVTDDDLALLAESFS 190

Query: 421  GFKELVLDFCEGFGTTGLAFIASNCRQLRVLDLIENAVLEDACDWISCFPESETCLECLA 600
            GFKELVL  C+GFGT+GLA + S CRQL+VLDLIE+ V +D  DWISCFP++ETCLE L 
Sbjct: 191  GFKELVLVCCDGFGTSGLAIVVSRCRQLKVLDLIESEVSDDEVDWISCFPDTETCLESLI 250

Query: 601  FDCIDTPVNFEALEQLVARSPSLKKLRLNQHVSIEQLWRLMVRAPQLTDLGTGCFVSADP 780
            FDC+D P++F+ALE+LVARSPSLKKLRLN++VSI QL+RLMVRAP LT LGTG F  ++ 
Sbjct: 251  FDCVDCPIDFDALERLVARSPSLKKLRLNRYVSIGQLYRLMVRAPHLTHLGTGSFSPSED 310

Query: 781  MVQVDVQRDLPLAFAACKSLVSLSGFSVIVPEYLCTIYPVCANLISLNFSYTTINTEQLK 960
            + QV+   D   AFAACKSLV LSGF  ++P+YL  I PVCANL SLNFSY  ++ EQLK
Sbjct: 311  VAQVEQGPDYASAFAACKSLVCLSGFRELIPDYLPAINPVCANLTSLNFSYAEVSAEQLK 370

Query: 961  SFIRHCHKLQKLWVLDIIGDEGLQAV 1038
              I +CHKLQ  WVLD I DEGLQAV
Sbjct: 371  PIISNCHKLQIFWVLDSICDEGLQAV 396


>ref|XP_002514006.1| TRANSPORT INHIBITOR RESPONSE 1 protein, putative [Ricinus communis]
            gi|223547092|gb|EEF48589.1| TRANSPORT INHIBITOR RESPONSE
            1 protein, putative [Ricinus communis]
          Length = 635

 Score =  435 bits (1118), Expect = e-119
 Identities = 216/345 (62%), Positives = 259/345 (75%), Gaps = 5/345 (1%)
 Frame = +1

Query: 19   SGEHATCSSSSSFPEEVLDNILH----FLPTRHHRNSFSLVCKTWYKADTLTRYELFIGN 186
            SG  +     + +P++VL+N+L     FL +R  RN+ SLVCK+WY+ + LTR ELFIGN
Sbjct: 52   SGPSSVPDYQAPYPDQVLENVLENVLCFLTSRRDRNAASLVCKSWYRVEALTRSELFIGN 111

Query: 187  CYSISPQRAIQRFGNIKSLVLKGKPRFADFNLIPVNWGAHFKPWCTSMTSAYPWLEKISL 366
            CY++S +RA  RF  IKS+ LKGKPRFADFNL+P NWGAHF PW T+M  AYPWLEK+ L
Sbjct: 112  CYAVSTRRATCRFTRIKSVTLKGKPRFADFNLMPPNWGAHFAPWVTTMGKAYPWLEKVHL 171

Query: 367  KRMLVTDSDLLLVSNELLGFKELVLDFCEGFGTTGLAFIASNCRQLRVLDLIENAVLEDA 546
            KRM VTD DL L++    GFKELVL  C+GFGT+GLA +AS CRQLRVLDLIE+ V +D 
Sbjct: 172  KRMTVTDDDLALLAESFSGFKELVLVCCDGFGTSGLAIVASRCRQLRVLDLIESEVADDE 231

Query: 547  CDWISCFPESETCLECLAFDCIDTPVNFEALEQLVARSPSLKKLRLNQHVSIEQLWRLMV 726
             DWISCFPESE CLE L FDC++  +NF+ALE+LVARSPSLKK+RLN++VS+ QL+RLM+
Sbjct: 232  VDWISCFPESEMCLESLIFDCVECSINFDALERLVARSPSLKKIRLNRYVSVSQLYRLMI 291

Query: 727  RAPQLTDLGTGCF-VSADPMVQVDVQRDLPLAFAACKSLVSLSGFSVIVPEYLCTIYPVC 903
            RAPQLT LGTG F  S D   Q + + D   AFAACKSLV LSGF  I+ +YL  IYPVC
Sbjct: 292  RAPQLTHLGTGSFRPSDDAAAQGEQEPDYASAFAACKSLVCLSGFKEILSDYLPAIYPVC 351

Query: 904  ANLISLNFSYTTINTEQLKSFIRHCHKLQKLWVLDIIGDEGLQAV 1038
            ANL SLN SY  I  +QLK  I +CHKLQ  WVLD I DEGLQAV
Sbjct: 352  ANLNSLNLSYANITADQLKPIISNCHKLQTFWVLDSICDEGLQAV 396


>ref|XP_004160292.1| PREDICTED: transport inhibitor response 1-like protein-like [Cucumis
            sativus]
          Length = 637

 Score =  432 bits (1110), Expect = e-119
 Identities = 208/350 (59%), Positives = 262/350 (74%), Gaps = 5/350 (1%)
 Frame = +1

Query: 4    KTRKMSGEHATCSSSSSFPEE-----VLDNILHFLPTRHHRNSFSLVCKTWYKADTLTRY 168
            KTR  +G     ++S+S   E     VL+N+LHFL +R  RN+ SLVCK+WY+ + LTR 
Sbjct: 42   KTRNCTGCSGDVTASASASAENILHNVLENVLHFLTSRRDRNAASLVCKSWYRVEALTRS 101

Query: 169  ELFIGNCYSISPQRAIQRFGNIKSLVLKGKPRFADFNLIPVNWGAHFKPWCTSMTSAYPW 348
            +LFIGNCY++SP+R   RF  ++S+ +KGKPRFADFNL+P NWGAHF PW  +M  +YPW
Sbjct: 102  DLFIGNCYAVSPRRVTSRFNRVRSVSIKGKPRFADFNLMPDNWGAHFTPWVAAMAKSYPW 161

Query: 349  LEKISLKRMLVTDSDLLLVSNELLGFKELVLDFCEGFGTTGLAFIASNCRQLRVLDLIEN 528
            LE++ LKRM VTD DL L+++   GFKELVL  CEGFGT+G+A +A+ CR LRVLDLIE+
Sbjct: 162  LERVYLKRMSVTDDDLALLADSFPGFKELVLFCCEGFGTSGIAVVAARCRHLRVLDLIES 221

Query: 529  AVLEDACDWISCFPESETCLECLAFDCIDTPVNFEALEQLVARSPSLKKLRLNQHVSIEQ 708
             V +D  DWISCFPE ETCLE L FDC++ P+NFEAL++LV+RSPSLKKL +N++VSI Q
Sbjct: 222  DVADDEVDWISCFPEKETCLESLIFDCVEFPINFEALQRLVSRSPSLKKLGVNRYVSIAQ 281

Query: 709  LWRLMVRAPQLTDLGTGCFVSADPMVQVDVQRDLPLAFAACKSLVSLSGFSVIVPEYLCT 888
            L+ LM+ AP+LT LGTG F +++ +V  D + D   AFAACKSLV LSGF  I+P+YL  
Sbjct: 282  LYHLMIWAPRLTHLGTGSFSTSEAVVHGDSEPDFASAFAACKSLVCLSGFKDILPDYLPC 341

Query: 889  IYPVCANLISLNFSYTTINTEQLKSFIRHCHKLQKLWVLDIIGDEGLQAV 1038
            IYPVCANL +LN S+  I  EQLK  I HCHKLQ  W LD I DEGLQAV
Sbjct: 342  IYPVCANLTTLNLSFANITPEQLKPVISHCHKLQTFWALDSICDEGLQAV 391


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