BLASTX nr result
ID: Coptis21_contig00010842
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00010842 (1741 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera] 100 1e-18 ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thalia... 89 3e-15 ref|NP_567422.1| F-box/LRR-repeat protein [Arabidopsis thaliana]... 89 3e-15 ref|NP_567414.1| putative F-box/LRR-repeat protein [Arabidopsis ... 86 2e-14 ref|NP_175384.1| F-box domain-containing protein [Arabidopsis th... 86 3e-14 >emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera] Length = 607 Score = 100 bits (249), Expect = 1e-18 Identities = 114/433 (26%), Positives = 182/433 (42%), Gaps = 48/433 (11%) Frame = -3 Query: 1475 DKISGLPDEVLVHILSLVDMKEVMHTSILSKRWRYLWRSVPSLNFNSHLWRLPNK-GDWD 1299 D IS LPDE+L HILS + K + TSILSKRWRYLW SVP L+F+ LW P+ + + Sbjct: 10 DIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLNPSTLVELE 69 Query: 1298 IRKEEFMEFVEKTLSLHDGFNVHKFSLYYYNPSDACARIHEWIALAVSRHVQHLCL---- 1131 R F FV+ L + + KF L Y + + ++ WI +A+ R VQ L L Sbjct: 70 ERIIMFQNFVDGVLRHSEVSCIKKFRLGYRD--NNLDSVYSWICIALERRVQELDLHLLI 127 Query: 1130 -GRITLLPTWLLGQVTTLELRS----------VRIPNQLPYXXXXXXXXXXXXXXLILQD 984 R+ L P + + + + S V +P+ +L Sbjct: 128 DWRVELPPMFFICKTLVVVKLSCALFLDIPTTVWLPSLKALHLKSVEYSDDDSIQKLLSG 187 Query: 983 CDYLAY---------NTFI--ISAPKLKYMRVV------------NKVCSKIKVCAPSLM 873 C L N ++ +S P LK +R+ K+ V AP+L Sbjct: 188 CPVLEELVIEREERDNQWVVNVSNPSLKILRIFFFTDGFAHPYEQEDQDYKVVVDAPNLE 247 Query: 872 LLQFIGEMYEDYSLDNLSSLVTAELRLDCHGSDFLKGRPVKKKKLRCLINFLEG-ICNVQ 696 L + +DY + +L SLV A + ++ +F + I L G I NV+ Sbjct: 248 YLSITDYLSKDYFVKDLPSLVKAFIDVEQDSEEFEESPHNGGISYHGPIYELLGRISNVK 307 Query: 695 SLTLSTYYFQNWPELFEEWEPIIFHKVKCLKLT-----DWQVDGDIGAIDKLLMCFPNIE 531 L+L+ + +++ FH + L+ +W + L PN+E Sbjct: 308 CLSLTGVTLDSLSGTIGDYKLPTFHNMTRLEFLFIGGFNWDF------LPNFLHSSPNLE 361 Query: 530 VLRFERTVMLSQKGTGSREKSGDQGSLLSV---SCMFPHLKNIEIQNLRRCDNVFNFLEF 360 L E TG + +G L+ + +C+ HLK IEI+ + D +E+ Sbjct: 362 ALVIE---------TGYTNELIPEGWLMPLQVPACLVLHLKEIEIRRIVGEDYELEAVEY 412 Query: 359 LVENTLNLESITL 321 L++N L+ +T+ Sbjct: 413 LLKNAEVLQQMTI 425 >ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thaliana] gi|332657973|gb|AEE83373.1| F-box/LRR-repeat protein [Arabidopsis thaliana] Length = 443 Score = 89.4 bits (220), Expect = 3e-15 Identities = 101/369 (27%), Positives = 158/369 (42%), Gaps = 49/369 (13%) Frame = -3 Query: 1475 DKISGLPDEVLVHILSLVDMKEVMHTSILSKRWRYLWRSVPSLNFNSHLWRLPNKGDWDI 1296 D IS LPD++ HILS + KE TS+LSK+WRYL+ VP+L+ + ++ P + + +I Sbjct: 8 DVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNP-ENETEI 66 Query: 1295 RKEEFMEFVEKTLSLHDGFNVHKFSLYYYNPSDACARIHEWIALAVSRHVQ----HLCLG 1128 FM+FV++ L+L +HKFSL + D RI WI + R V HL L Sbjct: 67 -STSFMDFVDRVLALQGNSPLHKFSLKIGDGIDP-VRIIPWINNVLERGVSDLDLHLNLE 124 Query: 1127 RITLLPT---------WL---LGQVTTLELRSVRIP------------NQLPYXXXXXXX 1020 LLP+ WL G T+++ V +P + Sbjct: 125 SEFLLPSQVYLCKTLVWLKLRFGLYPTIDVEDVHLPKLKTLYIEATHFEEHGVGLTKLLS 184 Query: 1019 XXXXXXXLILQDCDYLAYNTFIISAPKLKYMRVV----NKVCSKIKVCAPSLMLLQFIGE 852 L+L D + ++ +S P LK +R ++ + + P+L+ L+F Sbjct: 185 GCPMLEDLVLDDISWFIWDFASVSVPTLKRLRFSWQERDEFPKSVLLDTPNLVYLKFTDT 244 Query: 851 MYEDYSLDNLSSLVTAELRL-----------DCHGSDFLKGRPVKKKKLRCLINFLEGIC 705 + Y NL SLV A + L +G + + G +F+ IC Sbjct: 245 VAGKYPKVNLDSLVEAHIDLRLLKPLLINYHQGYGENDMVGNAT---------DFIMRIC 295 Query: 704 NVQSLTLSTYYFQNWPELFEEWEPI-IFHKVKCLKL-----TDWQVDGDIGAIDKLLMCF 543 NV++L LS Q L + I IF+ + L + WQ ++ LL Sbjct: 296 NVKTLYLSANTLQ---VLTYSCDAIPIFNNLTHLTIESNPRVGWQ------SVPGLLKNS 346 Query: 542 PNIEVLRFE 516 PN+E L F+ Sbjct: 347 PNLETLIFQ 355 >ref|NP_567422.1| F-box/LRR-repeat protein [Arabidopsis thaliana] gi|75245750|sp|Q8L7H1.1|FBL75_ARATH RecName: Full=F-box/LRR-repeat protein At4g14103 gi|22136642|gb|AAM91640.1| unknown protein [Arabidopsis thaliana] gi|332657972|gb|AEE83372.1| F-box/LRR-repeat protein [Arabidopsis thaliana] Length = 381 Score = 89.4 bits (220), Expect = 3e-15 Identities = 101/369 (27%), Positives = 158/369 (42%), Gaps = 49/369 (13%) Frame = -3 Query: 1475 DKISGLPDEVLVHILSLVDMKEVMHTSILSKRWRYLWRSVPSLNFNSHLWRLPNKGDWDI 1296 D IS LPD++ HILS + KE TS+LSK+WRYL+ VP+L+ + ++ P + + +I Sbjct: 8 DVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNP-ENETEI 66 Query: 1295 RKEEFMEFVEKTLSLHDGFNVHKFSLYYYNPSDACARIHEWIALAVSRHVQ----HLCLG 1128 FM+FV++ L+L +HKFSL + D RI WI + R V HL L Sbjct: 67 -STSFMDFVDRVLALQGNSPLHKFSLKIGDGIDP-VRIIPWINNVLERGVSDLDLHLNLE 124 Query: 1127 RITLLPT---------WL---LGQVTTLELRSVRIP------------NQLPYXXXXXXX 1020 LLP+ WL G T+++ V +P + Sbjct: 125 SEFLLPSQVYLCKTLVWLKLRFGLYPTIDVEDVHLPKLKTLYIEATHFEEHGVGLTKLLS 184 Query: 1019 XXXXXXXLILQDCDYLAYNTFIISAPKLKYMRVV----NKVCSKIKVCAPSLMLLQFIGE 852 L+L D + ++ +S P LK +R ++ + + P+L+ L+F Sbjct: 185 GCPMLEDLVLDDISWFIWDFASVSVPTLKRLRFSWQERDEFPKSVLLDTPNLVYLKFTDT 244 Query: 851 MYEDYSLDNLSSLVTAELRL-----------DCHGSDFLKGRPVKKKKLRCLINFLEGIC 705 + Y NL SLV A + L +G + + G +F+ IC Sbjct: 245 VAGKYPKVNLDSLVEAHIDLRLLKPLLINYHQGYGENDMVGNAT---------DFIMRIC 295 Query: 704 NVQSLTLSTYYFQNWPELFEEWEPI-IFHKVKCLKL-----TDWQVDGDIGAIDKLLMCF 543 NV++L LS Q L + I IF+ + L + WQ ++ LL Sbjct: 296 NVKTLYLSANTLQ---VLTYSCDAIPIFNNLTHLTIESNPRVGWQ------SVPGLLKNS 346 Query: 542 PNIEVLRFE 516 PN+E L F+ Sbjct: 347 PNLETLIFQ 355 >ref|NP_567414.1| putative F-box/LRR-repeat protein [Arabidopsis thaliana] gi|75318094|sp|O23257.1|FBL72_ARATH RecName: Full=Putative F-box/LRR-repeat protein At4g13960 gi|2244752|emb|CAB10175.1| hypothetical protein [Arabidopsis thaliana] gi|7268100|emb|CAB78438.1| hypothetical protein [Arabidopsis thaliana] gi|332657951|gb|AEE83351.1| putative F-box/LRR-repeat protein [Arabidopsis thaliana] Length = 434 Score = 86.3 bits (212), Expect = 2e-14 Identities = 110/403 (27%), Positives = 175/403 (43%), Gaps = 22/403 (5%) Frame = -3 Query: 1475 DKISGLPDEVLVHILSLVDMKEVMHTSILSKRWRYLWRSVPSLNFNSHLWRLPNKGD--- 1305 D +S LPDEVL HILS + KE TSILSKRWR L+ VP+L+ + ++ P +G Sbjct: 2 DHVSSLPDEVLYHILSFLTTKEAALTSILSKRWRNLFTFVPNLDIDDSVFLHPQEGKEDR 61 Query: 1304 WDIRKEEFMEFVEKTLSLHDGFNVHKFSLYYYNPSDACARIHEWIALAVSRHVQHLCLGR 1125 ++I+K FM+FV++ L+L + K SL D+ R+ WI+ A++R V Sbjct: 62 YEIQK-SFMKFVDRVLALQGNSPIKKLSLKLRTGFDS-HRVDGWISNALARGV------- 112 Query: 1124 ITLLPTWLLGQVTTLELRSVRIPNQLPYXXXXXXXXXXXXXXLILQDCDYLAY--NTFII 951 T L ++ + TL+L SVR+ + L + D + + + Sbjct: 113 -TELDLLIILNLVTLKLNSVRV-DWLAAGDIFLPMLKTLVLHSVRLCVDNVNWGGKDVNV 170 Query: 950 SAPKLKYMRVVNKVC-SKIKVCAPSLMLLQFIGEMYEDYSLDNLSSLVTAELRLDCHGSD 774 S LK + V +C V PSL+ F + DY + + +L A + L Sbjct: 171 SNASLKILTVNYNICLGTFSVDTPSLVYFCFTEYVAIDYPVVIMQNLFEARISLLVTQDQ 230 Query: 773 FLKGRP-----VKKKKLRCLIN---FLEGICNVQSLTLSTYYFQNWPELFEEWEPIIFHK 618 + R V+ + L+N ++GI NVQ + LS + E +F+ Sbjct: 231 IERARAPNIDWVEDDVVLRLVNMEKLIKGIRNVQYMYLSPNTLEVLSLCCESMP--VFNN 288 Query: 617 VKCLKLTDWQVDGDIGAIDKLLMCFPNIEVLRFERTVMLSQKGTG------SREKSGDQG 456 +K L L + G A+ LL P++E L E + G SRE+ G Sbjct: 289 LKSLTLKSHKSRG-WQAMPVLLRNCPHLETLVLEGILHHVTDKCGYACDCVSREEKG--C 345 Query: 455 SLLSVSCMFPHLKNIE--IQNLRRCDNVFNFLEFLVENTLNLE 333 SL S +K I+ + + N+ L+E + +E Sbjct: 346 SLTSCPVKVLEIKGFRGTIKEMHMIKHFVNYFPCLMETNIYIE 388 >ref|NP_175384.1| F-box domain-containing protein [Arabidopsis thaliana] gi|332194328|gb|AEE32449.1| F-box domain-containing protein [Arabidopsis thaliana] Length = 354 Score = 85.9 bits (211), Expect = 3e-14 Identities = 72/248 (29%), Positives = 118/248 (47%), Gaps = 5/248 (2%) Frame = -3 Query: 1487 ISDADKISGLPDEVLVHILSLVDMKEVMHTSILSKRWRYLWRSVPSLNFNSHLWRLPNKG 1308 + D D IS LPD +L LSL+ K + TS+LSKRWR++W PSL+F+ Sbjct: 22 LEDVDSISSLPDVILQENLSLIPTKFAIRTSVLSKRWRHVWSETPSLDFD---------- 71 Query: 1307 DWDIRKEEFMEFVEKTLSLHDGFNVHKFSLYYYNPSDACARIHEWIALAVSRHVQHLCLG 1128 D K + ++F++KTL+L+ + F L+ N + I WI A+SR+V++L L Sbjct: 72 --DCYKLD-VDFIDKTLALYRARKIMTFDLWITNGIN-LPYIDGWIKFAMSRNVENLFLS 127 Query: 1127 ---RITLLPTWLLGQVTTLELRSVRIPNQLPYXXXXXXXXXXXXXXLILQDCDYLAYNTF 957 R+ +P +L + +L +I + P L L CD L Sbjct: 128 FDFRLYDVPDYLYINSSVKQLSIAKILSGCP-----------IIESLTLHFCDQLMV-LD 175 Query: 956 IISAPKLKYMRVVNKVCSKIKVCAPSLMLLQFIGEMYEDYSLDNLSSLVTAELRLD--CH 783 + +P LK + + + +K+ +C SL E+ ++ LD + + +D Sbjct: 176 LTKSPSLKILEIHGSIWAKVDICFCSLK------EIKANFLLDTVLKCLYKLQNVDKLTF 229 Query: 782 GSDFLKGR 759 G++FLKGR Sbjct: 230 GANFLKGR 237