BLASTX nr result
ID: Coptis21_contig00010869
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00010869 (553 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001240906.1| uncharacterized protein LOC100778880 [Glycin... 79 6e-13 ref|XP_003573536.1| PREDICTED: queuine tRNA-ribosyltransferase s... 78 1e-12 ref|XP_002325954.1| predicted protein [Populus trichocarpa] gi|2... 77 2e-12 tpg|DAA46703.1| TPA: hypothetical protein ZEAMMB73_649296 [Zea m... 76 3e-12 gb|ACN26524.1| unknown [Zea mays] gi|414868147|tpg|DAA46704.1| T... 76 3e-12 >ref|NP_001240906.1| uncharacterized protein LOC100778880 [Glycine max] gi|255634786|gb|ACU17754.1| unknown [Glycine max] Length = 401 Score = 78.6 bits (192), Expect = 6e-13 Identities = 37/52 (71%), Positives = 45/52 (86%) Frame = +2 Query: 38 LADEVPAWVLEKRNKTSVDRTVHWLDECLALDPVGGKLALGAIVGGSSVDRQ 193 LADEVPAWV +KRNKTSVDRTV WLD+CLAL+PV G + GAIVGG+++D + Sbjct: 151 LADEVPAWVTDKRNKTSVDRTVRWLDDCLALNPVVGSV-FGAIVGGTNLDER 201 >ref|XP_003573536.1| PREDICTED: queuine tRNA-ribosyltransferase subunit QTRTD1-like [Brachypodium distachyon] Length = 396 Score = 77.8 bits (190), Expect = 1e-12 Identities = 35/52 (67%), Positives = 42/52 (80%) Frame = +2 Query: 38 LADEVPAWVLEKRNKTSVDRTVHWLDECLALDPVGGKLALGAIVGGSSVDRQ 193 LADEVPAWV EKRNKTSV+RT+ WLD CLALD G+ LG +VGGSS++ + Sbjct: 146 LADEVPAWVNEKRNKTSVERTLRWLDACLALDVAAGQNTLGVVVGGSSIEER 197 >ref|XP_002325954.1| predicted protein [Populus trichocarpa] gi|222862829|gb|EEF00336.1| predicted protein [Populus trichocarpa] Length = 277 Score = 76.6 bits (187), Expect = 2e-12 Identities = 37/52 (71%), Positives = 42/52 (80%) Frame = +2 Query: 38 LADEVPAWVLEKRNKTSVDRTVHWLDECLALDPVGGKLALGAIVGGSSVDRQ 193 LADEVPAWV +KRNK SVDRTV WLDEC+AL P G +A GAIVGGS V+ + Sbjct: 149 LADEVPAWVSKKRNKNSVDRTVKWLDECVALSPASG-VAFGAIVGGSDVEER 199 >tpg|DAA46703.1| TPA: hypothetical protein ZEAMMB73_649296 [Zea mays] Length = 398 Score = 76.3 bits (186), Expect = 3e-12 Identities = 35/54 (64%), Positives = 42/54 (77%) Frame = +2 Query: 38 LADEVPAWVLEKRNKTSVDRTVHWLDECLALDPVGGKLALGAIVGGSSVDRQVL 199 LADEVPAWV EKRNK SVDRT+ WLD C+ALD G + G IVGGSS++++ L Sbjct: 148 LADEVPAWVTEKRNKVSVDRTLRWLDACIALDVASGTNSFGVIVGGSSLEQRKL 201 >gb|ACN26524.1| unknown [Zea mays] gi|414868147|tpg|DAA46704.1| TPA: hypothetical protein ZEAMMB73_649296 [Zea mays] Length = 398 Score = 76.3 bits (186), Expect = 3e-12 Identities = 35/54 (64%), Positives = 42/54 (77%) Frame = +2 Query: 38 LADEVPAWVLEKRNKTSVDRTVHWLDECLALDPVGGKLALGAIVGGSSVDRQVL 199 LADEVPAWV EKRNK SVDRT+ WLD C+ALD G + G IVGGSS++++ L Sbjct: 148 LADEVPAWVTEKRNKVSVDRTLRWLDACIALDVASGTNSFGVIVGGSSLEQRKL 201