BLASTX nr result

ID: Coptis21_contig00010869 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010869
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001240906.1| uncharacterized protein LOC100778880 [Glycin...    79   6e-13
ref|XP_003573536.1| PREDICTED: queuine tRNA-ribosyltransferase s...    78   1e-12
ref|XP_002325954.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
tpg|DAA46703.1| TPA: hypothetical protein ZEAMMB73_649296 [Zea m...    76   3e-12
gb|ACN26524.1| unknown [Zea mays] gi|414868147|tpg|DAA46704.1| T...    76   3e-12

>ref|NP_001240906.1| uncharacterized protein LOC100778880 [Glycine max]
           gi|255634786|gb|ACU17754.1| unknown [Glycine max]
          Length = 401

 Score = 78.6 bits (192), Expect = 6e-13
 Identities = 37/52 (71%), Positives = 45/52 (86%)
 Frame = +2

Query: 38  LADEVPAWVLEKRNKTSVDRTVHWLDECLALDPVGGKLALGAIVGGSSVDRQ 193
           LADEVPAWV +KRNKTSVDRTV WLD+CLAL+PV G +  GAIVGG+++D +
Sbjct: 151 LADEVPAWVTDKRNKTSVDRTVRWLDDCLALNPVVGSV-FGAIVGGTNLDER 201


>ref|XP_003573536.1| PREDICTED: queuine tRNA-ribosyltransferase subunit QTRTD1-like
           [Brachypodium distachyon]
          Length = 396

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 35/52 (67%), Positives = 42/52 (80%)
 Frame = +2

Query: 38  LADEVPAWVLEKRNKTSVDRTVHWLDECLALDPVGGKLALGAIVGGSSVDRQ 193
           LADEVPAWV EKRNKTSV+RT+ WLD CLALD   G+  LG +VGGSS++ +
Sbjct: 146 LADEVPAWVNEKRNKTSVERTLRWLDACLALDVAAGQNTLGVVVGGSSIEER 197


>ref|XP_002325954.1| predicted protein [Populus trichocarpa] gi|222862829|gb|EEF00336.1|
           predicted protein [Populus trichocarpa]
          Length = 277

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/52 (71%), Positives = 42/52 (80%)
 Frame = +2

Query: 38  LADEVPAWVLEKRNKTSVDRTVHWLDECLALDPVGGKLALGAIVGGSSVDRQ 193
           LADEVPAWV +KRNK SVDRTV WLDEC+AL P  G +A GAIVGGS V+ +
Sbjct: 149 LADEVPAWVSKKRNKNSVDRTVKWLDECVALSPASG-VAFGAIVGGSDVEER 199


>tpg|DAA46703.1| TPA: hypothetical protein ZEAMMB73_649296 [Zea mays]
          Length = 398

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 35/54 (64%), Positives = 42/54 (77%)
 Frame = +2

Query: 38  LADEVPAWVLEKRNKTSVDRTVHWLDECLALDPVGGKLALGAIVGGSSVDRQVL 199
           LADEVPAWV EKRNK SVDRT+ WLD C+ALD   G  + G IVGGSS++++ L
Sbjct: 148 LADEVPAWVTEKRNKVSVDRTLRWLDACIALDVASGTNSFGVIVGGSSLEQRKL 201


>gb|ACN26524.1| unknown [Zea mays] gi|414868147|tpg|DAA46704.1| TPA: hypothetical
           protein ZEAMMB73_649296 [Zea mays]
          Length = 398

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 35/54 (64%), Positives = 42/54 (77%)
 Frame = +2

Query: 38  LADEVPAWVLEKRNKTSVDRTVHWLDECLALDPVGGKLALGAIVGGSSVDRQVL 199
           LADEVPAWV EKRNK SVDRT+ WLD C+ALD   G  + G IVGGSS++++ L
Sbjct: 148 LADEVPAWVTEKRNKVSVDRTLRWLDACIALDVASGTNSFGVIVGGSSLEQRKL 201


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