BLASTX nr result

ID: Coptis21_contig00010878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010878
         (1444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277576.1| PREDICTED: probable pectate lyase 4-like [Vi...   583   e-164
emb|CBI32661.3| unnamed protein product [Vitis vinifera]              582   e-164
gb|ABK96132.1| unknown [Populus trichocarpa]                          582   e-164
ref|XP_002309435.1| predicted protein [Populus trichocarpa] gi|2...   579   e-163
gb|ABK93648.1| unknown [Populus trichocarpa]                          574   e-161

>ref|XP_002277576.1| PREDICTED: probable pectate lyase 4-like [Vitis vinifera]
          Length = 373

 Score =  583 bits (1502), Expect = e-164
 Identities = 285/375 (76%), Positives = 314/375 (83%), Gaps = 3/375 (0%)
 Frame = -3

Query: 1376 MGSVHGRYTTSGQRDNTR--TXXXXXXXXXXXXXXXPTHSTNT-MTSLPYAHVDSSLRAL 1206
            MG  HGR + + ++  T   T               P+++  T M+ LPYAHVDS+LRAL
Sbjct: 1    MGGAHGRCSGTHRKHPTPAYTTFPDTTAPASAFGRDPSNTVRTNMSCLPYAHVDSNLRAL 60

Query: 1205 AAQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLRQGCRQKEPLWIVFEVSGTIHLASYLT 1026
            A QAEGFGRLAIGGLHGPLYHVTTLADDGPGSLR GCR+KEPLWIVFEVSG IHL+SYL 
Sbjct: 61   AGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLRDGCRKKEPLWIVFEVSGIIHLSSYLN 120

Query: 1025 VSSFKTIDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGPDVDGIQIKPNSRHIWIDR 846
            VSS+KTIDGRGQRIK TGKGLRLKECEHVIICNLEFEGGRGPDVDGIQIKPNS+HIWIDR
Sbjct: 121  VSSYKTIDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGPDVDGIQIKPNSKHIWIDR 180

Query: 845  CSLRDYEDGLIDITRESTDITISRCHFSGHDKTMLIGADPTHIGDRCIRVTIHHCFFDGT 666
            CSLRD++DGLIDITR STDITISRCHFS HDKTMLIGADP+H GDRCIRVTIHHCFFDGT
Sbjct: 181  CSLRDFDDGLIDITRASTDITISRCHFSQHDKTMLIGADPSHTGDRCIRVTIHHCFFDGT 240

Query: 665  RQRHPRVRYGKVHLYNNYTRDWGIYAVCISVDAQIYSQCNIYEAGKKKGTFKYLPEKAAD 486
            RQRHPRVRYGKVHLYNNYTR+WGIYAVC SV++QIYSQCNIYEAG KK  FKYL EKAAD
Sbjct: 241  RQRHPRVRYGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGHKKVAFKYLTEKAAD 300

Query: 485  KEEVSSGWVISEGDLYLNGAQACLPKEAIKDCTFHPSEFYPTWTTEAPSESLKEVLRHCT 306
            KEE  +G + SEGDL++NG QA L   A +   FHP EFYPTWT EAPS++LK+VL HCT
Sbjct: 301  KEEERTGCLRSEGDLFINGTQAGLMTVASE--MFHPREFYPTWTVEAPSDALKQVLHHCT 358

Query: 305  GWQSVPRPAEKTIIA 261
            GWQ VPRPA++  IA
Sbjct: 359  GWQCVPRPADEAAIA 373


>emb|CBI32661.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score =  582 bits (1501), Expect = e-164
 Identities = 276/331 (83%), Positives = 298/331 (90%)
 Frame = -3

Query: 1253 MTSLPYAHVDSSLRALAAQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLRQGCRQKEPLW 1074
            M+ LPYAHVDS+LRALA QAEGFGRLAIGGLHGPLYHVTTLADDGPGSLR GCR+KEPLW
Sbjct: 1    MSCLPYAHVDSNLRALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLRDGCRKKEPLW 60

Query: 1073 IVFEVSGTIHLASYLTVSSFKTIDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGPDV 894
            IVFEVSG IHL+SYL VSS+KTIDGRGQRIK TGKGLRLKECEHVIICNLEFEGGRGPDV
Sbjct: 61   IVFEVSGIIHLSSYLNVSSYKTIDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGPDV 120

Query: 893  DGIQIKPNSRHIWIDRCSLRDYEDGLIDITRESTDITISRCHFSGHDKTMLIGADPTHIG 714
            DGIQIKPNS+HIWIDRCSLRD++DGLIDITR STDITISRCHFS HDKTMLIGADP+H G
Sbjct: 121  DGIQIKPNSKHIWIDRCSLRDFDDGLIDITRASTDITISRCHFSQHDKTMLIGADPSHTG 180

Query: 713  DRCIRVTIHHCFFDGTRQRHPRVRYGKVHLYNNYTRDWGIYAVCISVDAQIYSQCNIYEA 534
            DRCIRVTIHHCFFDGTRQRHPRVRYGKVHLYNNYTR+WGIYAVC SV++QIYSQCNIYEA
Sbjct: 181  DRCIRVTIHHCFFDGTRQRHPRVRYGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA 240

Query: 533  GKKKGTFKYLPEKAADKEEVSSGWVISEGDLYLNGAQACLPKEAIKDCTFHPSEFYPTWT 354
            G KK  FKYL EKAADKEE  +G + SEGDL++NG QA L   A +   FHP EFYPTWT
Sbjct: 241  GHKKVAFKYLTEKAADKEEERTGCLRSEGDLFINGTQAGLMTVASE--MFHPREFYPTWT 298

Query: 353  TEAPSESLKEVLRHCTGWQSVPRPAEKTIIA 261
             EAPS++LK+VL HCTGWQ VPRPA++  IA
Sbjct: 299  VEAPSDALKQVLHHCTGWQCVPRPADEAAIA 329


>gb|ABK96132.1| unknown [Populus trichocarpa]
          Length = 389

 Score =  582 bits (1500), Expect = e-164
 Identities = 271/336 (80%), Positives = 302/336 (89%)
 Frame = -3

Query: 1268 HSTNTMTSLPYAHVDSSLRALAAQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLRQGCRQ 1089
            H+++  TSLPY+HVDS+LRALAAQAEGFGR AIGGLHGP+Y+VTTL DDGPGSLR GCR+
Sbjct: 53   HASSMATSLPYSHVDSALRALAAQAEGFGRCAIGGLHGPIYYVTTLLDDGPGSLRDGCRK 112

Query: 1088 KEPLWIVFEVSGTIHLASYLTVSSFKTIDGRGQRIKFTGKGLRLKECEHVIICNLEFEGG 909
            KEPLWIVFEVSGTI L SYL VSS+KTIDGRGQRIK TGKGLRLKECEHVIICNLEFEGG
Sbjct: 113  KEPLWIVFEVSGTIQLGSYLNVSSYKTIDGRGQRIKLTGKGLRLKECEHVIICNLEFEGG 172

Query: 908  RGPDVDGIQIKPNSRHIWIDRCSLRDYEDGLIDITRESTDITISRCHFSGHDKTMLIGAD 729
            RGPDVDGIQIKP S+HIWIDRCSLRDY+DGLIDI RESTDIT+SRCHF+ HDKT+LIGAD
Sbjct: 173  RGPDVDGIQIKPKSKHIWIDRCSLRDYDDGLIDINRESTDITVSRCHFAQHDKTILIGAD 232

Query: 728  PTHIGDRCIRVTIHHCFFDGTRQRHPRVRYGKVHLYNNYTRDWGIYAVCISVDAQIYSQC 549
            PTH+GDRCIRVTIHHCFFDGTRQRHPRVR+GKVHLYNNY R+WGIYAVC SV++QIYSQC
Sbjct: 233  PTHVGDRCIRVTIHHCFFDGTRQRHPRVRFGKVHLYNNYIRNWGIYAVCASVESQIYSQC 292

Query: 548  NIYEAGKKKGTFKYLPEKAADKEEVSSGWVISEGDLYLNGAQACLPKEAIKDCTFHPSEF 369
            NIYEAG+KK  FKYL EKAADKEE SSG + SEGDL++ GAQA L  E  + C FHPSE+
Sbjct: 293  NIYEAGQKKIAFKYLSEKAADKEEASSGCIRSEGDLFVIGAQAGLMAEDGEFCMFHPSEY 352

Query: 368  YPTWTTEAPSESLKEVLRHCTGWQSVPRPAEKTIIA 261
            YPTWT E P++SLK+VL+HCTGWQ VPRPA+  + A
Sbjct: 353  YPTWTIEPPTDSLKQVLQHCTGWQCVPRPADHPLAA 388


>ref|XP_002309435.1| predicted protein [Populus trichocarpa] gi|222855411|gb|EEE92958.1|
            predicted protein [Populus trichocarpa]
          Length = 333

 Score =  579 bits (1492), Expect = e-163
 Identities = 270/330 (81%), Positives = 298/330 (90%)
 Frame = -3

Query: 1250 TSLPYAHVDSSLRALAAQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLRQGCRQKEPLWI 1071
            TSLPY+HVDS+LRALAAQAEGFGR AIGGLHGP+Y+VTTL DDGPGSLR GCR+KEPLWI
Sbjct: 3    TSLPYSHVDSALRALAAQAEGFGRCAIGGLHGPIYYVTTLLDDGPGSLRDGCRKKEPLWI 62

Query: 1070 VFEVSGTIHLASYLTVSSFKTIDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGPDVD 891
            VFEVSGTI L SYL VSS+KTIDGRGQRIK TGKGLRLKECEHVIICNLEFEGGRGPDVD
Sbjct: 63   VFEVSGTIQLGSYLNVSSYKTIDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGPDVD 122

Query: 890  GIQIKPNSRHIWIDRCSLRDYEDGLIDITRESTDITISRCHFSGHDKTMLIGADPTHIGD 711
            GIQIKP S+HIWIDRCSLRDY+DGLIDI RESTDIT+SRCHF+ HDKT+LIGADPTH+GD
Sbjct: 123  GIQIKPKSKHIWIDRCSLRDYDDGLIDINRESTDITVSRCHFAQHDKTILIGADPTHVGD 182

Query: 710  RCIRVTIHHCFFDGTRQRHPRVRYGKVHLYNNYTRDWGIYAVCISVDAQIYSQCNIYEAG 531
            RCIRVTIHHCFFDGTRQRHPRVR+GKVHLYNNY R+WGIYAVC SV++QIYSQCNIYEAG
Sbjct: 183  RCIRVTIHHCFFDGTRQRHPRVRFGKVHLYNNYIRNWGIYAVCASVESQIYSQCNIYEAG 242

Query: 530  KKKGTFKYLPEKAADKEEVSSGWVISEGDLYLNGAQACLPKEAIKDCTFHPSEFYPTWTT 351
            +KK  FKYL EKAADKEE SSG + SEGDL++ GAQA L  E  + C FHPSE+YPTWT 
Sbjct: 243  QKKIAFKYLSEKAADKEEASSGCIRSEGDLFVIGAQAGLMTEDGEVCMFHPSEYYPTWTV 302

Query: 350  EAPSESLKEVLRHCTGWQSVPRPAEKTIIA 261
            E P++SLK+VL+HCTGWQ VPRPA+  + A
Sbjct: 303  EPPTDSLKQVLQHCTGWQCVPRPADHPLAA 332


>gb|ABK93648.1| unknown [Populus trichocarpa]
          Length = 386

 Score =  574 bits (1479), Expect = e-161
 Identities = 270/337 (80%), Positives = 298/337 (88%)
 Frame = -3

Query: 1271 THSTNTMTSLPYAHVDSSLRALAAQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLRQGCR 1092
            T +    T+LPY HVDSSLRALAAQAEGFGR A GGLHGP+Y+VTTLADDGPGSLR GCR
Sbjct: 49   TRTPKMATALPYPHVDSSLRALAAQAEGFGRSANGGLHGPIYYVTTLADDGPGSLRDGCR 108

Query: 1091 QKEPLWIVFEVSGTIHLASYLTVSSFKTIDGRGQRIKFTGKGLRLKECEHVIICNLEFEG 912
            +KEPLWIVFEVSGTI L SYL VSS+KTIDGRGQRIK TGKGLRLKECEHVIICNLEFEG
Sbjct: 109  KKEPLWIVFEVSGTIQLRSYLNVSSYKTIDGRGQRIKLTGKGLRLKECEHVIICNLEFEG 168

Query: 911  GRGPDVDGIQIKPNSRHIWIDRCSLRDYEDGLIDITRESTDITISRCHFSGHDKTMLIGA 732
            GRGPDVDGIQIKP S+HIWIDRCSLRDY+DGLIDITRESTDITISRC+F  HDKTMLIGA
Sbjct: 169  GRGPDVDGIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITISRCYFGQHDKTMLIGA 228

Query: 731  DPTHIGDRCIRVTIHHCFFDGTRQRHPRVRYGKVHLYNNYTRDWGIYAVCISVDAQIYSQ 552
            DPTH+GDRCIRVTIHHCFFDGTRQRHPRVR+GKVHLYNNYTR+WGIYAVC SV++QIYSQ
Sbjct: 229  DPTHVGDRCIRVTIHHCFFDGTRQRHPRVRFGKVHLYNNYTRNWGIYAVCASVESQIYSQ 288

Query: 551  CNIYEAGKKKGTFKYLPEKAADKEEVSSGWVISEGDLYLNGAQACLPKEAIKDCTFHPSE 372
             NIYEAG+KK  FKYL EKAADKE+  SG + SEGDL++ G QA L  E  + C FHPSE
Sbjct: 289  SNIYEAGQKKIAFKYLSEKAADKEKARSGSIRSEGDLFVTGTQAGLMTEDGECCMFHPSE 348

Query: 371  FYPTWTTEAPSESLKEVLRHCTGWQSVPRPAEKTIIA 261
            +YPTWT E P++SLK+VL+HCTGWQ VPRPA++ + A
Sbjct: 349  YYPTWTVEPPTDSLKQVLQHCTGWQCVPRPADQPLAA 385


Top