BLASTX nr result

ID: Coptis21_contig00010860 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010860
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142784.1| PREDICTED: beta-1,4-mannosyl-glycoprotein 4-...    81   3e-13
ref|XP_003555004.1| PREDICTED: beta-1,4-mannosyl-glycoprotein 4-...    79   8e-13
ref|XP_002272340.2| PREDICTED: beta-1,4-mannosyl-glycoprotein 4-...    78   2e-12
ref|XP_003553455.1| PREDICTED: beta-1,4-mannosyl-glycoprotein 4-...    75   2e-11
ref|XP_003552002.1| PREDICTED: beta-1,4-mannosyl-glycoprotein 4-...    74   3e-11

>ref|XP_004142784.1| PREDICTED: beta-1,4-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase-like [Cucumis
           sativus] gi|449483790|ref|XP_004156692.1| PREDICTED:
           beta-1,4-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase-like [Cucumis
           sativus]
          Length = 386

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 35/40 (87%), Positives = 40/40 (100%)
 Frame = +1

Query: 1   IGKMGPIPRSFSAVHLPAFILNNAEKYKFLLPGNCRRESG 120
           IGKMGPIP+S+SAVHLP+F+LNNAEKYK+LLPGNCRRESG
Sbjct: 347 IGKMGPIPQSYSAVHLPSFLLNNAEKYKYLLPGNCRRESG 386


>ref|XP_003555004.1| PREDICTED: beta-1,4-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase-like [Glycine
           max]
          Length = 383

 Score = 79.3 bits (194), Expect = 8e-13
 Identities = 34/40 (85%), Positives = 39/40 (97%)
 Frame = +1

Query: 1   IGKMGPIPRSFSAVHLPAFILNNAEKYKFLLPGNCRRESG 120
           IGK+GPIP S+SAVHLP+++LNNAEKYKFLLPGNCRRESG
Sbjct: 344 IGKLGPIPHSYSAVHLPSYLLNNAEKYKFLLPGNCRRESG 383


>ref|XP_002272340.2| PREDICTED: beta-1,4-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase [Vitis vinifera]
          Length = 386

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 34/40 (85%), Positives = 38/40 (95%)
 Frame = +1

Query: 1   IGKMGPIPRSFSAVHLPAFILNNAEKYKFLLPGNCRRESG 120
           IGK+GPIP SFSAVHLPA++LNNAEKY FLLPGNC+RESG
Sbjct: 347 IGKLGPIPHSFSAVHLPAYLLNNAEKYGFLLPGNCKRESG 386


>ref|XP_003553455.1| PREDICTED: beta-1,4-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase-like [Glycine
           max]
          Length = 387

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 31/40 (77%), Positives = 38/40 (95%)
 Frame = +1

Query: 1   IGKMGPIPRSFSAVHLPAFILNNAEKYKFLLPGNCRRESG 120
           IGK+GPIP S+SAVHLPA++LNNAE+++FLLPGNCRRE G
Sbjct: 348 IGKLGPIPHSYSAVHLPAYLLNNAERFRFLLPGNCRRERG 387


>ref|XP_003552002.1| PREDICTED: beta-1,4-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase-like [Glycine
           max]
          Length = 392

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 33/39 (84%), Positives = 36/39 (92%)
 Frame = +1

Query: 1   IGKMGPIPRSFSAVHLPAFILNNAEKYKFLLPGNCRRES 117
           IGKMGPIP S+SAVHLPA++L NAEKYKFLLPGNC RES
Sbjct: 353 IGKMGPIPHSYSAVHLPAYLLENAEKYKFLLPGNCLRES 391


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