BLASTX nr result
ID: Coptis21_contig00010890
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00010890
(1707 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002323230.1| predicted protein [Populus trichocarpa] gi|2... 338 3e-90
ref|XP_002323227.1| predicted protein [Populus trichocarpa] gi|2... 330 7e-88
ref|XP_002517284.1| conserved hypothetical protein [Ricinus comm... 322 1e-85
ref|XP_004136624.1| PREDICTED: probable mediator of RNA polymera... 316 1e-83
ref|XP_002277659.2| PREDICTED: uncharacterized protein LOC100250... 315 2e-83
>ref|XP_002323230.1| predicted protein [Populus trichocarpa] gi|222867860|gb|EEF04991.1|
predicted protein [Populus trichocarpa]
Length = 474
Score = 338 bits (867), Expect = 3e-90
Identities = 205/480 (42%), Positives = 274/480 (57%), Gaps = 41/480 (8%)
Frame = -1
Query: 1590 MECSSIDYWRNYFSAANGSIFEIIENAITIASSDYCEEFRIRRDGIVGKLYMWEWSRCVG 1411
M+ S+DYWR+YF A+ IF II++AI +A+SD +EF++RRD I +L+ +C G
Sbjct: 1 MKSVSLDYWRDYFRTASSDIFGIIDHAILVAASDCPKEFKLRRDRIAERLFSCRLIKCSG 60
Query: 1410 CNGVELGVQKKDEDV--------------------------------GFKFRSGGKCDVV 1327
CN VEL V DED GF++ GG
Sbjct: 61 CNQVELAVPGHDEDERDDRGCCSKRRDGDNSGSDDDEEEVDIDIDDGGFEYEGGGS---- 116
Query: 1326 EGKESKVGSSVFENE------NINLNYTSKYSYHXXXXXXXXXXXXXXXXXXVLRIKEHL 1165
KESKV SS +N+ N+N S +S+ VLRIK+ L
Sbjct: 117 --KESKVNSSNRDNDFDNGEVNVNDQLVSNFSFGEAEALTDEIEEVSQTVDEVLRIKDIL 174
Query: 1164 SKTEEESEDTILESLRRLKLMTLSVETLQATKIGMEVACLRKHKSKRISSFARTLVKEWK 985
+++ES+ +LESLR+L+LM L+V+TL+AT+IG V LRKH SK+I ARTL+++WK
Sbjct: 175 YNSQDESDSVLLESLRKLRLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEDWK 234
Query: 984 DLVDKWCSVVPDVIGGEGTPESMNPSVV--EEGLPSPPLDEGAFLATPTTSLELSRFFES 811
LVD+W S + G EGTP+S+NPSVV EEGLPSPPLDEGAF AT TS+ELS+FF+
Sbjct: 235 VLVDEWYSAANVIRGNEGTPDSVNPSVVDEEEGLPSPPLDEGAFFATQPTSMELSQFFDG 294
Query: 810 MDDDGNLRNCGEFNMNSENERKATLQNQTFPTRMMQ-PNHEVVGSKENERQDMRKRESVN 634
MDDDGN RN GEF N + R+ + +NQ + Q P + SK+NE Q MRK+E V
Sbjct: 295 MDDDGNPRNNGEFIKNHVSRRRPSAENQNISKQKQQTPKGANMPSKDNESQQMRKQEDVV 354
Query: 633 KQTMIMNTDXXXXXXXXXXXXXXVTDGTTLRQELDTVNAQKLTRSAQQDKSKCLDGETDQ 454
K + N + + T L ++ D V +Q+ + QQDK K D Q
Sbjct: 355 KASKPSNANSGPGRPLKQNVEQKMNQETVLIRKTDKVTSQRKPPTGQQDKLKSSDEVAVQ 414
Query: 453 IKLEAAKRKLHKGYQQAEDAKKQRTIQLMEMHELPRQGLGPVILRSRLGTHHRNVLAGRR 274
+KLEA KRKL + YQQAE AK+QRTIQ+ME+H+LP+QG RLG H+R+ GRR
Sbjct: 415 MKLEATKRKLQERYQQAEKAKRQRTIQVMELHDLPKQGHVQKNQPMRLGNHNRHWAHGRR 474
>ref|XP_002323227.1| predicted protein [Populus trichocarpa] gi|222867857|gb|EEF04988.1|
predicted protein [Populus trichocarpa]
Length = 480
Score = 330 bits (846), Expect = 7e-88
Identities = 204/486 (41%), Positives = 274/486 (56%), Gaps = 47/486 (9%)
Frame = -1
Query: 1590 MECSSIDYWRNYFSAANGSIFEIIENAITIASSDYCEEFRIRRDGIVGKLYMWEWSRCVG 1411
M+ S+DYWR+YF A+ IF II++AI +A+SD +EF++RRD I +L+ +C G
Sbjct: 1 MKSVSLDYWRDYFRTASSDIFGIIDHAILVAASDCPKEFKLRRDRIAERLFSCRLIKCSG 60
Query: 1410 CNGVELGVQKKDEDV--------------------------------GFKFRSGGKCDVV 1327
CN VEL V DED GF++ GG
Sbjct: 61 CNQVELAVPGHDEDERDDRGCCSKRRDGDNSGSDDDEEEVDIDIDDGGFEYEGGGS---- 116
Query: 1326 EGKESKVGSSVFENE------NINLNYTSKYSYHXXXXXXXXXXXXXXXXXXVLRIKEHL 1165
KESKV SS +N+ N+N S +S+ VLRIK+ L
Sbjct: 117 --KESKVNSSNRDNDFDNGEVNVNDQLVSNFSFGEAEALTDEIEEVSQTVDEVLRIKDIL 174
Query: 1164 SKTEEESEDTILESLRRLKLMTLSVETLQATKIGMEVACLRKHKSKRISSFARTLVKEWK 985
+++ES+ +LESLR+L+LM L+V+TL+AT+IG V LRKH S++I ARTL+++WK
Sbjct: 175 YNSQDESDSVLLESLRKLRLMALTVDTLKATEIGKAVNGLRKHGSEQIRHLARTLIEDWK 234
Query: 984 DLVDKWCSVVPDVIG------GEGTPESMNPSVV--EEGLPSPPLDEGAFLATPTTSLEL 829
LVD+W S + G EGTP+S+NPSVV EEGLPSPPLDEGAF AT TS+EL
Sbjct: 235 VLVDEWYSAANVIRGRNLLASNEGTPDSVNPSVVDEEEGLPSPPLDEGAFFATQPTSMEL 294
Query: 828 SRFFESMDDDGNLRNCGEFNMNSENERKATLQNQTFPTRMMQ-PNHEVVGSKENERQDMR 652
S+FF+ MDDDGN RN GEF N + R+ + +NQ + Q P + SK+NE Q MR
Sbjct: 295 SQFFDGMDDDGNPRNNGEFIKNHVSRRRPSAENQNISKQKQQTPKGANMPSKDNESQQMR 354
Query: 651 KRESVNKQTMIMNTDXXXXXXXXXXXXXXVTDGTTLRQELDTVNAQKLTRSAQQDKSKCL 472
K+E V K + N + + T L ++ D V +Q+ + QQDK K
Sbjct: 355 KQEDVVKASKPSNANSGPGRPLKQNVEQKMNQETVLIRKTDKVTSQRKPPTGQQDKLKSS 414
Query: 471 DGETDQIKLEAAKRKLHKGYQQAEDAKKQRTIQLMEMHELPRQGLGPVILRSRLGTHHRN 292
D Q+KLEA KRKL + YQQAE AK+QRTIQ+ME+H+LP+QG RLG H+R+
Sbjct: 415 DEVAVQMKLEATKRKLQERYQQAEKAKRQRTIQVMELHDLPKQGHVQKNQPMRLGNHNRH 474
Query: 291 VLAGRR 274
GRR
Sbjct: 475 WAHGRR 480
>ref|XP_002517284.1| conserved hypothetical protein [Ricinus communis]
gi|223543547|gb|EEF45077.1| conserved hypothetical
protein [Ricinus communis]
Length = 473
Score = 322 bits (826), Expect = 1e-85
Identities = 196/475 (41%), Positives = 266/475 (56%), Gaps = 36/475 (7%)
Frame = -1
Query: 1590 MECSSIDYWRNYFSAANGSIFEIIENAITIASSDYCEEFRIRRDGIVGKLYMWEWSRCVG 1411
M+ S+DYWRNYF AN IF II++AI +A+SD +EFR+RRD I +L+ +RC G
Sbjct: 1 MKSVSLDYWRNYFRTANSDIFAIIDHAIMVAASDCPKEFRLRRDRIAERLFSCRLTRCSG 60
Query: 1410 CNGVELGV----------------------QKKDEDVGF---KFRSGGKCDVVEGKESKV 1306
CN V+L V D+DV +F +GG KESKV
Sbjct: 61 CNHVDLAVPAHEGENDDGGACKRRDDHHVEDDDDDDVDIDVCEFEAGGT-----SKESKV 115
Query: 1305 GSSVFENEN--------INLNYTSKYSYHXXXXXXXXXXXXXXXXXXVLRIKEHLSKTEE 1150
SS ++N +N S +SY VLRIK+ L + +
Sbjct: 116 NSSNNRDDNDIDIGEVNVNDQLLSNFSYGEAEALTDEIEEESMVVGEVLRIKDILLHSRD 175
Query: 1149 ESEDTILESLRRLKLMTLSVETLQATKIGMEVACLRKHKSKRISSFARTLVKEWKDLVDK 970
ESE + ESLRRL+LM L+V+TL+AT+IG V LRKH S++I AR L+ WK LVD+
Sbjct: 176 ESESVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSQQIRHLARVLIDGWKVLVDE 235
Query: 969 WCSVVPDVIGGEGTPESMNPSVV--EEGLPSPPLDEGAFLATPTTSLELSRFFESMDDDG 796
W S + G EGTPES+NPSVV E+GLPSPPLDE F A T +EL++FF+ MDDDG
Sbjct: 236 WYSTTKAIRGDEGTPESVNPSVVDEEDGLPSPPLDEAFFFAAQNTGIELAQFFDGMDDDG 295
Query: 795 NLRNCGEFNMNSENERKATLQNQTFPTRMMQ-PNHEVVGSKENERQDMRKRESVNKQTMI 619
N RN GEF N EN RK++L+ + P R P+ V +K+N+ R++E++ K
Sbjct: 296 NPRNSGEFIKNRENGRKSSLEQKNIPKRKEHTPSEANVVAKDNKSHQSRRQEAMRKPNKP 355
Query: 618 MNTDXXXXXXXXXXXXXXVTDGTTLRQELDTVNAQKLTRSAQQDKSKCLDGETDQIKLEA 439
T + + ++++ D + Q+ QQDK KC D + Q KLEA
Sbjct: 356 STTVSGPGRPTKQSVEQKANNESKIQRKTDKLVTQRKLPGGQQDKFKCSDDDAVQKKLEA 415
Query: 438 AKRKLHKGYQQAEDAKKQRTIQLMEMHELPRQGLGPVILRSRLGTHHRNVLAGRR 274
KRKL + YQQAE+AK+QRTIQ+ME+H+LP+Q L R G+H+R+ GRR
Sbjct: 416 TKRKLQERYQQAENAKRQRTIQVMELHDLPKQALVQKNPNMRPGSHNRHWAHGRR 470
>ref|XP_004136624.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like [Cucumis sativus]
Length = 452
Score = 316 bits (809), Expect = 1e-83
Identities = 195/456 (42%), Positives = 249/456 (54%), Gaps = 15/456 (3%)
Frame = -1
Query: 1596 LVMECSSIDYWRNYFSAANGSIFEIIENAITIASSDYCEEFRIRRDGIVGKLYMWEWSRC 1417
+ + S+D WRNYF AN IF II+ AI +A+SD +EFR+RRD I +L+ +RC
Sbjct: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
Query: 1416 VGCNGVELGV----QKKDEDVGFK---FRSGGKCDVVEGKESKVGSSVFENENINLNYTS 1258
+GC+ VEL V D + GFK R G + + KESKV SS + +N N S
Sbjct: 61 LGCDRVELAVAGDIDGDDGETGFKSDFVRDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
Query: 1257 KYSYHXXXXXXXXXXXXXXXXXXVLRIKEHLSKTEEESEDTILESLRRLKLMTLSVETLQ 1078
+S+ VLRIKE L+ E+ES+ + ESLRRL+LM LSV+TLQ
Sbjct: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQ 180
Query: 1077 ATKIGMEVACLRKHKSKRISSFARTLVKEWKDLVDKWCSVVPDVIGGEGTPESMNPSVV- 901
AT+IG V CLRKH SKRI AR L+ EWK++VD W V G E TP+S N S
Sbjct: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVDLWVQATAAVQGAEVTPDSKNKSAAV 240
Query: 900 -------EEGLPSPPLDEGAFLATPTTSLELSRFFESMDDDGNLRNCGEFNMNSENERKA 742
EEGLPSPPLDE AF T TS+ELS+FF+ MDDDGN RN G+F N N RK
Sbjct: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT 300
Query: 741 TLQNQTFPTRMMQPNHEVVGSKENERQDMRKRESVNKQTMIMNTDXXXXXXXXXXXXXXV 562
+ NQ PTR Q V E + K + V +
Sbjct: 301 SNGNQN-PTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRAQKLSTEQK 359
Query: 561 TDGTTLRQELDTVNAQKLTRSAQQDKSKCLDGETDQIKLEAAKRKLHKGYQQAEDAKKQR 382
+ +++L+ K QQD KC D Q+KLEA KRKL + YQQAE+AKKQR
Sbjct: 360 DNHEKFQRKLEKPTIPKRN---QQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQR 416
Query: 381 TIQLMEMHELPRQGLGPVILRSRLGTHHRNVLAGRR 274
TIQ+ME+H+LP+QG+G + G +RN GRR
Sbjct: 417 TIQVMELHDLPKQGIGHRNPHLKSGGFNRNWANGRR 452
>ref|XP_002277659.2| PREDICTED: uncharacterized protein LOC100250012 [Vitis vinifera]
Length = 521
Score = 315 bits (807), Expect = 2e-83
Identities = 199/486 (40%), Positives = 263/486 (54%), Gaps = 57/486 (11%)
Frame = -1
Query: 1578 SIDYWRNYFSAANGSIFEIIENAITIASSDYCEEFRIRRDGIVGKLYMWEWSRCVGCNGV 1399
++D WRNYF AN IF IIE+AI +A+SD +EFR+RRD I +L+ + +RC GC+ V
Sbjct: 7 ALDQWRNYFRTANSDIFGIIEHAILVAASDCPKEFRLRRDRIAERLFSCKLTRCFGCDRV 66
Query: 1398 ELGVQKKDEDVGFKFRSGGKCDVV-------EGKESKVGSSVFENENINLNYTSKYSYHX 1240
EL V + D GG C + KESK S ++ +N+N S YSY
Sbjct: 67 ELAVPEND---------GGGCKIEFDMDVNSSSKESKANSIREDHGEMNMNQVSNYSYGE 117
Query: 1239 XXXXXXXXXXXXXXXXXVLRIKEHLSKTEEESEDTILESLRRLKLMTLSVETLQATKIGM 1060
VLRI+E L +++ES+ + +SLRRL+LM LSV+ L+AT+IG
Sbjct: 118 AEALTDEIEEETQIAGEVLRIREILEHSKDESDSVLFDSLRRLQLMVLSVDNLKATEIGK 177
Query: 1059 EVACLRKHKSKRISSFARTLVKEWKDLVDKWCSVVPDVIGGEGTPESMNPSVV-----EE 895
V LRKH SK+I ARTL+ EWKD+VD+W + + EGTP+S+NPSVV EE
Sbjct: 178 AVNGLRKHGSKQIRQLARTLIDEWKDMVDEWVNATAAI--AEGTPDSVNPSVVDDDDDEE 235
Query: 894 GLPSPPLDEGAFLATPTTSLELSRFFESMDDDGNLRNCGEFNMNSENERKATLQNQTFPT 715
GLP PP+DE +FL T TSLELS+FF+ MDDDGN RN GEFN N EN RK L+NQ
Sbjct: 236 GLPFPPMDELSFLTTQPTSLELSQFFDGMDDDGNPRNNGEFNRNRENGRKPALENQNISK 295
Query: 714 RMMQPNHEVVGSKENERQDMRKRESVNKQTMIMNT--------------------DXXXX 595
R Q E G +++ Q ++K+E V K +NT D
Sbjct: 296 RKQQLPDEANGVTKDKGQQIKKQEPVVKSNKPINTQSGFGRPQEILVRPNRPSNTDSGPG 355
Query: 594 XXXXXXXXXXVTDGTTLRQELDTVNAQKLTRSAQQDKSKCLDGETDQIKLEAAKRKLHKG 415
V + T Q+ D + QQDKSK + +T Q+KLEAAKRKLH+
Sbjct: 356 RPPKPGVGQKVNNETKFLQKSDKPAIHRKPVVGQQDKSKSSEEDTIQVKLEAAKRKLHER 415
Query: 414 YQQAED-------------------------AKKQRTIQLMEMHELPRQGLGPVILRSRL 310
YQQAED AK+QRTIQ+ME+ +LP+QGLG R
Sbjct: 416 YQQAEDGLSLPLQILDIFLFGHSFKYWSFARAKRQRTIQVMELQDLPKQGLGHRNPHIRH 475
Query: 309 GTHHRN 292
G ++R+
Sbjct: 476 GNNNRH 481