BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010842
         (1741 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]   100   1e-18
ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thalia...    89   3e-15
ref|NP_567422.1| F-box/LRR-repeat protein [Arabidopsis thaliana]...    89   3e-15
ref|NP_567414.1| putative F-box/LRR-repeat protein [Arabidopsis ...    86   2e-14
ref|NP_175384.1| F-box domain-containing protein [Arabidopsis th...    86   3e-14

>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score =  100 bits (249), Expect = 1e-18
 Identities = 114/433 (26%), Positives = 182/433 (42%), Gaps = 48/433 (11%)
 Frame = -3

Query: 1475 DKISGLPDEVLVHILSLVDMKEVMHTSILSKRWRYLWRSVPSLNFNSHLWRLPNK-GDWD 1299
            D IS LPDE+L HILS +  K  + TSILSKRWRYLW SVP L+F+  LW  P+   + +
Sbjct: 10   DIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLNPSTLVELE 69

Query: 1298 IRKEEFMEFVEKTLSLHDGFNVHKFSLYYYNPSDACARIHEWIALAVSRHVQHLCL---- 1131
             R   F  FV+  L   +   + KF L Y +  +    ++ WI +A+ R VQ L L    
Sbjct: 70   ERIIMFQNFVDGVLRHSEVSCIKKFRLGYRD--NNLDSVYSWICIALERRVQELDLHLLI 127

Query: 1130 -GRITLLPTWLLGQVTTLELRS----------VRIPNQLPYXXXXXXXXXXXXXXLILQD 984
              R+ L P + + +   +   S          V +P+                   +L  
Sbjct: 128  DWRVELPPMFFICKTLVVVKLSCALFLDIPTTVWLPSLKALHLKSVEYSDDDSIQKLLSG 187

Query: 983  CDYLAY---------NTFI--ISAPKLKYMRVV------------NKVCSKIKVCAPSLM 873
            C  L           N ++  +S P LK +R+                  K+ V AP+L 
Sbjct: 188  CPVLEELVIEREERDNQWVVNVSNPSLKILRIFFFTDGFAHPYEQEDQDYKVVVDAPNLE 247

Query: 872  LLQFIGEMYEDYSLDNLSSLVTAELRLDCHGSDFLKGRPVKKKKLRCLINFLEG-ICNVQ 696
             L     + +DY + +L SLV A + ++    +F +            I  L G I NV+
Sbjct: 248  YLSITDYLSKDYFVKDLPSLVKAFIDVEQDSEEFEESPHNGGISYHGPIYELLGRISNVK 307

Query: 695  SLTLSTYYFQNWPELFEEWEPIIFHKVKCLKLT-----DWQVDGDIGAIDKLLMCFPNIE 531
             L+L+     +      +++   FH +  L+       +W        +   L   PN+E
Sbjct: 308  CLSLTGVTLDSLSGTIGDYKLPTFHNMTRLEFLFIGGFNWDF------LPNFLHSSPNLE 361

Query: 530  VLRFERTVMLSQKGTGSREKSGDQGSLLSV---SCMFPHLKNIEIQNLRRCDNVFNFLEF 360
             L  E         TG   +   +G L+ +   +C+  HLK IEI+ +   D     +E+
Sbjct: 362  ALVIE---------TGYTNELIPEGWLMPLQVPACLVLHLKEIEIRRIVGEDYELEAVEY 412

Query: 359  LVENTLNLESITL 321
            L++N   L+ +T+
Sbjct: 413  LLKNAEVLQQMTI 425


>ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
            gi|332657973|gb|AEE83373.1| F-box/LRR-repeat protein
            [Arabidopsis thaliana]
          Length = 443

 Score = 89.4 bits (220), Expect = 3e-15
 Identities = 101/369 (27%), Positives = 158/369 (42%), Gaps = 49/369 (13%)
 Frame = -3

Query: 1475 DKISGLPDEVLVHILSLVDMKEVMHTSILSKRWRYLWRSVPSLNFNSHLWRLPNKGDWDI 1296
            D IS LPD++  HILS +  KE   TS+LSK+WRYL+  VP+L+ +  ++  P + + +I
Sbjct: 8    DVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNP-ENETEI 66

Query: 1295 RKEEFMEFVEKTLSLHDGFNVHKFSLYYYNPSDACARIHEWIALAVSRHVQ----HLCLG 1128
                FM+FV++ L+L     +HKFSL   +  D   RI  WI   + R V     HL L 
Sbjct: 67   -STSFMDFVDRVLALQGNSPLHKFSLKIGDGIDP-VRIIPWINNVLERGVSDLDLHLNLE 124

Query: 1127 RITLLPT---------WL---LGQVTTLELRSVRIP------------NQLPYXXXXXXX 1020
               LLP+         WL    G   T+++  V +P             +          
Sbjct: 125  SEFLLPSQVYLCKTLVWLKLRFGLYPTIDVEDVHLPKLKTLYIEATHFEEHGVGLTKLLS 184

Query: 1019 XXXXXXXLILQDCDYLAYNTFIISAPKLKYMRVV----NKVCSKIKVCAPSLMLLQFIGE 852
                   L+L D  +  ++   +S P LK +R      ++    + +  P+L+ L+F   
Sbjct: 185  GCPMLEDLVLDDISWFIWDFASVSVPTLKRLRFSWQERDEFPKSVLLDTPNLVYLKFTDT 244

Query: 851  MYEDYSLDNLSSLVTAELRL-----------DCHGSDFLKGRPVKKKKLRCLINFLEGIC 705
            +   Y   NL SLV A + L             +G + + G            +F+  IC
Sbjct: 245  VAGKYPKVNLDSLVEAHIDLRLLKPLLINYHQGYGENDMVGNAT---------DFIMRIC 295

Query: 704  NVQSLTLSTYYFQNWPELFEEWEPI-IFHKVKCLKL-----TDWQVDGDIGAIDKLLMCF 543
            NV++L LS    Q    L    + I IF+ +  L +       WQ      ++  LL   
Sbjct: 296  NVKTLYLSANTLQ---VLTYSCDAIPIFNNLTHLTIESNPRVGWQ------SVPGLLKNS 346

Query: 542  PNIEVLRFE 516
            PN+E L F+
Sbjct: 347  PNLETLIFQ 355


>ref|NP_567422.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
            gi|75245750|sp|Q8L7H1.1|FBL75_ARATH RecName:
            Full=F-box/LRR-repeat protein At4g14103
            gi|22136642|gb|AAM91640.1| unknown protein [Arabidopsis
            thaliana] gi|332657972|gb|AEE83372.1| F-box/LRR-repeat
            protein [Arabidopsis thaliana]
          Length = 381

 Score = 89.4 bits (220), Expect = 3e-15
 Identities = 101/369 (27%), Positives = 158/369 (42%), Gaps = 49/369 (13%)
 Frame = -3

Query: 1475 DKISGLPDEVLVHILSLVDMKEVMHTSILSKRWRYLWRSVPSLNFNSHLWRLPNKGDWDI 1296
            D IS LPD++  HILS +  KE   TS+LSK+WRYL+  VP+L+ +  ++  P + + +I
Sbjct: 8    DVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNP-ENETEI 66

Query: 1295 RKEEFMEFVEKTLSLHDGFNVHKFSLYYYNPSDACARIHEWIALAVSRHVQ----HLCLG 1128
                FM+FV++ L+L     +HKFSL   +  D   RI  WI   + R V     HL L 
Sbjct: 67   -STSFMDFVDRVLALQGNSPLHKFSLKIGDGIDP-VRIIPWINNVLERGVSDLDLHLNLE 124

Query: 1127 RITLLPT---------WL---LGQVTTLELRSVRIP------------NQLPYXXXXXXX 1020
               LLP+         WL    G   T+++  V +P             +          
Sbjct: 125  SEFLLPSQVYLCKTLVWLKLRFGLYPTIDVEDVHLPKLKTLYIEATHFEEHGVGLTKLLS 184

Query: 1019 XXXXXXXLILQDCDYLAYNTFIISAPKLKYMRVV----NKVCSKIKVCAPSLMLLQFIGE 852
                   L+L D  +  ++   +S P LK +R      ++    + +  P+L+ L+F   
Sbjct: 185  GCPMLEDLVLDDISWFIWDFASVSVPTLKRLRFSWQERDEFPKSVLLDTPNLVYLKFTDT 244

Query: 851  MYEDYSLDNLSSLVTAELRL-----------DCHGSDFLKGRPVKKKKLRCLINFLEGIC 705
            +   Y   NL SLV A + L             +G + + G            +F+  IC
Sbjct: 245  VAGKYPKVNLDSLVEAHIDLRLLKPLLINYHQGYGENDMVGNAT---------DFIMRIC 295

Query: 704  NVQSLTLSTYYFQNWPELFEEWEPI-IFHKVKCLKL-----TDWQVDGDIGAIDKLLMCF 543
            NV++L LS    Q    L    + I IF+ +  L +       WQ      ++  LL   
Sbjct: 296  NVKTLYLSANTLQ---VLTYSCDAIPIFNNLTHLTIESNPRVGWQ------SVPGLLKNS 346

Query: 542  PNIEVLRFE 516
            PN+E L F+
Sbjct: 347  PNLETLIFQ 355


>ref|NP_567414.1| putative F-box/LRR-repeat protein [Arabidopsis thaliana]
            gi|75318094|sp|O23257.1|FBL72_ARATH RecName:
            Full=Putative F-box/LRR-repeat protein At4g13960
            gi|2244752|emb|CAB10175.1| hypothetical protein
            [Arabidopsis thaliana] gi|7268100|emb|CAB78438.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|332657951|gb|AEE83351.1| putative F-box/LRR-repeat
            protein [Arabidopsis thaliana]
          Length = 434

 Score = 86.3 bits (212), Expect = 2e-14
 Identities = 110/403 (27%), Positives = 175/403 (43%), Gaps = 22/403 (5%)
 Frame = -3

Query: 1475 DKISGLPDEVLVHILSLVDMKEVMHTSILSKRWRYLWRSVPSLNFNSHLWRLPNKGD--- 1305
            D +S LPDEVL HILS +  KE   TSILSKRWR L+  VP+L+ +  ++  P +G    
Sbjct: 2    DHVSSLPDEVLYHILSFLTTKEAALTSILSKRWRNLFTFVPNLDIDDSVFLHPQEGKEDR 61

Query: 1304 WDIRKEEFMEFVEKTLSLHDGFNVHKFSLYYYNPSDACARIHEWIALAVSRHVQHLCLGR 1125
            ++I+K  FM+FV++ L+L     + K SL      D+  R+  WI+ A++R V       
Sbjct: 62   YEIQK-SFMKFVDRVLALQGNSPIKKLSLKLRTGFDS-HRVDGWISNALARGV------- 112

Query: 1124 ITLLPTWLLGQVTTLELRSVRIPNQLPYXXXXXXXXXXXXXXLILQDCDYLAY--NTFII 951
             T L   ++  + TL+L SVR+ + L                 +    D + +      +
Sbjct: 113  -TELDLLIILNLVTLKLNSVRV-DWLAAGDIFLPMLKTLVLHSVRLCVDNVNWGGKDVNV 170

Query: 950  SAPKLKYMRVVNKVC-SKIKVCAPSLMLLQFIGEMYEDYSLDNLSSLVTAELRLDCHGSD 774
            S   LK + V   +C     V  PSL+   F   +  DY +  + +L  A + L      
Sbjct: 171  SNASLKILTVNYNICLGTFSVDTPSLVYFCFTEYVAIDYPVVIMQNLFEARISLLVTQDQ 230

Query: 773  FLKGRP-----VKKKKLRCLIN---FLEGICNVQSLTLSTYYFQNWPELFEEWEPIIFHK 618
              + R      V+   +  L+N    ++GI NVQ + LS    +      E     +F+ 
Sbjct: 231  IERARAPNIDWVEDDVVLRLVNMEKLIKGIRNVQYMYLSPNTLEVLSLCCESMP--VFNN 288

Query: 617  VKCLKLTDWQVDGDIGAIDKLLMCFPNIEVLRFERTVMLSQKGTG------SREKSGDQG 456
            +K L L   +  G   A+  LL   P++E L  E  +       G      SRE+ G   
Sbjct: 289  LKSLTLKSHKSRG-WQAMPVLLRNCPHLETLVLEGILHHVTDKCGYACDCVSREEKG--C 345

Query: 455  SLLSVSCMFPHLKNIE--IQNLRRCDNVFNFLEFLVENTLNLE 333
            SL S       +K     I+ +    +  N+   L+E  + +E
Sbjct: 346  SLTSCPVKVLEIKGFRGTIKEMHMIKHFVNYFPCLMETNIYIE 388


>ref|NP_175384.1| F-box domain-containing protein [Arabidopsis thaliana]
            gi|332194328|gb|AEE32449.1| F-box domain-containing
            protein [Arabidopsis thaliana]
          Length = 354

 Score = 85.9 bits (211), Expect = 3e-14
 Identities = 72/248 (29%), Positives = 118/248 (47%), Gaps = 5/248 (2%)
 Frame = -3

Query: 1487 ISDADKISGLPDEVLVHILSLVDMKEVMHTSILSKRWRYLWRSVPSLNFNSHLWRLPNKG 1308
            + D D IS LPD +L   LSL+  K  + TS+LSKRWR++W   PSL+F+          
Sbjct: 22   LEDVDSISSLPDVILQENLSLIPTKFAIRTSVLSKRWRHVWSETPSLDFD---------- 71

Query: 1307 DWDIRKEEFMEFVEKTLSLHDGFNVHKFSLYYYNPSDACARIHEWIALAVSRHVQHLCLG 1128
              D  K + ++F++KTL+L+    +  F L+  N  +    I  WI  A+SR+V++L L 
Sbjct: 72   --DCYKLD-VDFIDKTLALYRARKIMTFDLWITNGIN-LPYIDGWIKFAMSRNVENLFLS 127

Query: 1127 ---RITLLPTWLLGQVTTLELRSVRIPNQLPYXXXXXXXXXXXXXXLILQDCDYLAYNTF 957
               R+  +P +L    +  +L   +I +  P               L L  CD L     
Sbjct: 128  FDFRLYDVPDYLYINSSVKQLSIAKILSGCP-----------IIESLTLHFCDQLMV-LD 175

Query: 956  IISAPKLKYMRVVNKVCSKIKVCAPSLMLLQFIGEMYEDYSLDNLSSLVTAELRLD--CH 783
            +  +P LK + +   + +K+ +C  SL       E+  ++ LD +   +     +D    
Sbjct: 176  LTKSPSLKILEIHGSIWAKVDICFCSLK------EIKANFLLDTVLKCLYKLQNVDKLTF 229

Query: 782  GSDFLKGR 759
            G++FLKGR
Sbjct: 230  GANFLKGR 237