BLASTX nr result
ID: Coptis21_contig00010875
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00010875 (909 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002275994.2| PREDICTED: thylakoid lumenal 17.4 kDa protei... 290 2e-76 emb|CBI23038.3| unnamed protein product [Vitis vinifera] 290 3e-76 ref|XP_002526251.1| Thylakoid lumenal 17.4 kDa protein, chloropl... 287 2e-75 ref|XP_002318440.1| predicted protein [Populus trichocarpa] gi|2... 276 4e-72 ref|XP_004146234.1| PREDICTED: thylakoid lumenal 17.4 kDa protei... 271 2e-70 >ref|XP_002275994.2| PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Vitis vinifera] Length = 244 Score = 290 bits (743), Expect = 2e-76 Identities = 160/239 (66%), Positives = 177/239 (74%), Gaps = 6/239 (2%) Frame = -1 Query: 909 EMATFSISFPRTSFSLHSPTPKSMS---SKLYGPIRINCSSS---PPLQNHHQQTFKEIK 748 +MAT SI SL +PK +L+ P RI+CS+S P L+ Q FKE+K Sbjct: 12 KMATLSIPL-----SLQHSSPKRHRFSVPELHSPFRISCSASWDSPELKASSSQ-FKELK 65 Query: 747 KXXXXXXXXXXXXXXXXXXXANSRLPPLSTDPKRCERAFVGNTIGQANGVYDTAIDLRFC 568 A+ RLPPLST+P RCERAFVGNTIGQANGVYD IDLRFC Sbjct: 66 NVAFGILAVCAVTAASPVIAASQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFC 125 Query: 567 DYTNEKSNLKGKSLTAALMSGAKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLDRVNFG 388 DYTNEKSNLKGKSL AALMS AKFDGADMSEVVMSKAYAVGASFKGVDF+NAVLDRVNFG Sbjct: 126 DYTNEKSNLKGKSLAAALMSEAKFDGADMSEVVMSKAYAVGASFKGVDFTNAVLDRVNFG 185 Query: 387 KANMQGVVFRNAVLSGSTFVEAQLKDATFEDTIIGYIDLQNLCLNTSINDEGRAELGCR 211 KAN+QG VF+N VLSGSTF +AQL+DA FEDTIIGYIDLQ +C NTSIN +GRAELGCR Sbjct: 186 KANLQGAVFKNTVLSGSTFDQAQLEDAVFEDTIIGYIDLQKICTNTSINADGRAELGCR 244 >emb|CBI23038.3| unnamed protein product [Vitis vinifera] Length = 232 Score = 290 bits (742), Expect = 3e-76 Identities = 160/238 (67%), Positives = 176/238 (73%), Gaps = 6/238 (2%) Frame = -1 Query: 906 MATFSISFPRTSFSLHSPTPKSMS---SKLYGPIRINCSSS---PPLQNHHQQTFKEIKK 745 MAT SI SL +PK +L+ P RI+CS+S P L+ Q FKE+K Sbjct: 1 MATLSIPL-----SLQHSSPKRHRFSVPELHSPFRISCSASWDSPELKASSSQ-FKELKN 54 Query: 744 XXXXXXXXXXXXXXXXXXXANSRLPPLSTDPKRCERAFVGNTIGQANGVYDTAIDLRFCD 565 A+ RLPPLST+P RCERAFVGNTIGQANGVYD IDLRFCD Sbjct: 55 VAFGILAVCAVTAASPVIAASQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCD 114 Query: 564 YTNEKSNLKGKSLTAALMSGAKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGK 385 YTNEKSNLKGKSL AALMS AKFDGADMSEVVMSKAYAVGASFKGVDF+NAVLDRVNFGK Sbjct: 115 YTNEKSNLKGKSLAAALMSEAKFDGADMSEVVMSKAYAVGASFKGVDFTNAVLDRVNFGK 174 Query: 384 ANMQGVVFRNAVLSGSTFVEAQLKDATFEDTIIGYIDLQNLCLNTSINDEGRAELGCR 211 AN+QG VF+N VLSGSTF +AQL+DA FEDTIIGYIDLQ +C NTSIN +GRAELGCR Sbjct: 175 ANLQGAVFKNTVLSGSTFDQAQLEDAVFEDTIIGYIDLQKICTNTSINADGRAELGCR 232 >ref|XP_002526251.1| Thylakoid lumenal 17.4 kDa protein, chloroplast precursor, putative [Ricinus communis] gi|223534416|gb|EEF36120.1| Thylakoid lumenal 17.4 kDa protein, chloroplast precursor, putative [Ricinus communis] Length = 228 Score = 287 bits (735), Expect = 2e-75 Identities = 155/228 (67%), Positives = 169/228 (74%) Frame = -1 Query: 894 SISFPRTSFSLHSPTPKSMSSKLYGPIRINCSSSPPLQNHHQQTFKEIKKXXXXXXXXXX 715 +ISFP + SL S + +L+ PI+I CS S + FKE++ Sbjct: 3 TISFPLSVRSLSSERSRFPVPQLHPPIKIICSGSA--DGSKSKPFKELQSVACGLLAAWA 60 Query: 714 XXXXXXXXXANSRLPPLSTDPKRCERAFVGNTIGQANGVYDTAIDLRFCDYTNEKSNLKG 535 A+ RLPPLST+P RCE+AFVGNTIGQANGVYD IDLRFCDYTNEKSNLKG Sbjct: 61 VTSASPVIAASQRLPPLSTEPNRCEKAFVGNTIGQANGVYDKPIDLRFCDYTNEKSNLKG 120 Query: 534 KSLTAALMSGAKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANMQGVVFRN 355 KSL AALMS AKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKAN+QG VF+N Sbjct: 121 KSLAAALMSDAKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGAVFKN 180 Query: 354 AVLSGSTFVEAQLKDATFEDTIIGYIDLQNLCLNTSINDEGRAELGCR 211 VLSGSTF EAQL DA FEDTIIGYIDLQ LC NTSIN EGR LGCR Sbjct: 181 TVLSGSTFDEAQLADAVFEDTIIGYIDLQKLCKNTSINLEGREILGCR 228 >ref|XP_002318440.1| predicted protein [Populus trichocarpa] gi|222859113|gb|EEE96660.1| predicted protein [Populus trichocarpa] Length = 240 Score = 276 bits (707), Expect = 4e-72 Identities = 149/237 (62%), Positives = 169/237 (71%), Gaps = 6/237 (2%) Frame = -1 Query: 903 ATFSISFPRTSFSLH---SPTPKSMSSKLYGPIRINCSSSPPLQNHHQQTF---KEIKKX 742 ATFS+ + F L+ S + L+ P++I CS S + F KEI Sbjct: 4 ATFSLPLSQNKFPLYHFSSARRRFPIPDLHSPLKICCSGSRDGSQSRESLFQFKKEINYV 63 Query: 741 XXXXXXXXXXXXXXXXXXANSRLPPLSTDPKRCERAFVGNTIGQANGVYDTAIDLRFCDY 562 A RLPPLST+P RCE+AFVGNTIGQANGVYD IDLRFCDY Sbjct: 64 ACGILAAWAVTAASPVIAAGQRLPPLSTEPNRCEKAFVGNTIGQANGVYDKPIDLRFCDY 123 Query: 561 TNEKSNLKGKSLTAALMSGAKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 382 TN+KSNLKGKSL AALMS AKFDGADM+EVVMSKAYAVGASF+GVDFSNAVLDRVNFGKA Sbjct: 124 TNDKSNLKGKSLAAALMSDAKFDGADMTEVVMSKAYAVGASFRGVDFSNAVLDRVNFGKA 183 Query: 381 NMQGVVFRNAVLSGSTFVEAQLKDATFEDTIIGYIDLQNLCLNTSINDEGRAELGCR 211 +++G VF+N VLSGSTF EAQL+DA FEDTIIGYIDLQ +C NTSI +GRAELGCR Sbjct: 184 DLKGAVFKNTVLSGSTFDEAQLEDAIFEDTIIGYIDLQKICRNTSIGPDGRAELGCR 240 >ref|XP_004146234.1| PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucumis sativus] gi|449522387|ref|XP_004168208.1| PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucumis sativus] Length = 237 Score = 271 bits (693), Expect = 2e-70 Identities = 133/158 (84%), Positives = 144/158 (91%) Frame = -1 Query: 684 NSRLPPLSTDPKRCERAFVGNTIGQANGVYDTAIDLRFCDYTNEKSNLKGKSLTAALMSG 505 N RLPPLST+P RCERAFVGNTIGQANGVYD IDLRFCDYTNEK+ LKGKSL AALMS Sbjct: 80 NQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSD 139 Query: 504 AKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANMQGVVFRNAVLSGSTFVE 325 AKFDGAD+SEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKAN+QG +F+N VLSGSTF + Sbjct: 140 AKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDD 199 Query: 324 AQLKDATFEDTIIGYIDLQNLCLNTSINDEGRAELGCR 211 AQL+DA FEDTIIGYIDLQ LC+N +I+ EGRAELGCR Sbjct: 200 AQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237