BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010886
         (697 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P82244.1|RK34_SPIOL RecName: Full=50S ribosomal protein L34, ...   100   3e-19
ref|XP_002317427.1| predicted protein [Populus trichocarpa] gi|2...    95   2e-17
ref|XP_002522558.1| 50S ribosomal protein L34, chloroplast precu...    94   3e-17
ref|NP_001238013.1| uncharacterized protein LOC100500433 [Glycin...    91   2e-16
ref|XP_004134668.1| PREDICTED: 50S ribosomal protein L34, chloro...    91   3e-16

>sp|P82244.1|RK34_SPIOL RecName: Full=50S ribosomal protein L34, chloroplastic; AltName:
           Full=CL34; Flags: Precursor gi|189096152|pdb|3BBO|4
           Chain 4, Homology Model For The Spinach Chloroplast 50s
           Subunit Fitted To 9.4a Cryo-Em Map Of The 70s
           Chlororibosome gi|7578860|gb|AAF64157.1|AF238221_1
           plastid ribosomal protein L34 precursor [Spinacia
           oleracea]
          Length = 152

 Score =  100 bits (249), Expect = 3e-19
 Identities = 62/133 (46%), Positives = 71/133 (53%)
 Frame = +1

Query: 100 RAPSASLSFLAGTRTPTSSIRLGTTSTRSGLLHCXXXXXXXXXXXXXXXXXXXXXXNFSF 279
           R PSASL+F+ G+RT    +     S RSG LHC                        S 
Sbjct: 18  RTPSASLTFITGSRTTNKRVSFNGGSARSGSLHCSFLAPSSSLSSNFSGLSLGLDLT-SN 76

Query: 280 SNVKTRKRSGHVVCAGRAALCLTKRSRSRKSLAXXXXXXXXXXXXXXXAILKRRRAKGRK 459
           + V T +    VV AG+AALCLTKRSRSRKSLA               A+LKRRRAKGRK
Sbjct: 77  TGVSTDRCRRFVVRAGKAALCLTKRSRSRKSLARTHGFRLRMSTTSGRALLKRRRAKGRK 136

Query: 460 ILCTKTNPNSGVR 498
           ILCTKTNP+SG R
Sbjct: 137 ILCTKTNPSSGKR 149


>ref|XP_002317427.1| predicted protein [Populus trichocarpa] gi|222860492|gb|EEE98039.1|
           predicted protein [Populus trichocarpa]
          Length = 131

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 62/130 (47%), Positives = 72/130 (55%), Gaps = 2/130 (1%)
 Frame = +1

Query: 109 SASLSFLAGTRTPTS-SIRLGTTST-RSGLLHCXXXXXXXXXXXXXXXXXXXXXXNFSFS 282
           SASLS ++G+RT    S+ + T ST RSGLLHC                        S  
Sbjct: 1   SASLSLISGSRTKRGFSMNVATNSTTRSGLLHCSFLPSSSLSLPSSFSGLSLGLDLNSNI 60

Query: 283 NVKTRKRSGHVVCAGRAALCLTKRSRSRKSLAXXXXXXXXXXXXXXXAILKRRRAKGRKI 462
            V+     G VV AG+AALCLTKRSRSRKSLA               A+LKRRRAKGRK+
Sbjct: 61  GVRKDIGRGLVVRAGKAALCLTKRSRSRKSLARTHGFRRRMRTTSGRAVLKRRRAKGRKV 120

Query: 463 LCTKTNPNSG 492
           LCTK+NPNSG
Sbjct: 121 LCTKSNPNSG 130


>ref|XP_002522558.1| 50S ribosomal protein L34, chloroplast precursor, putative [Ricinus
           communis] gi|223538249|gb|EEF39858.1| 50S ribosomal
           protein L34, chloroplast precursor, putative [Ricinus
           communis]
          Length = 161

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 59/133 (44%), Positives = 71/133 (53%), Gaps = 2/133 (1%)
 Frame = +1

Query: 100 RAPSASLSFLAGTRTPT--SSIRLGTTSTRSGLLHCXXXXXXXXXXXXXXXXXXXXXXNF 273
           R PSASLS   GTR     S   +  +++RSGLLHC                        
Sbjct: 26  RCPSASLSLSTGTRPRNKFSMNVISNSTSRSGLLHCSFLSTSSLSLSSSFSGLSLGLDLN 85

Query: 274 SFSNVKTRKRSGHVVCAGRAALCLTKRSRSRKSLAXXXXXXXXXXXXXXXAILKRRRAKG 453
           S + V+  +  G VV AG+AALC TKR+RSRKSLA               A+LKRRRAKG
Sbjct: 86  SSTGVRKGRGYGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTSGRAVLKRRRAKG 145

Query: 454 RKILCTKTNPNSG 492
           RK+LCTK+NPNSG
Sbjct: 146 RKVLCTKSNPNSG 158


>ref|NP_001238013.1| uncharacterized protein LOC100500433 [Glycine max]
           gi|255630327|gb|ACU15520.1| unknown [Glycine max]
          Length = 146

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 63/136 (46%), Positives = 76/136 (55%), Gaps = 5/136 (3%)
 Frame = +1

Query: 100 RAPSASLSFLAGTRTPTS-SIRLGTT--STRSGLLHCXXXXXXXXXXXXXXXXXXXXXXN 270
           RAP+ S S +  T  P+S S+ L  T  S RS LLHC                      +
Sbjct: 11  RAPTPSASLILTTPKPSSLSLNLTRTCSSARSPLLHCSFLSSPSHLSSPSSVSGLSLGLD 70

Query: 271 FSFSNVKTR--KRSGHVVCAGRAALCLTKRSRSRKSLAXXXXXXXXXXXXXXXAILKRRR 444
            + SNV T+  K SG VV AG+AALCLTKRSRSRKSLA               A+L+RRR
Sbjct: 71  LT-SNVGTKRGKGSGLVVRAGKAALCLTKRSRSRKSLARTHGFRKRMSTPGGRAVLRRRR 129

Query: 445 AKGRKILCTKTNPNSG 492
           AKGR++LCTKT+PNSG
Sbjct: 130 AKGRRVLCTKTHPNSG 145


>ref|XP_004134668.1| PREDICTED: 50S ribosomal protein L34, chloroplastic-like [Cucumis
           sativus] gi|449479241|ref|XP_004155546.1| PREDICTED: 50S
           ribosomal protein L34, chloroplastic-like [Cucumis
           sativus]
          Length = 155

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 62/136 (45%), Positives = 70/136 (51%), Gaps = 3/136 (2%)
 Frame = +1

Query: 100 RAPSASLSFLAGTRTPTSSIRLGTT---STRSGLLHCXXXXXXXXXXXXXXXXXXXXXXN 270
           R PSASL F  G+R    S+ L T    S RSGLLHC                       
Sbjct: 20  RVPSASLVFSTGSRG-YCSVSLNTVNNNSARSGLLHCSFLPSSSLSCSSSFSGLSLGLDW 78

Query: 271 FSFSNVKTRKRSGHVVCAGRAALCLTKRSRSRKSLAXXXXXXXXXXXXXXXAILKRRRAK 450
            S   V   K  G VV AG+AALC TKR+RSRKSLA               A+LKRRRAK
Sbjct: 79  SSKVGVGQGKGRGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAK 138

Query: 451 GRKILCTKTNPNSGVR 498
           GRK+LCTK+NP+SG R
Sbjct: 139 GRKVLCTKSNPSSGKR 154