BLASTX nr result

ID: Coptis21_contig00010864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010864
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_563750.2| RAB GTPase homolog A5E [Arabidopsis thaliana] g...   212   2e-53
sp|P19892.1|RAA5E_ARATH RecName: Full=Ras-related protein RABA5e...   212   2e-53
gb|AAA74116.1| putative, partial [Nicotiana tabacum]                  211   4e-53
ref|XP_002527386.1| protein with unknown function [Ricinus commu...   211   4e-53
gb|ACJ84485.1| unknown [Medicago truncatula] gi|388507312|gb|AFK...   211   4e-53

>ref|NP_563750.2| RAB GTPase homolog A5E [Arabidopsis thaliana]
           gi|29893534|gb|AAP06819.1| putative RAS-related protein
           ARA-1 [Arabidopsis thaliana] gi|332189776|gb|AEE27897.1|
           RAB GTPase homolog A5E [Arabidopsis thaliana]
          Length = 261

 Score =  212 bits (540), Expect = 2e-53
 Identities = 107/141 (75%), Positives = 118/141 (83%)
 Frame = +1

Query: 1   QERFRAVTSAYYRGAVGAFIVYDITRRTTFDSVGRWLDELNTHSDTTIARMLVGNKLDLE 180
           QERFRAVTSAYYRGAVGA +VYDITRRTTF+SVGRWLDEL  HSDTT+ARMLVGNK DLE
Sbjct: 114 QERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDLE 173

Query: 181 NIRAVSVEEGKSLAEEEGMFFIETSALDSTNVRTAFEMVIKDIYNNVSRKVLNSDSYKAD 360
           NIRAVSVEEGK+LAEEEG+FF+ETSALDSTNV+TAFEMVI DIYNNVSRK LNSD+YK +
Sbjct: 174 NIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKDE 233

Query: 361 XXXXXXXXXXXXDEGSKTTQG 423
                       +  SK + G
Sbjct: 234 LTVNRVSLVKDDNSASKQSSG 254


>sp|P19892.1|RAA5E_ARATH RecName: Full=Ras-related protein RABA5e; Short=AtRABA5e; AltName:
           Full=Ras-related protein Ara-1; Flags: Precursor
           gi|6850310|gb|AAF29387.1|AC009999_7 Strong similarity to
           a RAS-related protein ARA-1 from Arabidopsis thaliana
           gi|114085, and is a member of the RAS PF|00071 family.
           EST gb|D01026 comes from this gene [Arabidopsis
           thaliana] gi|12083322|gb|AAG48820.1|AF332457_1 putative
           RAS-related protein ARA-1 [Arabidopsis thaliana]
           gi|538283|gb|AAC13655.1| ras-related protein
           [Arabidopsis thaliana]
          Length = 218

 Score =  212 bits (540), Expect = 2e-53
 Identities = 107/141 (75%), Positives = 118/141 (83%)
 Frame = +1

Query: 1   QERFRAVTSAYYRGAVGAFIVYDITRRTTFDSVGRWLDELNTHSDTTIARMLVGNKLDLE 180
           QERFRAVTSAYYRGAVGA +VYDITRRTTF+SVGRWLDEL  HSDTT+ARMLVGNK DLE
Sbjct: 71  QERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDLE 130

Query: 181 NIRAVSVEEGKSLAEEEGMFFIETSALDSTNVRTAFEMVIKDIYNNVSRKVLNSDSYKAD 360
           NIRAVSVEEGK+LAEEEG+FF+ETSALDSTNV+TAFEMVI DIYNNVSRK LNSD+YK +
Sbjct: 131 NIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKDE 190

Query: 361 XXXXXXXXXXXXDEGSKTTQG 423
                       +  SK + G
Sbjct: 191 LTVNRVSLVKDDNSASKQSSG 211


>gb|AAA74116.1| putative, partial [Nicotiana tabacum]
          Length = 209

 Score =  211 bits (538), Expect = 4e-53
 Identities = 106/141 (75%), Positives = 118/141 (83%)
 Frame = +1

Query: 1   QERFRAVTSAYYRGAVGAFIVYDITRRTTFDSVGRWLDELNTHSDTTIARMLVGNKLDLE 180
           QERFRAVTSAYYRGA GA +VYDITRRTTFDS+ RWLDEL THSDTT+ARMLVGNK DL+
Sbjct: 63  QERFRAVTSAYYRGAFGALVVYDITRRTTFDSIPRWLDELKTHSDTTVARMLVGNKCDLD 122

Query: 181 NIRAVSVEEGKSLAEEEGMFFIETSALDSTNVRTAFEMVIKDIYNNVSRKVLNSDSYKAD 360
           NIRAVSVEEGKSLAE EGMFF+ETSALD+TNV  AF+MVI++IYN+VSRKVLNSDSYKA+
Sbjct: 123 NIRAVSVEEGKSLAESEGMFFMETSALDATNVNKAFDMVIREIYNSVSRKVLNSDSYKAE 182

Query: 361 XXXXXXXXXXXXDEGSKTTQG 423
                        +GSK  QG
Sbjct: 183 LSVNRVSLVDNGTDGSKQNQG 203


>ref|XP_002527386.1| protein with unknown function [Ricinus communis]
           gi|223533238|gb|EEF34993.1| protein with unknown
           function [Ricinus communis]
          Length = 218

 Score =  211 bits (538), Expect = 4e-53
 Identities = 109/144 (75%), Positives = 122/144 (84%)
 Frame = +1

Query: 1   QERFRAVTSAYYRGAVGAFIVYDITRRTTFDSVGRWLDELNTHSDTTIARMLVGNKLDLE 180
           QERFRAVTSAYYRGAVGA IVYDI+RRTTFDSVGRWLDEL THSDTT+ARMLVGNK DLE
Sbjct: 71  QERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVARMLVGNKCDLE 130

Query: 181 NIRAVSVEEGKSLAEEEGMFFIETSALDSTNVRTAFEMVIKDIYNNVSRKVLNSDSYKAD 360
           NIR V+VEEGKSLAE EG+FF+ETSALDSTNV+ AFE+VI++IYNNVSRKVLNSD+YKA+
Sbjct: 131 NIRDVTVEEGKSLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKVLNSDTYKAE 190

Query: 361 XXXXXXXXXXXXDEGSKTTQGKFA 432
                       D GSK +Q  F+
Sbjct: 191 LSLNRVTLVNNSD-GSKQSQSYFS 213


>gb|ACJ84485.1| unknown [Medicago truncatula] gi|388507312|gb|AFK41722.1| unknown
           [Medicago truncatula]
          Length = 220

 Score =  211 bits (538), Expect = 4e-53
 Identities = 106/144 (73%), Positives = 121/144 (84%)
 Frame = +1

Query: 1   QERFRAVTSAYYRGAVGAFIVYDITRRTTFDSVGRWLDELNTHSDTTIARMLVGNKLDLE 180
           QERFRAVTSAYYRGAVGA IVYDI+RRTTFDSVGRWLDEL TH DTT+A MLVGNK DL+
Sbjct: 74  QERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVAMMLVGNKCDLD 133

Query: 181 NIRAVSVEEGKSLAEEEGMFFIETSALDSTNVRTAFEMVIKDIYNNVSRKVLNSDSYKAD 360
           NIR VS+EEGKSLAE EG+FF+ETSALDSTNV+TAFEMVI++IYNNVSRKVLNSD+YKA+
Sbjct: 134 NIRDVSIEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYNNVSRKVLNSDTYKAE 193

Query: 361 XXXXXXXXXXXXDEGSKTTQGKFA 432
                       +  SK ++G F+
Sbjct: 194 LSVNRVSLVNNGNSTSKQSKGYFS 217


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