BLASTX nr result

ID: Coptis21_contig00010884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010884
         (725 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305124.1| predicted protein [Populus trichocarpa] gi|2...   184   2e-44
ref|XP_002329829.1| predicted protein [Populus trichocarpa] gi|2...   182   6e-44
ref|XP_002273997.2| PREDICTED: LOW QUALITY PROTEIN: glyoxysomal ...   181   1e-43
emb|CBI30593.3| unnamed protein product [Vitis vinifera]              181   1e-43
emb|CAN59793.1| hypothetical protein VITISV_001901 [Vitis vinifera]   181   1e-43

>ref|XP_002305124.1| predicted protein [Populus trichocarpa] gi|222848088|gb|EEE85635.1|
            predicted protein [Populus trichocarpa]
          Length = 752

 Score =  184 bits (467), Expect = 2e-44
 Identities = 98/167 (58%), Positives = 124/167 (74%), Gaps = 1/167 (0%)
 Frame = +3

Query: 6    SPSVCSGVVARVVKAQGHIHPIEPGSEKTATKYLPAMLETTASVYGGGSGGAIVNANSEM 185
            SPS+CSG V++VVKA+    P    S +    ++PAMLETTA+V+ GGSGGA+VN+   M
Sbjct: 572  SPSICSGAVSKVVKAKA---PSYCQSVQGGYSHIPAMLETTAAVHPGGSGGAVVNSEGHM 628

Query: 186  IGLVTSNARFGKGHVIPQMNFSIPCAALEPVFKFSEDMQDISVLQDLDRPDEHLSTVWAL 365
            IGLVTS AR G G VIP +NFSIPCA L P+F F++DM+DIS+LQ+LDRP+EHLS+VWAL
Sbjct: 629  IGLVTSKARHGGGTVIPHLNFSIPCAVLAPIFDFAKDMRDISLLQNLDRPNEHLSSVWAL 688

Query: 366  TPPESSRKVPPFLRKPES-LQENNTEKKGSRFAKFIAERNGEVFLGS 503
             PP S +  PP    PES LQ+   + KGSRFAKFIAER  ++F G+
Sbjct: 689  MPPLSPKPSPPLPSLPESILQDYEKQVKGSRFAKFIAERE-KLFRGT 734


>ref|XP_002329829.1| predicted protein [Populus trichocarpa] gi|222870891|gb|EEF08022.1|
            predicted protein [Populus trichocarpa]
          Length = 716

 Score =  182 bits (462), Expect = 6e-44
 Identities = 96/167 (57%), Positives = 125/167 (74%), Gaps = 1/167 (0%)
 Frame = +3

Query: 6    SPSVCSGVVARVVKAQGHIHPIEPGSEKTATKYLPAMLETTASVYGGGSGGAIVNANSEM 185
            SPSVCSGVV++VVK +    P    S +    ++PAMLETTA+V+ GGSGGA++N+   M
Sbjct: 549  SPSVCSGVVSKVVKTKA---PPYCQSLQGRNSHIPAMLETTAAVHPGGSGGAVINSEGHM 605

Query: 186  IGLVTSNARFGKGHVIPQMNFSIPCAALEPVFKFSEDMQDISVLQDLDRPDEHLSTVWAL 365
            IGLVTSNAR G G VIP +NFSIPCA L P+F F+++M+DI++LQ+LD+P+E LS+VWAL
Sbjct: 606  IGLVTSNARHGGGTVIPHLNFSIPCAVLAPIFDFAKEMRDIALLQNLDQPNEDLSSVWAL 665

Query: 366  TPPESSRKVPPFLRKPES-LQENNTEKKGSRFAKFIAERNGEVFLGS 503
             PP   +  PP    PES LQ+N  + KGSRFAKFIAER+ ++F GS
Sbjct: 666  MPPLPPKPTPPLSTLPESILQDNEKQVKGSRFAKFIAERD-KLFRGS 711


>ref|XP_002273997.2| PREDICTED: LOW QUALITY PROTEIN: glyoxysomal processing protease,
            glyoxysomal-like [Vitis vinifera]
          Length = 753

 Score =  181 bits (459), Expect = 1e-43
 Identities = 97/165 (58%), Positives = 123/165 (74%), Gaps = 3/165 (1%)
 Frame = +3

Query: 9    PSVCSGVVARVVKAQGHIHPIEPGSEKTATKYLPAMLETTASVYGGGSGGAIVNANSEMI 188
            PSVC G VA+VVK++  +   +   ++   +  PAMLETTA+V+ GGSGGA+VN+   MI
Sbjct: 570  PSVCVGEVAKVVKSKMPLS-CQSSLQENILEDFPAMLETTAAVHAGGSGGAVVNSEGHMI 628

Query: 189  GLVTSNARFGKGHVIPQMNFSIPCAALEPVFKFSEDMQDISVLQDLDRPDEHLSTVWALT 368
            GL+TSNAR G G VIP +NFSIPCAAL+ V+KFS+DMQ +S+L DLD+P+EHLS+VWAL 
Sbjct: 629  GLITSNARHGGGTVIPHLNFSIPCAALQAVYKFSKDMQGMSLLLDLDKPNEHLSSVWALM 688

Query: 369  PPESSR---KVPPFLRKPESLQENNTEKKGSRFAKFIAERNGEVF 494
            PP S +    +P     P+SL E+N E KGSRFAKFIAERN EVF
Sbjct: 689  PPLSPKPGPSLPNLPNLPQSLLEDNKEGKGSRFAKFIAERN-EVF 732


>emb|CBI30593.3| unnamed protein product [Vitis vinifera]
          Length = 682

 Score =  181 bits (459), Expect = 1e-43
 Identities = 97/165 (58%), Positives = 123/165 (74%), Gaps = 3/165 (1%)
 Frame = +3

Query: 9   PSVCSGVVARVVKAQGHIHPIEPGSEKTATKYLPAMLETTASVYGGGSGGAIVNANSEMI 188
           PSVC G VA+VVK++  +   +   ++   +  PAMLETTA+V+ GGSGGA+VN+   MI
Sbjct: 499 PSVCVGEVAKVVKSKMPLS-CQSSLQENILEDFPAMLETTAAVHAGGSGGAVVNSEGHMI 557

Query: 189 GLVTSNARFGKGHVIPQMNFSIPCAALEPVFKFSEDMQDISVLQDLDRPDEHLSTVWALT 368
           GL+TSNAR G G VIP +NFSIPCAAL+ V+KFS+DMQ +S+L DLD+P+EHLS+VWAL 
Sbjct: 558 GLITSNARHGGGTVIPHLNFSIPCAALQAVYKFSKDMQGMSLLLDLDKPNEHLSSVWALM 617

Query: 369 PPESSR---KVPPFLRKPESLQENNTEKKGSRFAKFIAERNGEVF 494
           PP S +    +P     P+SL E+N E KGSRFAKFIAERN EVF
Sbjct: 618 PPLSPKPGPSLPNLPNLPQSLLEDNKEGKGSRFAKFIAERN-EVF 661


>emb|CAN59793.1| hypothetical protein VITISV_001901 [Vitis vinifera]
          Length = 840

 Score =  181 bits (459), Expect = 1e-43
 Identities = 97/165 (58%), Positives = 123/165 (74%), Gaps = 3/165 (1%)
 Frame = +3

Query: 9    PSVCSGVVARVVKAQGHIHPIEPGSEKTATKYLPAMLETTASVYGGGSGGAIVNANSEMI 188
            PSVC G VA+VVK++  +   +   ++   +  PAMLETTA+V+ GGSGGA+VN+   MI
Sbjct: 657  PSVCVGEVAKVVKSKMPLS-CQSSLQENILEDFPAMLETTAAVHAGGSGGAVVNSEGHMI 715

Query: 189  GLVTSNARFGKGHVIPQMNFSIPCAALEPVFKFSEDMQDISVLQDLDRPDEHLSTVWALT 368
            GL+TSNAR G G VIP +NFSIPCAAL+ V+KFS+DMQ +S+L DLD+P+EHLS+VWAL 
Sbjct: 716  GLITSNARHGGGTVIPHLNFSIPCAALQAVYKFSKDMQGMSLLLDLDKPNEHLSSVWALM 775

Query: 369  PPESSR---KVPPFLRKPESLQENNTEKKGSRFAKFIAERNGEVF 494
            PP S +    +P     P+SL E+N E KGSRFAKFIAERN EVF
Sbjct: 776  PPLSPKPGPSLPNLPNLPQSLLEDNKEGKGSRFAKFIAERN-EVF 819


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